RNA–Protein interactions for RNA: ENST00000443046.5

HMGN1-208, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 823 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-208ENST00000443046 MEIS1O00470 390 aa16.43■□□□□ 0.22
HMGN1-208ENST00000443046 CCNE2O96020 404 aa16.43■□□□□ 0.22
HMGN1-208ENST00000443046 IBSPP21815 317 aaPredicted RBP16.43■□□□□ 0.22
HMGN1-208ENST00000443046 CRYBB1P53674 252 aaPredicted RBP16.43■□□□□ 0.22
HMGN1-208ENST00000443046 MTMR3Q13615 1198 aa16.43■□□□□ 0.22
HMGN1-208ENST00000443046 CEP55Q53EZ4 464 aa16.43■□□□□ 0.22
HMGN1-208ENST00000443046 TTC22Q5TAA0 569 aa16.43■□□□□ 0.22
HMGN1-208ENST00000443046 LLGL2Q6P1M3 1020 aa16.43■□□□□ 0.22
HMGN1-208ENST00000443046 KCNT2Q6UVM3 1135 aa16.43■□□□□ 0.22
HMGN1-208ENST00000443046 ZBTB33Q86T24 672 aa16.43■□□□□ 0.22
HMGN1-208ENST00000443046 TMTC2Q8N394 836 aa16.43■□□□□ 0.22
HMGN1-208ENST00000443046 RUFY2Q8WXA3 655 aa16.43■□□□□ 0.22
HMGN1-208ENST00000443046 CASP10Q92851 521 aa16.43■□□□□ 0.22
HMGN1-208ENST00000443046 NECTIN4Q96NY8 510 aa16.43■□□□□ 0.22
HMGN1-208ENST00000443046 POMKQ9H5K3 350 aa16.43■□□□□ 0.22
HMGN1-208ENST00000443046 CDH22Q9UJ99 828 aa16.43■□□□□ 0.22
HMGN1-208ENST00000443046 GINS2Q9Y248 185 aa16.43■□□□□ 0.22
HMGN1-208ENST00000443046 hCG_1642624A0A1W2PR95 340 aa16.42■□□□□ 0.22
HMGN1-208ENST00000443046 SH2B2O14492 632 aaPredicted RBP16.42■□□□□ 0.22
HMGN1-208ENST00000443046 SGSM2O43147 1006 aa16.42■□□□□ 0.22
HMGN1-208ENST00000443046 GPR32O75388 356 aa16.42■□□□□ 0.22
HMGN1-208ENST00000443046 ATP4AP20648 1035 aa16.42■□□□□ 0.22
HMGN1-208ENST00000443046 SP100P23497 879 aaPredicted RBP16.42■□□□□ 0.22
HMGN1-208ENST00000443046 LIFRP42702 1097 aa16.42■□□□□ 0.22
HMGN1-208ENST00000443046 ITIH3Q06033 890 aa16.42■□□□□ 0.22
HMGN1-208ENST00000443046 COL9A3Q14050 684 aaPredicted RBP16.42■□□□□ 0.22
HMGN1-208ENST00000443046 ZNF484Q5JVG2 852 aa16.42■□□□□ 0.22
HMGN1-208ENST00000443046 MRPL43Q8N983 215 aaKnown RBP16.42■□□□□ 0.22
HMGN1-208ENST00000443046 ENTPD7Q9NQZ7 604 aa16.42■□□□□ 0.22
HMGN1-208ENST00000443046 C2orf71A6NGG8 1288 aa16.41■□□□□ 0.22
HMGN1-208ENST00000443046 DHX15O43143 795 aaKnown RBP16.41■□□□□ 0.22
HMGN1-208ENST00000443046 PRC1O43663 620 aa16.41■□□□□ 0.22
HMGN1-208ENST00000443046 C22orf31O95567 290 aa16.41■□□□□ 0.22
HMGN1-208ENST00000443046 CALM1P0DP23 149 aa16.41■□□□□ 0.22
HMGN1-208ENST00000443046 CALM2P0DP24 149 aa16.41■□□□□ 0.22
HMGN1-208ENST00000443046 CALM3P0DP25 149 aa16.41■□□□□ 0.22
HMGN1-208ENST00000443046 RXRAP19793 462 aa16.41■□□□□ 0.22
HMGN1-208ENST00000443046 PPM1AP35813 382 aa16.41■□□□□ 0.22
HMGN1-208ENST00000443046 KIZQ2M2Z5 673 aa16.41■□□□□ 0.22
HMGN1-208ENST00000443046 TPRNQ4KMQ1 711 aa16.41■□□□□ 0.22
HMGN1-208ENST00000443046 TYW1BQ6NUM6 668 aa16.41■□□□□ 0.22
HMGN1-208ENST00000443046 TMTC3Q6ZXV5 915 aa16.41■□□□□ 0.22
HMGN1-208ENST00000443046 CCDC60Q8IWA6 550 aaPredicted RBP16.41■□□□□ 0.22
HMGN1-208ENST00000443046 OSMRQ99650 979 aa16.41■□□□□ 0.22
HMGN1-208ENST00000443046 HCFC2Q9Y5Z7 792 aa16.41■□□□□ 0.22
HMGN1-208ENST00000443046 HOXA2O43364 376 aa16.4■□□□□ 0.22
HMGN1-208ENST00000443046 PBX3P40426 434 aa16.4■□□□□ 0.22
HMGN1-208ENST00000443046 KRT17Q04695 432 aa16.4■□□□□ 0.22
HMGN1-208ENST00000443046 ASTLQ6HA08 431 aaPredicted RBP16.4■□□□□ 0.22
HMGN1-208ENST00000443046 CES5AQ6NT32 575 aa16.4■□□□□ 0.22
HMGN1-208ENST00000443046 CASC1Q6TDU7 716 aa16.4■□□□□ 0.22
HMGN1-208ENST00000443046 NIPA1Q7RTP0 329 aa16.4■□□□□ 0.22
HMGN1-208ENST00000443046 TMC7Q7Z402 723 aa16.4■□□□□ 0.22
HMGN1-208ENST00000443046 ZDHHC14Q8IZN3 488 aa16.4■□□□□ 0.22
HMGN1-208ENST00000443046 FANCBQ8NB91 859 aa16.4■□□□□ 0.22
HMGN1-208ENST00000443046 TMEM87BQ96K49 555 aa16.4■□□□□ 0.22
HMGN1-208ENST00000443046 ZNF558Q96NG5 402 aa16.4■□□□□ 0.22
HMGN1-208ENST00000443046 SMOC2Q9H3U7 446 aa16.4■□□□□ 0.22
HMGN1-208ENST00000443046 RIC8AQ9NPQ8 531 aa16.4■□□□□ 0.22
HMGN1-208ENST00000443046 TSHZ2Q9NRE2 1034 aa16.4■□□□□ 0.22
HMGN1-208ENST00000443046 SPG21Q9NZD8 308 aa16.4■□□□□ 0.22
HMGN1-208ENST00000443046 MYH9P35579 1960 aaKnown RBP16.4■□□□□ 0.22
HMGN1-208ENST00000443046 CCDC69A6NI79 296 aa16.39■□□□□ 0.21
HMGN1-208ENST00000443046 CLASP2O75122 1294 aaKnown RBP16.39■□□□□ 0.21
HMGN1-208ENST00000443046 FOSP01100 380 aaPredicted RBP16.39■□□□□ 0.21
HMGN1-208ENST00000443046 MCM5P33992 734 aa16.39■□□□□ 0.21
HMGN1-208ENST00000443046 SREBF1P36956 1147 aa16.39■□□□□ 0.21
HMGN1-208ENST00000443046 MTHFRP42898 656 aa16.39■□□□□ 0.21
HMGN1-208ENST00000443046 CLCN5P51795 746 aa16.39■□□□□ 0.21
HMGN1-208ENST00000443046 SMC1AQ14683 1233 aaKnown RBP16.39■□□□□ 0.21
HMGN1-208ENST00000443046 FAM160B1Q5W0V3 765 aa16.39■□□□□ 0.21
HMGN1-208ENST00000443046 WWC2Q6AWC2 1192 aa16.39■□□□□ 0.21
HMGN1-208ENST00000443046 HEATR3Q7Z4Q2 680 aa16.39■□□□□ 0.21
HMGN1-208ENST00000443046 SLC39A11Q8N1S5 342 aa16.39■□□□□ 0.21
HMGN1-208ENST00000443046 LRRC43Q8N309 656 aa16.39■□□□□ 0.21
HMGN1-208ENST00000443046 CCDC82Q8N4S0 544 aa16.39■□□□□ 0.21
HMGN1-208ENST00000443046 ZNF302Q9NR11 478 aa16.39■□□□□ 0.21
HMGN1-208ENST00000443046 MAFBQ9Y5Q3 323 aaPredicted RBP16.39■□□□□ 0.21
HMGN1-208ENST00000443046 RBM8AQ9Y5S9 174 aaKnown RBP16.39■□□□□ 0.21
HMGN1-208ENST00000443046 BACH1O14867 736 aa16.38■□□□□ 0.21
HMGN1-208ENST00000443046 VTNP04004 478 aa16.38■□□□□ 0.21
HMGN1-208ENST00000443046 CLK2P49760 499 aaKnown RBP16.38■□□□□ 0.21
HMGN1-208ENST00000443046 CLLU1OSQ5K130 101 aa16.38■□□□□ 0.21
HMGN1-208ENST00000443046 SWSAP1Q6NVH7 229 aa16.38■□□□□ 0.21
HMGN1-208ENST00000443046 PDXDC2PQ6P474 469 aa16.38■□□□□ 0.21
HMGN1-208ENST00000443046 NFXL1Q6ZNB6 911 aa16.38■□□□□ 0.21
HMGN1-208ENST00000443046 ERMP1Q7Z2K6 904 aa16.38■□□□□ 0.21
HMGN1-208ENST00000443046 ECHDC2Q86YB7 292 aa16.38■□□□□ 0.21
HMGN1-208ENST00000443046 LINC01465Q8N7H1 131 aa16.38■□□□□ 0.21
HMGN1-208ENST00000443046 CRYGNQ8WXF5 182 aa16.38■□□□□ 0.21
HMGN1-208ENST00000443046 BBXQ8WY36 941 aaPredicted RBP16.38■□□□□ 0.21
HMGN1-208ENST00000443046 PGBD1Q96JS3 809 aa16.38■□□□□ 0.21
HMGN1-208ENST00000443046 PPP1R16BQ96T49 567 aa16.38■□□□□ 0.21
HMGN1-208ENST00000443046 ANO3Q9BYT9 981 aa16.38■□□□□ 0.21
HMGN1-208ENST00000443046 ADAMTS10Q9H324 1103 aa16.38■□□□□ 0.21
HMGN1-208ENST00000443046 USTQ9Y2C2 406 aa16.38■□□□□ 0.21
HMGN1-208ENST00000443046 EP300Q09472 2414 aaPredicted RBP16.38■□□□□ 0.21
HMGN1-208ENST00000443046 DENND4AQ7Z401 1863 aa16.37■□□□□ 0.21
HMGN1-208ENST00000443046 WDR81Q562E7 1941 aa16.37■□□□□ 0.21
HMGN1-208ENST00000443046 IGLV3-22A0A075B6J6 115 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms