RNA–Protein interactions for RNA: ENST00000447216.2

TRAPPC4-203, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 980 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-203ENST00000447216 KBTBD4Q9NVX7 518 aa20.01■□□□□ 0.79
TRAPPC4-203ENST00000447216 NRCAMQ92823 1304 aa20.01■□□□□ 0.79
TRAPPC4-203ENST00000447216 ARVCFO00192 962 aa20■□□□□ 0.79
TRAPPC4-203ENST00000447216 TREHO43280 583 aa20■□□□□ 0.79
TRAPPC4-203ENST00000447216 MBD3O95983 291 aa20■□□□□ 0.79
TRAPPC4-203ENST00000447216 PRR29P0C7W0 189 aa20■□□□□ 0.79
TRAPPC4-203ENST00000447216 HOXC8P31273 242 aa20■□□□□ 0.79
TRAPPC4-203ENST00000447216 POLGP54098 1239 aaPredicted RBP20■□□□□ 0.79
TRAPPC4-203ENST00000447216 ADAM17P78536 824 aa20■□□□□ 0.79
TRAPPC4-203ENST00000447216 CACNB1Q02641 598 aaPredicted RBP20■□□□□ 0.79
TRAPPC4-203ENST00000447216 EMC2Q15006 297 aa20■□□□□ 0.79
TRAPPC4-203ENST00000447216 MTHFD1LQ6UB35 978 aa20■□□□□ 0.79
TRAPPC4-203ENST00000447216 DYMQ7RTS9 669 aa20■□□□□ 0.79
TRAPPC4-203ENST00000447216 SESTD1Q86VW0 696 aa20■□□□□ 0.79
TRAPPC4-203ENST00000447216 TNS4Q8IZW8 715 aa20■□□□□ 0.79
TRAPPC4-203ENST00000447216 LRRC71Q8N4P6 559 aa20■□□□□ 0.79
TRAPPC4-203ENST00000447216 SLC43A3Q8NBI5 491 aa20■□□□□ 0.79
TRAPPC4-203ENST00000447216 BLZF1Q9H2G9 400 aa20■□□□□ 0.79
TRAPPC4-203ENST00000447216 TNMDQ9H2S6 317 aa20■□□□□ 0.79
TRAPPC4-203ENST00000447216 DHX33Q9H6R0 707 aaKnown RBP20■□□□□ 0.79
TRAPPC4-203ENST00000447216 MAGEF1Q9HAY2 307 aa20■□□□□ 0.79
TRAPPC4-203ENST00000447216 XPNPEP1Q9NQW7 623 aa20■□□□□ 0.79
TRAPPC4-203ENST00000447216 MAFO75444 373 aaPredicted RBP19.99■□□□□ 0.79
TRAPPC4-203ENST00000447216 PTMSP20962 102 aa19.99■□□□□ 0.79
TRAPPC4-203ENST00000447216 RFC5P40937 340 aa19.99■□□□□ 0.79
TRAPPC4-203ENST00000447216 CLCN3P51790 818 aa19.99■□□□□ 0.79
TRAPPC4-203ENST00000447216 SLC39A5Q6ZMH5 540 aa19.99■□□□□ 0.79
TRAPPC4-203ENST00000447216 RUFY4Q6ZNE9 571 aa19.99■□□□□ 0.79
TRAPPC4-203ENST00000447216 SH3RF1Q7Z6J0 888 aa19.99■□□□□ 0.79
TRAPPC4-203ENST00000447216 TIGD1Q96MW7 591 aa19.99■□□□□ 0.79
TRAPPC4-203ENST00000447216 SUGCTQ9HAC7 445 aa19.99■□□□□ 0.79
TRAPPC4-203ENST00000447216 ATP6V0A4Q9HBG4 840 aa19.99■□□□□ 0.79
TRAPPC4-203ENST00000447216 GPRC5CQ9NQ84 441 aa19.99■□□□□ 0.79
TRAPPC4-203ENST00000447216 PDLIM7Q9NR12 457 aa19.99■□□□□ 0.79
TRAPPC4-203ENST00000447216 TRMT13Q9NUP7 481 aaKnown RBP19.99■□□□□ 0.79
TRAPPC4-203ENST00000447216 TUBE1Q9UJT0 475 aa19.99■□□□□ 0.79
TRAPPC4-203ENST00000447216 CCDC85CA6NKD9 419 aa19.98■□□□□ 0.79
TRAPPC4-203ENST00000447216 DGAT1O75907 488 aa19.98■□□□□ 0.79
TRAPPC4-203ENST00000447216 KRT18P05783 430 aaKnown RBP19.98■□□□□ 0.79
TRAPPC4-203ENST00000447216 GNAT1P11488 350 aa19.98■□□□□ 0.79
TRAPPC4-203ENST00000447216 CYP2C9P11712 490 aa19.98■□□□□ 0.79
TRAPPC4-203ENST00000447216 CAPN2P17655 700 aa19.98■□□□□ 0.79
TRAPPC4-203ENST00000447216 CDK7P50613 346 aa19.98■□□□□ 0.79
TRAPPC4-203ENST00000447216 DRP2Q13474 957 aa19.98■□□□□ 0.79
TRAPPC4-203ENST00000447216 CUL4BQ13620 913 aa19.98■□□□□ 0.79
TRAPPC4-203ENST00000447216 EFCAB12Q6NXP0 572 aa19.98■□□□□ 0.79
TRAPPC4-203ENST00000447216 NECAB2Q7Z6G3 386 aa19.98■□□□□ 0.79
TRAPPC4-203ENST00000447216 METTL13Q8N6R0 699 aa19.98■□□□□ 0.79
TRAPPC4-203ENST00000447216 SLC7A3Q8WY07 619 aa19.98■□□□□ 0.79
TRAPPC4-203ENST00000447216 DDX12PQ92771 950 aa19.98■□□□□ 0.79
TRAPPC4-203ENST00000447216 ERCC4Q92889 916 aaPredicted RBP19.98■□□□□ 0.79
TRAPPC4-203ENST00000447216 TMEM143Q96AN5 459 aa19.98■□□□□ 0.79
TRAPPC4-203ENST00000447216 TRPV6Q9H1D0 765 aa19.98■□□□□ 0.79
TRAPPC4-203ENST00000447216 PPME1Q9Y570 386 aa19.98■□□□□ 0.79
TRAPPC4-203ENST00000447216 IGKV6-21A0A0C4DH24 114 aa19.97■□□□□ 0.79
TRAPPC4-203ENST00000447216 MBLAC1A4D2B0 266 aaPredicted RBP19.97■□□□□ 0.79
TRAPPC4-203ENST00000447216 RSPH10B2B2RC85 870 aa19.97■□□□□ 0.79
TRAPPC4-203ENST00000447216 MAGEB2O15479 319 aa19.97■□□□□ 0.79
TRAPPC4-203ENST00000447216 HIP1RO75146 1068 aa19.97■□□□□ 0.79
TRAPPC4-203ENST00000447216 RSPH10BP0C881 870 aa19.97■□□□□ 0.79
TRAPPC4-203ENST00000447216 PTPN11Q06124 597 aaPredicted RBP19.97■□□□□ 0.79
TRAPPC4-203ENST00000447216 MKRN4PQ13434 485 aaPredicted RBP19.97■□□□□ 0.79
TRAPPC4-203ENST00000447216 PNOCQ13519 176 aa19.97■□□□□ 0.79
TRAPPC4-203ENST00000447216 CAMK4Q16566 473 aa19.97■□□□□ 0.79
TRAPPC4-203ENST00000447216 PTGISQ16647 500 aa19.97■□□□□ 0.79
TRAPPC4-203ENST00000447216 FAM102BQ5T8I3 360 aa19.97■□□□□ 0.79
TRAPPC4-203ENST00000447216 DNAJC19Q96DA6 116 aa19.97■□□□□ 0.79
TRAPPC4-203ENST00000447216 CTAGE1Q96RT6 745 aa19.97■□□□□ 0.79
TRAPPC4-203ENST00000447216 REEP2Q9BRK0 252 aa19.97■□□□□ 0.79
TRAPPC4-203ENST00000447216 TRIM9Q9C026 710 aa19.97■□□□□ 0.79
TRAPPC4-203ENST00000447216 FAM49AQ9H0Q0 323 aaPredicted RBP19.97■□□□□ 0.79
TRAPPC4-203ENST00000447216 CLSTN2Q9H4D0 955 aa19.97■□□□□ 0.79
TRAPPC4-203ENST00000447216 GTPBP6O43824 516 aaPredicted RBP19.96■□□□□ 0.79
TRAPPC4-203ENST00000447216 B4GALT4O60513 344 aa19.96■□□□□ 0.79
TRAPPC4-203ENST00000447216 GUCY2CP25092 1073 aa19.96■□□□□ 0.79
TRAPPC4-203ENST00000447216 ASIC1P78348 528 aa19.96■□□□□ 0.79
TRAPPC4-203ENST00000447216 MDM2Q00987 491 aaPredicted RBP19.96■□□□□ 0.79
TRAPPC4-203ENST00000447216 AMPD3Q01432 767 aa19.96■□□□□ 0.79
TRAPPC4-203ENST00000447216 MAPK7Q13164 816 aa19.96■□□□□ 0.79
TRAPPC4-203ENST00000447216 GIT2Q14161 759 aa19.96■□□□□ 0.79
TRAPPC4-203ENST00000447216 POSTNQ15063 836 aa19.96■□□□□ 0.79
TRAPPC4-203ENST00000447216 TRIM60Q495X7 471 aa19.96■□□□□ 0.79
TRAPPC4-203ENST00000447216 KANK3Q6NY19 840 aa19.96■□□□□ 0.79
TRAPPC4-203ENST00000447216 DAW1Q8N136 415 aa19.96■□□□□ 0.79
TRAPPC4-203ENST00000447216 LINC01465Q8N7H1 131 aa19.96■□□□□ 0.79
TRAPPC4-203ENST00000447216 MCPH1Q8NEM0 835 aa19.96■□□□□ 0.79
TRAPPC4-203ENST00000447216 WNT8BQ93098 351 aa19.96■□□□□ 0.79
TRAPPC4-203ENST00000447216 C7orf25Q9BPX7 421 aa19.96■□□□□ 0.79
TRAPPC4-203ENST00000447216 POLR3FQ9H1D9 316 aaPredicted RBP19.96■□□□□ 0.79
TRAPPC4-203ENST00000447216 PCDHA2Q9Y5H9 948 aa19.96■□□□□ 0.79
TRAPPC4-203ENST00000447216 SFI1A8K8P3 1242 aa19.95■□□□□ 0.78
TRAPPC4-203ENST00000447216 PQBP1O60828 265 aaKnown RBP19.95■□□□□ 0.78
TRAPPC4-203ENST00000447216 LRRC26Q2I0M4 334 aa19.95■□□□□ 0.78
TRAPPC4-203ENST00000447216 UBE2Q1Q7Z7E8 422 aa19.95■□□□□ 0.78
TRAPPC4-203ENST00000447216 RETREG2Q8NC44 543 aa19.95■□□□□ 0.78
TRAPPC4-203ENST00000447216 JPH2Q9BR39 696 aaPredicted RBP19.95■□□□□ 0.78
TRAPPC4-203ENST00000447216 LRRC27Q9C0I9 530 aa19.95■□□□□ 0.78
TRAPPC4-203ENST00000447216 NUP62CLQ9H1M0 184 aa19.95■□□□□ 0.78
TRAPPC4-203ENST00000447216 ZHX3Q9H4I2 956 aa19.95■□□□□ 0.78
TRAPPC4-203ENST00000447216 KCND2Q9NZV8 630 aa19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms