RNA–Protein interactions for RNA: ENST00000442975.6

CDKN3-204, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best) BASIC

Gene CDKN3, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-204ENST00000442975 GRB10Q13322 594 aa23.64■■□□□ 1.37
CDKN3-204ENST00000442975 SP7Q8TDD2 431 aaPredicted RBP23.64■■□□□ 1.37
CDKN3-204ENST00000442975 ZNF668Q96K58 619 aaPredicted RBP23.64■■□□□ 1.37
CDKN3-204ENST00000442975 C17orf80Q9BSJ5 609 aa23.64■■□□□ 1.37
CDKN3-204ENST00000442975 MICAL3Q7RTP6 2002 aa23.64■■□□□ 1.37
CDKN3-204ENST00000442975 NLRP11P59045 1033 aaKnown RBP23.63■■□□□ 1.37
CDKN3-204ENST00000442975 ERVK-21P61565 698 aa23.63■■□□□ 1.37
CDKN3-204ENST00000442975 CYP4A11Q02928 519 aa23.63■■□□□ 1.37
CDKN3-204ENST00000442975 LINC01465Q8N7H1 131 aa23.63■■□□□ 1.37
CDKN3-204ENST00000442975 LXNQ9BS40 222 aa23.63■■□□□ 1.37
CDKN3-204ENST00000442975 TMX1Q9H3N1 280 aa23.63■■□□□ 1.37
CDKN3-204ENST00000442975 ERVK-5Q9HDB9 667 aa23.63■■□□□ 1.37
CDKN3-204ENST00000442975 A0A0C4DFX4 3053 aa23.62■■□□□ 1.37
CDKN3-204ENST00000442975 DENND3A2RUS2 1198 aa23.62■■□□□ 1.37
CDKN3-204ENST00000442975 DKC1O60832 514 aaKnown RBP eCLIP23.62■■□□□ 1.37
CDKN3-204ENST00000442975 GPR32O75388 356 aa23.62■■□□□ 1.37
CDKN3-204ENST00000442975 TARBP2Q15633 366 aaKnown RBP23.62■■□□□ 1.37
CDKN3-204ENST00000442975 FAM228AQ86W67 206 aa23.62■■□□□ 1.37
CDKN3-204ENST00000442975 FBXO22Q8NEZ5 403 aa23.62■■□□□ 1.37
CDKN3-204ENST00000442975 NLRP7Q8WX94 980 aa23.62■■□□□ 1.37
CDKN3-204ENST00000442975 NIFKQ9BYG3 293 aaKnown RBP23.62■■□□□ 1.37
CDKN3-204ENST00000442975 TSPYL2Q9H2G4 693 aaPredicted RBP23.62■■□□□ 1.37
CDKN3-204ENST00000442975 ST3GAL5Q9UNP4 418 aa23.62■■□□□ 1.37
CDKN3-204ENST00000442975 MTCH2Q9Y6C9 303 aa23.62■■□□□ 1.37
CDKN3-204ENST00000442975 ADGRA3Q8IWK6 1321 aa23.61■■□□□ 1.37
CDKN3-204ENST00000442975 GPR182O15218 404 aa23.61■■□□□ 1.37
CDKN3-204ENST00000442975 STBD1O95210 358 aa23.61■■□□□ 1.37
CDKN3-204ENST00000442975 P4HBP07237 508 aaKnown RBP23.61■■□□□ 1.37
CDKN3-204ENST00000442975 MCM7P33993 719 aa23.61■■□□□ 1.37
CDKN3-204ENST00000442975 DRP2Q13474 957 aa23.61■■□□□ 1.37
CDKN3-204ENST00000442975 EPHA7Q15375 998 aa23.61■■□□□ 1.37
CDKN3-204ENST00000442975 SKIV2LQ15477 1246 aaKnown RBP23.61■■□□□ 1.37
CDKN3-204ENST00000442975 ODR4Q5SWX8 454 aa23.61■■□□□ 1.37
CDKN3-204ENST00000442975 ANO5Q75V66 913 aa23.61■■□□□ 1.37
CDKN3-204ENST00000442975 FBXO18Q8NFZ0 1043 aa23.61■■□□□ 1.37
CDKN3-204ENST00000442975 DYDC2Q96IM9 177 aa23.61■■□□□ 1.37
CDKN3-204ENST00000442975 TBC1D32Q96NH3 1257 aa23.61■■□□□ 1.37
CDKN3-204ENST00000442975 PRDM6Q9NQX0 595 aa23.61■■□□□ 1.37
CDKN3-204ENST00000442975 RGL1Q9NZL6 768 aa23.61■■□□□ 1.37
CDKN3-204ENST00000442975 WRAP73Q9P2S5 460 aaPredicted RBP23.61■■□□□ 1.37
CDKN3-204ENST00000442975 MGEA5O60502 916 aa23.6■■□□□ 1.37
CDKN3-204ENST00000442975 TXKP42681 527 aa23.6■■□□□ 1.37
CDKN3-204ENST00000442975 GPC3P51654 580 aa23.6■■□□□ 1.37
CDKN3-204ENST00000442975 SPIRE1Q08AE8 756 aa23.6■■□□□ 1.37
CDKN3-204ENST00000442975 CTTNQ14247 550 aaKnown RBP23.6■■□□□ 1.37
CDKN3-204ENST00000442975 RTN4RL1Q86UN2 441 aaPredicted RBP23.6■■□□□ 1.37
CDKN3-204ENST00000442975 NPAS4Q8IUM7 802 aa23.6■■□□□ 1.37
CDKN3-204ENST00000442975 FIBCD1Q8N539 461 aa23.6■■□□□ 1.37
CDKN3-204ENST00000442975 FOXP1Q9H334 677 aaPredicted RBP23.6■■□□□ 1.37
CDKN3-204ENST00000442975 BMP2KQ9NSY1 1161 aaPredicted RBP23.6■■□□□ 1.37
CDKN3-204ENST00000442975 LRFN2Q9ULH4 789 aa23.6■■□□□ 1.37
CDKN3-204ENST00000442975 LPXNO60711 386 aa23.59■■□□□ 1.37
CDKN3-204ENST00000442975 CD2BP2O95400 341 aaKnown RBP23.59■■□□□ 1.37
CDKN3-204ENST00000442975 DNM2P50570 870 aa23.59■■□□□ 1.37
CDKN3-204ENST00000442975 NPEPPSP55786 919 aa23.59■■□□□ 1.37
CDKN3-204ENST00000442975 BTG3Q14201 252 aaPredicted RBP23.59■■□□□ 1.37
CDKN3-204ENST00000442975 TMX3Q96JJ7 454 aa23.59■■□□□ 1.37
CDKN3-204ENST00000442975 CEP170P1Q96L14 293 aa23.59■■□□□ 1.37
CDKN3-204ENST00000442975 ADAM2Q99965 735 aa23.59■■□□□ 1.37
CDKN3-204ENST00000442975 ADAMTS10Q9H324 1103 aa23.59■■□□□ 1.37
CDKN3-204ENST00000442975 TTC12Q9H892 705 aaPredicted RBP23.59■■□□□ 1.37
CDKN3-204ENST00000442975 CYP26B1Q9NR63 512 aa23.59■■□□□ 1.37
CDKN3-204ENST00000442975 PCDHA12Q9UN75 941 aa23.59■■□□□ 1.37
CDKN3-204ENST00000442975 STAG3L1P0CL83 205 aa23.58■■□□□ 1.37
CDKN3-204ENST00000442975 YWHABP31946 246 aaKnown RBP23.58■■□□□ 1.37
CDKN3-204ENST00000442975 CTNNB1P35222 781 aa23.58■■□□□ 1.37
CDKN3-204ENST00000442975 POLGP54098 1239 aaPredicted RBP23.58■■□□□ 1.37
CDKN3-204ENST00000442975 PAN2Q504Q3 1202 aaKnown RBP23.58■■□□□ 1.37
CDKN3-204ENST00000442975 EPC2Q52LR7 807 aa23.58■■□□□ 1.37
CDKN3-204ENST00000442975 SLC7A3Q8WY07 619 aa23.58■■□□□ 1.37
CDKN3-204ENST00000442975 SAMD11Q96NU1 681 aa23.58■■□□□ 1.37
CDKN3-204ENST00000442975 TMEM60Q9H2L4 133 aa23.58■■□□□ 1.37
CDKN3-204ENST00000442975 ZSWIM4Q9H7M6 989 aa23.58■■□□□ 1.37
CDKN3-204ENST00000442975 COL4A4P53420 1690 aaPredicted RBP23.57■■□□□ 1.36
CDKN3-204ENST00000442975 COL4A6Q14031 1691 aa23.57■■□□□ 1.36
CDKN3-204ENST00000442975 NOSTRINQ8IVI9 506 aa23.57■■□□□ 1.36
CDKN3-204ENST00000442975 TPH2Q8IWU9 490 aa23.57■■□□□ 1.36
CDKN3-204ENST00000442975 ZNF710Q8N1W2 664 aa23.57■■□□□ 1.36
CDKN3-204ENST00000442975 CEP89Q96ST8 783 aa23.57■■□□□ 1.36
CDKN3-204ENST00000442975 EIF2AK1Q9BQI3 630 aaKnown RBP23.57■■□□□ 1.36
CDKN3-204ENST00000442975 JPH2Q9BR39 696 aaPredicted RBP23.57■■□□□ 1.36
CDKN3-204ENST00000442975 RC3H2Q9HBD1 1191 aaKnown RBP23.57■■□□□ 1.36
CDKN3-204ENST00000442975 SUCLA2Q9P2R7 463 aaPredicted RBP23.57■■□□□ 1.36
CDKN3-204ENST00000442975 THEGQ9P2T0 379 aa23.57■■□□□ 1.36
CDKN3-204ENST00000442975 KIF3AQ9Y496 699 aa23.57■■□□□ 1.36
CDKN3-204ENST00000442975 TRANK1O15050 2925 aa23.56■■□□□ 1.36
CDKN3-204ENST00000442975 POTEMA6NI47 508 aa23.56■■□□□ 1.36
CDKN3-204ENST00000442975 MAFO75444 373 aaPredicted RBP23.56■■□□□ 1.36
CDKN3-204ENST00000442975 DGKIO75912 1065 aa23.56■■□□□ 1.36
CDKN3-204ENST00000442975 DARSP14868 501 aaKnown RBP23.56■■□□□ 1.36
CDKN3-204ENST00000442975 EIF4BP23588 611 aaKnown RBP23.56■■□□□ 1.36
CDKN3-204ENST00000442975 SARSP49591 514 aaKnown RBP23.56■■□□□ 1.36
CDKN3-204ENST00000442975 ZNF174Q15697 407 aa23.56■■□□□ 1.36
CDKN3-204ENST00000442975 TTC38Q5R3I4 469 aa23.56■■□□□ 1.36
CDKN3-204ENST00000442975 RHPN2Q8IUC4 686 aa23.56■■□□□ 1.36
CDKN3-204ENST00000442975 C4orf19Q8IY42 314 aa23.56■■□□□ 1.36
CDKN3-204ENST00000442975 TMEM192Q8IY95 271 aa23.56■■□□□ 1.36
CDKN3-204ENST00000442975 ZNF579Q8NAF0 562 aaKnown RBP23.56■■□□□ 1.36
CDKN3-204ENST00000442975 NLRP4Q96MN2 994 aa23.56■■□□□ 1.36
CDKN3-204ENST00000442975 CCDC43Q96MW1 224 aaKnown RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms