RNA–Protein interactions for RNA: ENST00000444609.1

HDAC8-215, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 607 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-215ENST00000444609 NELL2Q99435 816 aa11.88□□□□□ -0.51
HDAC8-215ENST00000444609 PDCD2LQ9BRP1 358 aa11.88□□□□□ -0.51
HDAC8-215ENST00000444609 SCNM1Q9BWG6 230 aa11.88□□□□□ -0.51
HDAC8-215ENST00000444609 TMEM117Q9H0C3 514 aa11.88□□□□□ -0.51
HDAC8-215ENST00000444609 TMEM161AQ9NX61 479 aa11.88□□□□□ -0.51
HDAC8-215ENST00000444609 TRPV2Q9Y5S1 764 aa11.88□□□□□ -0.51
HDAC8-215ENST00000444609 NUMBLQ9Y6R0 609 aa11.88□□□□□ -0.51
HDAC8-215ENST00000444609 LAMA5O15230 3695 aa11.88□□□□□ -0.51
HDAC8-215ENST00000444609 IGSF10Q6WRI0 2623 aa11.88□□□□□ -0.51
HDAC8-215ENST00000444609 SPDYE4A6NLX3 237 aa11.87□□□□□ -0.51
HDAC8-215ENST00000444609 NCAM2O15394 837 aa11.87□□□□□ -0.51
HDAC8-215ENST00000444609 HRO43593 1189 aa11.87□□□□□ -0.51
HDAC8-215ENST00000444609 LAMP2P13473 410 aa11.87□□□□□ -0.51
HDAC8-215ENST00000444609 CD72P21854 359 aa11.87□□□□□ -0.51
HDAC8-215ENST00000444609 NFX1Q12986 1120 aaKnown RBP11.87□□□□□ -0.51
HDAC8-215ENST00000444609 MTAPQ13126 283 aa11.87□□□□□ -0.51
HDAC8-215ENST00000444609 PPFIA1Q13136 1202 aa11.87□□□□□ -0.51
HDAC8-215ENST00000444609 MAPK8IP2Q13387 824 aaPredicted RBP11.87□□□□□ -0.51
HDAC8-215ENST00000444609 SF3A2Q15428 464 aaKnown RBP11.87□□□□□ -0.51
HDAC8-215ENST00000444609 TMEM266Q2M3C6 531 aa11.87□□□□□ -0.51
HDAC8-215ENST00000444609 UTP14CQ5TAP6 766 aaKnown RBP11.87□□□□□ -0.51
HDAC8-215ENST00000444609 ZSCAN25Q6NSZ9 544 aa11.87□□□□□ -0.51
HDAC8-215ENST00000444609 METTL7BQ6UX53 244 aa11.87□□□□□ -0.51
HDAC8-215ENST00000444609 MAMSTRQ6ZN01 415 aa11.87□□□□□ -0.51
HDAC8-215ENST00000444609 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.87□□□□□ -0.51
HDAC8-215ENST00000444609 ERC1Q8IUD2 1116 aa11.87□□□□□ -0.51
HDAC8-215ENST00000444609 VPS52Q8N1B4 723 aa11.87□□□□□ -0.51
HDAC8-215ENST00000444609 C12orf50Q8NA57 414 aaPredicted RBP11.87□□□□□ -0.51
HDAC8-215ENST00000444609 CMASQ8NFW8 434 aaPredicted RBP11.87□□□□□ -0.51
HDAC8-215ENST00000444609 ADAM2Q99965 735 aa11.87□□□□□ -0.51
HDAC8-215ENST00000444609 RPP25Q9BUL9 199 aaKnown RBP11.87□□□□□ -0.51
HDAC8-215ENST00000444609 RHOBTB2Q9BYZ6 727 aa11.87□□□□□ -0.51
HDAC8-215ENST00000444609 ZBP1Q9H171 429 aa11.87□□□□□ -0.51
HDAC8-215ENST00000444609 BOLA2Q9H3K6 86 aa11.87□□□□□ -0.51
HDAC8-215ENST00000444609 ELAC1Q9H777 363 aaKnown RBP11.87□□□□□ -0.51
HDAC8-215ENST00000444609 IL1RAPL2Q9NP60 686 aa11.87□□□□□ -0.51
HDAC8-215ENST00000444609 ABCB11O95342 1321 aa11.86□□□□□ -0.51
HDAC8-215ENST00000444609 KIAA1217Q5T5P2 1943 aa11.86□□□□□ -0.51
HDAC8-215ENST00000444609 TSPY2A6NKD2 308 aa11.86□□□□□ -0.51
HDAC8-215ENST00000444609 GIPC1O14908 333 aa11.86□□□□□ -0.51
HDAC8-215ENST00000444609 SLC3A2P08195 630 aaKnown RBP11.86□□□□□ -0.51
HDAC8-215ENST00000444609 CTSAP10619 480 aa11.86□□□□□ -0.51
HDAC8-215ENST00000444609 NOVA1P51513 510 aaKnown RBP11.86□□□□□ -0.51
HDAC8-215ENST00000444609 FZD5Q13467 585 aa11.86□□□□□ -0.51
HDAC8-215ENST00000444609 GRIK4Q16099 956 aa11.86□□□□□ -0.51
HDAC8-215ENST00000444609 CYP26C1Q6V0L0 522 aa11.86□□□□□ -0.51
HDAC8-215ENST00000444609 LRRC43Q8N309 656 aa11.86□□□□□ -0.51
HDAC8-215ENST00000444609 CELF4Q9BZC1 486 aaKnown RBP11.86□□□□□ -0.51
HDAC8-215ENST00000444609 FAM49AQ9H0Q0 323 aaPredicted RBP11.86□□□□□ -0.51
HDAC8-215ENST00000444609 TELO2Q9Y4R8 837 aa11.86□□□□□ -0.51
HDAC8-215ENST00000444609 CLUHO75153 1309 aa11.86□□□□□ -0.51
HDAC8-215ENST00000444609 DENND3A2RUS2 1198 aa11.85□□□□□ -0.51
HDAC8-215ENST00000444609 M0QZ92 97 aa11.85□□□□□ -0.51
HDAC8-215ENST00000444609 PDHBP11177 359 aa11.85□□□□□ -0.51
HDAC8-215ENST00000444609 TARSP26639 723 aaKnown RBP11.85□□□□□ -0.51
HDAC8-215ENST00000444609 CLCN4P51793 760 aa11.85□□□□□ -0.51
HDAC8-215ENST00000444609 SLFN5Q08AF3 891 aa11.85□□□□□ -0.51
HDAC8-215ENST00000444609 ZNF543Q08ER8 600 aa11.85□□□□□ -0.51
HDAC8-215ENST00000444609 ZNF252P-AS1Q0IIN9 211 aa11.85□□□□□ -0.51
HDAC8-215ENST00000444609 TMEM62Q0P6H9 643 aa11.85□□□□□ -0.51
HDAC8-215ENST00000444609 COL28A1Q2UY09 1125 aa11.85□□□□□ -0.51
HDAC8-215ENST00000444609 CYFIP1Q7L576 1253 aa11.85□□□□□ -0.51
HDAC8-215ENST00000444609 IFNL3Q8IZI9 196 aa11.85□□□□□ -0.51
HDAC8-215ENST00000444609 ST13P5Q8NFI4 369 aaPredicted RBP11.85□□□□□ -0.51
HDAC8-215ENST00000444609 CLUAP1Q96AJ1 413 aa11.85□□□□□ -0.51
HDAC8-215ENST00000444609 ZBTB10Q96DT7 871 aa11.85□□□□□ -0.51
HDAC8-215ENST00000444609 RNF19AQ9NV58 838 aa11.85□□□□□ -0.51
HDAC8-215ENST00000444609 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.85□□□□□ -0.51
HDAC8-215ENST00000444609 PATJQ8NI35 1801 aa11.85□□□□□ -0.51
HDAC8-215ENST00000444609 KDM3AQ9Y4C1 1321 aa11.85□□□□□ -0.51
HDAC8-215ENST00000444609 COL4A3Q01955 1670 aa11.84□□□□□ -0.51
HDAC8-215ENST00000444609 CCDC195A0A1B0GUA6 201 aa11.84□□□□□ -0.51
HDAC8-215ENST00000444609 PATL2C9JE40 543 aaKnown RBP11.84□□□□□ -0.51
HDAC8-215ENST00000444609 APPP05067 770 aa11.84□□□□□ -0.51
HDAC8-215ENST00000444609 ZNF806P0C7X5 589 aa11.84□□□□□ -0.51
HDAC8-215ENST00000444609 TOP1P11387 765 aaKnown RBP11.84□□□□□ -0.51
HDAC8-215ENST00000444609 CNR2P34972 360 aa11.84□□□□□ -0.51
HDAC8-215ENST00000444609 POLGP54098 1239 aaPredicted RBP11.84□□□□□ -0.51
HDAC8-215ENST00000444609 C19orf57Q0VDD7 668 aa11.84□□□□□ -0.51
HDAC8-215ENST00000444609 NEDD9Q14511 834 aa11.84□□□□□ -0.51
HDAC8-215ENST00000444609 PPP2R5DQ14738 602 aa11.84□□□□□ -0.51
HDAC8-215ENST00000444609 STOX1Q6ZVD7 989 aa11.84□□□□□ -0.51
HDAC8-215ENST00000444609 PROSER1Q86XN7 944 aa11.84□□□□□ -0.51
HDAC8-215ENST00000444609 OSBP2Q969R2 916 aa11.84□□□□□ -0.51
HDAC8-215ENST00000444609 ZFP91Q96JP5 570 aaPredicted RBP11.84□□□□□ -0.51
HDAC8-215ENST00000444609 HNRNPABQ99729 332 aaKnown RBP11.84□□□□□ -0.51
HDAC8-215ENST00000444609 TMEM47Q9BQJ4 181 aa11.84□□□□□ -0.51
HDAC8-215ENST00000444609 FAM217BQ9NTX9 383 aaPredicted RBP11.84□□□□□ -0.51
HDAC8-215ENST00000444609 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.84□□□□□ -0.51
HDAC8-215ENST00000444609 FNDC1Q4ZHG4 1894 aaPredicted RBP11.84□□□□□ -0.51
HDAC8-215ENST00000444609 NT5C1B-RDH14C9J2C7 533 aa11.83□□□□□ -0.52
HDAC8-215ENST00000444609 HOXA2O43364 376 aa11.83□□□□□ -0.52
HDAC8-215ENST00000444609 CAPNS1P04632 268 aa11.83□□□□□ -0.52
HDAC8-215ENST00000444609 ATP5JP18859 108 aa11.83□□□□□ -0.52
HDAC8-215ENST00000444609 GNAT2P19087 354 aa11.83□□□□□ -0.52
HDAC8-215ENST00000444609 ALDH7A1P49419 539 aaKnown RBP11.83□□□□□ -0.52
HDAC8-215ENST00000444609 METAP2P50579 478 aaKnown RBP eCLIP11.83□□□□□ -0.52
HDAC8-215ENST00000444609 HSD17B4P51659 736 aa11.83□□□□□ -0.52
HDAC8-215ENST00000444609 PGM5Q15124 567 aa11.83□□□□□ -0.52
HDAC8-215ENST00000444609 LARP1BQ659C4 914 aaKnown RBP11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms