RNA–Protein interactions for RNA: ENST00000444508.5

SMARCAL1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 2

Gene SMARCAL1, Length 711 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-209ENST00000444508 TSHZ1Q6ZSZ6 1077 aa19.5■□□□□ 0.71
SMARCAL1-209ENST00000444508 CATSPER3Q86XQ3 398 aa19.5■□□□□ 0.71
SMARCAL1-209ENST00000444508 LINC01465Q8N7H1 131 aa19.5■□□□□ 0.71
SMARCAL1-209ENST00000444508 IGSF22Q8N9C0 903 aa19.5■□□□□ 0.71
SMARCAL1-209ENST00000444508 USP38Q8NB14 1042 aa19.5■□□□□ 0.71
SMARCAL1-209ENST00000444508 LRCH3Q96II8 777 aa19.5■□□□□ 0.71
SMARCAL1-209ENST00000444508 CEP89Q96ST8 783 aa19.5■□□□□ 0.71
SMARCAL1-209ENST00000444508 ANKEF1Q9NU02 776 aa19.5■□□□□ 0.71
SMARCAL1-209ENST00000444508 SQORQ9Y6N5 450 aa19.5■□□□□ 0.71
SMARCAL1-209ENST00000444508 MED24O75448 989 aa19.49■□□□□ 0.71
SMARCAL1-209ENST00000444508 SPATA31C1P0DKV0 1188 aa19.49■□□□□ 0.71
SMARCAL1-209ENST00000444508 ATP2A2P16615 1042 aaKnown RBP19.49■□□□□ 0.71
SMARCAL1-209ENST00000444508 RPA1P27694 616 aa19.49■□□□□ 0.71
SMARCAL1-209ENST00000444508 CCT6AP40227 531 aaKnown RBP19.49■□□□□ 0.71
SMARCAL1-209ENST00000444508 SCLT1Q96NL6 688 aa19.49■□□□□ 0.71
SMARCAL1-209ENST00000444508 NACC1Q96RE7 527 aa19.49■□□□□ 0.71
SMARCAL1-209ENST00000444508 PPP1R16BQ96T49 567 aa19.49■□□□□ 0.71
SMARCAL1-209ENST00000444508 SLC9A7Q96T83 725 aa19.49■□□□□ 0.71
SMARCAL1-209ENST00000444508 LAMA2P24043 3122 aaKnown RBP19.49■□□□□ 0.71
SMARCAL1-209ENST00000444508 IGKV6-21A0A0C4DH24 114 aa19.48■□□□□ 0.71
SMARCAL1-209ENST00000444508 ZBTB39O15060 712 aa19.48■□□□□ 0.71
SMARCAL1-209ENST00000444508 XRCC6P12956 609 aaKnown RBP eCLIP19.48■□□□□ 0.71
SMARCAL1-209ENST00000444508 MUTP22033 750 aa19.48■□□□□ 0.71
SMARCAL1-209ENST00000444508 CRYBB1P53674 252 aaPredicted RBP19.48■□□□□ 0.71
SMARCAL1-209ENST00000444508 WDR5P61964 334 aaKnown RBP19.48■□□□□ 0.71
SMARCAL1-209ENST00000444508 CDC42EP1Q00587 391 aa19.48■□□□□ 0.71
SMARCAL1-209ENST00000444508 PAK2Q13177 524 aa19.48■□□□□ 0.71
SMARCAL1-209ENST00000444508 SF3A1Q15459 793 aaKnown RBP19.48■□□□□ 0.71
SMARCAL1-209ENST00000444508 KIZQ2M2Z5 673 aa19.48■□□□□ 0.71
SMARCAL1-209ENST00000444508 TCTN1Q2MV58 587 aa19.48■□□□□ 0.71
SMARCAL1-209ENST00000444508 KRT79Q5XKE5 535 aa19.48■□□□□ 0.71
SMARCAL1-209ENST00000444508 SNX29Q8TEQ0 813 aa19.48■□□□□ 0.71
SMARCAL1-209ENST00000444508 OSBPL7Q9BZF2 842 aa19.48■□□□□ 0.71
SMARCAL1-209ENST00000444508 ARID2Q68CP9 1835 aa19.48■□□□□ 0.71
SMARCAL1-209ENST00000444508 VWA3AA6NCI4 1184 aa19.47■□□□□ 0.71
SMARCAL1-209ENST00000444508 GAS2O43903 313 aaKnown RBP19.47■□□□□ 0.71
SMARCAL1-209ENST00000444508 CD52P31358 61 aa19.47■□□□□ 0.71
SMARCAL1-209ENST00000444508 NLRP11P59045 1033 aaKnown RBP19.47■□□□□ 0.71
SMARCAL1-209ENST00000444508 EMC2Q15006 297 aa19.47■□□□□ 0.71
SMARCAL1-209ENST00000444508 IL17AQ16552 155 aa19.47■□□□□ 0.71
SMARCAL1-209ENST00000444508 ODR4Q5SWX8 454 aa19.47■□□□□ 0.71
SMARCAL1-209ENST00000444508 FAM109BQ6ICB4 259 aaPredicted RBP19.47■□□□□ 0.71
SMARCAL1-209ENST00000444508 GPR153Q6NV75 609 aa19.47■□□□□ 0.71
SMARCAL1-209ENST00000444508 POTEGQ6S5H5 508 aa19.47■□□□□ 0.71
SMARCAL1-209ENST00000444508 ZNF579Q8NAF0 562 aaKnown RBP19.47■□□□□ 0.71
SMARCAL1-209ENST00000444508 PHOSPHO2Q8TCD6 241 aa19.47■□□□□ 0.71
SMARCAL1-209ENST00000444508 PIGOQ8TEQ8 1089 aa19.47■□□□□ 0.71
SMARCAL1-209ENST00000444508 OSMRQ99650 979 aa19.47■□□□□ 0.71
SMARCAL1-209ENST00000444508 DHX33Q9H6R0 707 aaKnown RBP19.47■□□□□ 0.71
SMARCAL1-209ENST00000444508 SUCLA2Q9P2R7 463 aaPredicted RBP19.47■□□□□ 0.71
SMARCAL1-209ENST00000444508 LOXHD1Q8IVV2 1947 aa19.47■□□□□ 0.71
SMARCAL1-209ENST00000444508 GRXCR1A8MXD5 290 aa19.46■□□□□ 0.71
SMARCAL1-209ENST00000444508 GPR32O75388 356 aa19.46■□□□□ 0.71
SMARCAL1-209ENST00000444508 RPS6KA5O75582 802 aa19.46■□□□□ 0.71
SMARCAL1-209ENST00000444508 AMHP03971 560 aa19.46■□□□□ 0.71
SMARCAL1-209ENST00000444508 MKRN4PQ13434 485 aaPredicted RBP19.46■□□□□ 0.71
SMARCAL1-209ENST00000444508 DRP2Q13474 957 aa19.46■□□□□ 0.71
SMARCAL1-209ENST00000444508 RAB30Q15771 203 aa19.46■□□□□ 0.71
SMARCAL1-209ENST00000444508 TCP11Q8WWU5 503 aa19.46■□□□□ 0.71
SMARCAL1-209ENST00000444508 NLRP7Q8WX94 980 aa19.46■□□□□ 0.71
SMARCAL1-209ENST00000444508 AGO3Q9H9G7 860 aaKnown RBP19.46■□□□□ 0.71
SMARCAL1-209ENST00000444508 CDHR5Q9HBB8 845 aa19.46■□□□□ 0.71
SMARCAL1-209ENST00000444508 BMP2KQ9NSY1 1161 aaPredicted RBP19.46■□□□□ 0.71
SMARCAL1-209ENST00000444508 MSRAQ9UJ68 235 aa19.46■□□□□ 0.71
SMARCAL1-209ENST00000444508 MICAL3Q7RTP6 2002 aa19.46■□□□□ 0.71
SMARCAL1-209ENST00000444508 PP2D1A8MPX8 630 aa19.45■□□□□ 0.7
SMARCAL1-209ENST00000444508 DGAT1O75907 488 aa19.45■□□□□ 0.7
SMARCAL1-209ENST00000444508 ZSCAN22P10073 491 aaPredicted RBP19.45■□□□□ 0.7
SMARCAL1-209ENST00000444508 RARRES1P49788 294 aa19.45■□□□□ 0.7
SMARCAL1-209ENST00000444508 GPC3P51654 580 aa19.45■□□□□ 0.7
SMARCAL1-209ENST00000444508 FAM173BQ6P4H8 233 aa19.45■□□□□ 0.7
SMARCAL1-209ENST00000444508 RHPN2Q8IUC4 686 aa19.45■□□□□ 0.7
SMARCAL1-209ENST00000444508 PSPC1Q8WXF1 523 aaKnown RBP19.45■□□□□ 0.7
SMARCAL1-209ENST00000444508 MTRQ99707 1265 aa19.45■□□□□ 0.7
SMARCAL1-209ENST00000444508 ADAMTS10Q9H324 1103 aa19.45■□□□□ 0.7
SMARCAL1-209ENST00000444508 ATP6V0A4Q9HBG4 840 aa19.45■□□□□ 0.7
SMARCAL1-209ENST00000444508 DBR1Q9UK59 544 aaKnown RBP19.45■□□□□ 0.7
SMARCAL1-209ENST00000444508 PADI3Q9ULW8 664 aa19.45■□□□□ 0.7
SMARCAL1-209ENST00000444508 KIAA1024Q9UPX6 916 aa19.45■□□□□ 0.7
SMARCAL1-209ENST00000444508 NOC2LQ9Y3T9 749 aaKnown RBP19.45■□□□□ 0.7
SMARCAL1-209ENST00000444508 CLIC4Q9Y696 253 aa19.45■□□□□ 0.7
SMARCAL1-209ENST00000444508 A0A087WWV3 80 aa19.44■□□□□ 0.7
SMARCAL1-209ENST00000444508 RBAK-RBAKDNI3L0D1 243 aa19.44■□□□□ 0.7
SMARCAL1-209ENST00000444508 GPR182O15218 404 aa19.44■□□□□ 0.7
SMARCAL1-209ENST00000444508 DNAJB2P25686 324 aa19.44■□□□□ 0.7
SMARCAL1-209ENST00000444508 DEFB103AP81534 67 aa19.44■□□□□ 0.7
SMARCAL1-209ENST00000444508 CEBPZQ03701 1054 aaKnown RBP19.44■□□□□ 0.7
SMARCAL1-209ENST00000444508 NFX1Q12986 1120 aaKnown RBP19.44■□□□□ 0.7
SMARCAL1-209ENST00000444508 FOXD4L5Q5VV16 416 aaPredicted RBP19.44■□□□□ 0.7
SMARCAL1-209ENST00000444508 FAM43BQ6ZT52 329 aaPredicted RBP19.44■□□□□ 0.7
SMARCAL1-209ENST00000444508 HERC6Q8IVU3 1022 aa19.44■□□□□ 0.7
SMARCAL1-209ENST00000444508 TMEM40Q8WWA1 233 aa19.44■□□□□ 0.7
SMARCAL1-209ENST00000444508 FOXD4L4Q8WXT5 416 aaPredicted RBP19.44■□□□□ 0.7
SMARCAL1-209ENST00000444508 TMEM143Q96AN5 459 aa19.44■□□□□ 0.7
SMARCAL1-209ENST00000444508 ZNF668Q96K58 619 aaPredicted RBP19.44■□□□□ 0.7
SMARCAL1-209ENST00000444508 AK8Q96MA6 479 aa19.44■□□□□ 0.7
SMARCAL1-209ENST00000444508 ZBED2Q9BTP6 218 aa19.44■□□□□ 0.7
SMARCAL1-209ENST00000444508 FTHL17Q9BXU8 183 aa19.44■□□□□ 0.7
SMARCAL1-209ENST00000444508 PBX4Q9BYU1 374 aa19.44■□□□□ 0.7
SMARCAL1-209ENST00000444508 DDX19AQ9NUU7 478 aaKnown RBP19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms