RNA–Protein interactions for RNA: ENST00000442234.5

LIG4-203, Transcript of DNA ligase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIG4, Length 3,982 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-203ENST00000442234 SLC35F6Q8N357 371 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 RUNDC1Q96C34 613 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 DHTKD1Q96HY7 919 aaPredicted RBP3.01□□□□□ -1.93
LIG4-203ENST00000442234 CDC5LQ99459 802 aaKnown RBP3.01□□□□□ -1.93
LIG4-203ENST00000442234 EYA3Q99504 573 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 SLX1AQ9BQ83 275 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 PLVAPQ9BX97 442 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 OXCT2Q9BYC2 517 aaPredicted RBP3.01□□□□□ -1.93
LIG4-203ENST00000442234 NSRP1Q9H0G5 558 aaKnown RBP3.01□□□□□ -1.93
LIG4-203ENST00000442234 JADE2Q9NQC1 790 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 ZBTB40Q9NUA8 1239 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 GPRC5DQ9NZD1 345 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 CTTNBP2NLQ9P2B4 639 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 LNPEPQ9UIQ6 1025 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 IVNS1ABPQ9Y6Y0 642 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 CPSF1Q10570 1443 aaKnown RBP3.01□□□□□ -1.93
LIG4-203ENST00000442234 TUBGCP6Q96RT7 1819 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 PEAK1Q9H792 1746 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 HTR3EA5X5Y0 456 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 GMNCA6NCL1 334 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 GOLGA8CPA6NN73 597 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 ABLIM1O14639 778 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 ADCY3O60266 1144 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 MGRN1O60291 552 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 TSPAN9O75954 239 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 FARP2O94887 1054 aaPredicted RBP3.01□□□□□ -1.93
LIG4-203ENST00000442234 LDHCP07864 332 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 ENDOUP21128 410 aaKnown RBP3.01□□□□□ -1.93
LIG4-203ENST00000442234 COPB2P35606 906 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 GYG1P46976 350 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 BASP1P80723 227 aaKnown RBP3.01□□□□□ -1.93
LIG4-203ENST00000442234 KCNA1Q09470 495 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 EIF2B5Q13144 721 aaKnown RBP3.01□□□□□ -1.93
LIG4-203ENST00000442234 PAK2Q13177 524 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 XRCC4Q13426 336 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 ME3Q16798 604 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 PTPN21Q16825 1174 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 CCDC153Q494R4 210 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 MSS51Q4VC12 460 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 ZMYM1Q5SVZ6 1142 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 RUFY4Q6ZNE9 571 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 DAAM2Q86T65 1068 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 PLEKHM2Q8IWE5 1019 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 GPC2Q8N158 579 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 ANKRD13CQ8N6S4 541 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 NOA1Q8NC60 698 aaKnown RBP3.01□□□□□ -1.93
LIG4-203ENST00000442234 DEPTORQ8TB45 409 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 GFM2Q969S9 779 aaKnown RBP3.01□□□□□ -1.93
LIG4-203ENST00000442234 DYDC2Q96IM9 177 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 RNPC3Q96LT9 517 aaKnown RBP3.01□□□□□ -1.93
LIG4-203ENST00000442234 TMEM39BQ9GZU3 492 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 IRF2BPLQ9H1B7 796 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 IL21Q9HBE4 155 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 DSEQ9UL01 958 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 MTMR6Q9Y217 621 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 HCN4Q9Y3Q4 1203 aa3.01□□□□□ -1.93
LIG4-203ENST00000442234 USP54Q70EL1 1684 aa3□□□□□ -1.93
LIG4-203ENST00000442234 A6NHS1 94 aa3□□□□□ -1.93
LIG4-203ENST00000442234 SPTLC1O15269 473 aa3□□□□□ -1.93
LIG4-203ENST00000442234 STX10O60499 249 aa3□□□□□ -1.93
LIG4-203ENST00000442234 OPHN1O60890 802 aa3□□□□□ -1.93
LIG4-203ENST00000442234 PENKP01210 267 aaPredicted RBP3□□□□□ -1.93
LIG4-203ENST00000442234 SLC3A2P08195 630 aaKnown RBP3□□□□□ -1.93
LIG4-203ENST00000442234 FECHP22830 423 aa3□□□□□ -1.93
LIG4-203ENST00000442234 PHBP35232 272 aa3□□□□□ -1.93
LIG4-203ENST00000442234 MDH1P40925 334 aaKnown RBP3□□□□□ -1.93
LIG4-203ENST00000442234 ZNF131P52739 623 aa3□□□□□ -1.93
LIG4-203ENST00000442234 HIRAP54198 1017 aaPredicted RBP3□□□□□ -1.93
LIG4-203ENST00000442234 ADKP55263 362 aaKnown RBP3□□□□□ -1.93
LIG4-203ENST00000442234 MCL1Q07820 350 aa3□□□□□ -1.93
LIG4-203ENST00000442234 PDE4DQ08499 809 aa3□□□□□ -1.93
LIG4-203ENST00000442234 ADAM9Q13443 819 aa3□□□□□ -1.93
LIG4-203ENST00000442234 CYLC2Q14093 348 aaPredicted RBP3□□□□□ -1.93
LIG4-203ENST00000442234 LRP8Q14114 963 aa3□□□□□ -1.93
LIG4-203ENST00000442234 PARP10Q53GL7 1025 aa3□□□□□ -1.93
LIG4-203ENST00000442234 LDHAL6AQ6ZMR3 332 aa3□□□□□ -1.93
LIG4-203ENST00000442234 MIER3Q7Z3K6 550 aa3□□□□□ -1.93
LIG4-203ENST00000442234 PALB2Q86YC2 1186 aa3□□□□□ -1.93
LIG4-203ENST00000442234 SCUBE1Q8IWY4 988 aa3□□□□□ -1.93
LIG4-203ENST00000442234 IL17REQ8NFR9 667 aa3□□□□□ -1.93
LIG4-203ENST00000442234 DNAJC9Q8WXX5 260 aa3□□□□□ -1.93
LIG4-203ENST00000442234 IFT81Q8WYA0 676 aa3□□□□□ -1.93
LIG4-203ENST00000442234 NACC2Q96BF6 587 aa3□□□□□ -1.93
LIG4-203ENST00000442234 SEC16BQ96JE7 1060 aa3□□□□□ -1.93
LIG4-203ENST00000442234 ZSCAN31Q96LW9 406 aaPredicted RBP3□□□□□ -1.93
LIG4-203ENST00000442234 DDX23Q9BUQ8 820 aaKnown RBP3□□□□□ -1.93
LIG4-203ENST00000442234 NYXQ9GZU5 481 aa3□□□□□ -1.93
LIG4-203ENST00000442234 DEFB129Q9H1M3 183 aa3□□□□□ -1.93
LIG4-203ENST00000442234 TRPV5Q9NQA5 729 aa3□□□□□ -1.93
LIG4-203ENST00000442234 HOMER2Q9NSB8 354 aa3□□□□□ -1.93
LIG4-203ENST00000442234 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3□□□□□ -1.93
LIG4-203ENST00000442234 SLC5A4Q9NY91 659 aa3□□□□□ -1.93
LIG4-203ENST00000442234 SEPT10Q9P0V9 454 aa3□□□□□ -1.93
LIG4-203ENST00000442234 BTBD7Q9P203 1132 aa3□□□□□ -1.93
LIG4-203ENST00000442234 CIDEBQ9UHD4 219 aa3□□□□□ -1.93
LIG4-203ENST00000442234 SAP30BPQ9UHR5 308 aaKnown RBP3□□□□□ -1.93
LIG4-203ENST00000442234 MOSPD1Q9UJG1 213 aa3□□□□□ -1.93
LIG4-203ENST00000442234 GUCA1BQ9UMX6 200 aa3□□□□□ -1.93
LIG4-203ENST00000442234 FLT4P35916 1363 aa3□□□□□ -1.93
LIG4-203ENST00000442234 RPAP1Q9BWH6 1393 aaPredicted RBP3□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms