RNA–Protein interactions for RNA: ENST00000441998.5

NELFE-205, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 5

Gene NELFE, Length 1,075 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-205ENST00000441998 NFX1Q12986 1120 aaKnown RBP12.54□□□□□ -0.4
NELFE-205ENST00000441998 GPM6BQ13491 265 aa12.54□□□□□ -0.4
NELFE-205ENST00000441998 BTG3Q14201 252 aaPredicted RBP12.54□□□□□ -0.4
NELFE-205ENST00000441998 COL19A1Q14993 1142 aa12.54□□□□□ -0.4
NELFE-205ENST00000441998 SKIV2LQ15477 1246 aaKnown RBP12.54□□□□□ -0.4
NELFE-205ENST00000441998 LETM2Q2VYF4 491 aa12.54□□□□□ -0.4
NELFE-205ENST00000441998 SPRED2Q7Z698 418 aa12.54□□□□□ -0.4
NELFE-205ENST00000441998 GDPD5Q8WTR4 605 aa12.54□□□□□ -0.4
NELFE-205ENST00000441998 LINC01599Q8WXQ3 324 aa12.54□□□□□ -0.4
NELFE-205ENST00000441998 ADAMTS10Q9H324 1103 aa12.54□□□□□ -0.4
NELFE-205ENST00000441998 TMX1Q9H3N1 280 aa12.54□□□□□ -0.4
NELFE-205ENST00000441998 PRDM6Q9NQX0 595 aa12.54□□□□□ -0.4
NELFE-205ENST00000441998 CHST12Q9NRB3 414 aa12.54□□□□□ -0.4
NELFE-205ENST00000441998 MTUS1Q9ULD2 1270 aa12.54□□□□□ -0.4
NELFE-205ENST00000441998 LIMCH1Q9UPQ0 1083 aa12.54□□□□□ -0.4
NELFE-205ENST00000441998 NOC2LQ9Y3T9 749 aaKnown RBP12.54□□□□□ -0.4
NELFE-205ENST00000441998 PCDHB7Q9Y5E2 793 aa12.54□□□□□ -0.4
NELFE-205ENST00000441998 PRRC2BQ5JSZ5 2229 aaKnown RBP12.54□□□□□ -0.4
NELFE-205ENST00000441998 DENND3A2RUS2 1198 aa12.53□□□□□ -0.4
NELFE-205ENST00000441998 C9IYK1 514 aa12.53□□□□□ -0.4
NELFE-205ENST00000441998 HOXA2O43364 376 aa12.53□□□□□ -0.4
NELFE-205ENST00000441998 MAFO75444 373 aaPredicted RBP12.53□□□□□ -0.4
NELFE-205ENST00000441998 STBD1O95210 358 aa12.53□□□□□ -0.4
NELFE-205ENST00000441998 BAG4O95429 457 aaKnown RBP12.53□□□□□ -0.4
NELFE-205ENST00000441998 P4HBP07237 508 aaKnown RBP12.53□□□□□ -0.4
NELFE-205ENST00000441998 QARSP47897 775 aaKnown RBP12.53□□□□□ -0.4
NELFE-205ENST00000441998 EPHA7Q15375 998 aa12.53□□□□□ -0.4
NELFE-205ENST00000441998 CSPP1Q1MSJ5 1256 aa12.53□□□□□ -0.4
NELFE-205ENST00000441998 KIZQ2M2Z5 673 aa12.53□□□□□ -0.4
NELFE-205ENST00000441998 PUS10Q3MIT2 529 aaKnown RBP12.53□□□□□ -0.4
NELFE-205ENST00000441998 MICALL1Q8N3F8 863 aa12.53□□□□□ -0.4
NELFE-205ENST00000441998 NSUN7Q8NE18 718 aaKnown RBP12.53□□□□□ -0.4
NELFE-205ENST00000441998 TNFRSF25Q93038 417 aa12.53□□□□□ -0.4
NELFE-205ENST00000441998 ZSCAN31Q96LW9 406 aaPredicted RBP12.53□□□□□ -0.4
NELFE-205ENST00000441998 CEP89Q96ST8 783 aa12.53□□□□□ -0.4
NELFE-205ENST00000441998 TRAIPQ9BWF2 469 aa12.53□□□□□ -0.4
NELFE-205ENST00000441998 INO80BQ9C086 356 aaPredicted RBP12.53□□□□□ -0.4
NELFE-205ENST00000441998 CDHR5Q9HBB8 845 aa12.53□□□□□ -0.4
NELFE-205ENST00000441998 TMEM161AQ9NX61 479 aa12.53□□□□□ -0.4
NELFE-205ENST00000441998 LRFN2Q9ULH4 789 aa12.53□□□□□ -0.4
NELFE-205ENST00000441998 NCOR1O75376 2440 aa12.52□□□□□ -0.4
NELFE-205ENST00000441998 CARNS1A5YM72 827 aa12.52□□□□□ -0.41
NELFE-205ENST00000441998 TNFRSF10AO00220 468 aa12.52□□□□□ -0.41
NELFE-205ENST00000441998 CHMP2AO43633 222 aa12.52□□□□□ -0.41
NELFE-205ENST00000441998 SLC37A4O43826 429 aa12.52□□□□□ -0.41
NELFE-205ENST00000441998 GAS2O43903 313 aaKnown RBP12.52□□□□□ -0.41
NELFE-205ENST00000441998 CCNT1O60563 726 aaKnown RBP12.52□□□□□ -0.41
NELFE-205ENST00000441998 MMP1P03956 469 aa12.52□□□□□ -0.41
NELFE-205ENST00000441998 DARSP14868 501 aaKnown RBP12.52□□□□□ -0.41
NELFE-205ENST00000441998 ZSCAN20P17040 1043 aaPredicted RBP12.52□□□□□ -0.41
NELFE-205ENST00000441998 GPC3P51654 580 aa12.52□□□□□ -0.41
NELFE-205ENST00000441998 NLRP11P59045 1033 aaKnown RBP12.52□□□□□ -0.41
NELFE-205ENST00000441998 TRIM29Q14134 588 aa12.52□□□□□ -0.41
NELFE-205ENST00000441998 DSC3Q14574 896 aa12.52□□□□□ -0.41
NELFE-205ENST00000441998 PIK3AP1Q6ZUJ8 805 aa12.52□□□□□ -0.41
NELFE-205ENST00000441998 ZNF410Q86VK4 478 aa12.52□□□□□ -0.41
NELFE-205ENST00000441998 C4orf19Q8IY42 314 aa12.52□□□□□ -0.41
NELFE-205ENST00000441998 BANK1Q8NDB2 785 aa12.52□□□□□ -0.41
NELFE-205ENST00000441998 ADAMTS19Q8TE59 1207 aa12.52□□□□□ -0.41
NELFE-205ENST00000441998 TMEM40Q8WWA1 233 aa12.52□□□□□ -0.41
NELFE-205ENST00000441998 HAS1Q92839 578 aa12.52□□□□□ -0.41
NELFE-205ENST00000441998 OSMRQ99650 979 aa12.52□□□□□ -0.41
NELFE-205ENST00000441998 ADAM2Q99965 735 aa12.52□□□□□ -0.41
NELFE-205ENST00000441998 NSUN3Q9H649 340 aaKnown RBP12.52□□□□□ -0.41
NELFE-205ENST00000441998 AAASQ9NRG9 546 aa12.52□□□□□ -0.41
NELFE-205ENST00000441998 VAV3Q9UKW4 847 aa12.52□□□□□ -0.41
NELFE-205ENST00000441998 AKT3Q9Y243 479 aa12.52□□□□□ -0.41
NELFE-205ENST00000441998 GINS2Q9Y248 185 aa12.52□□□□□ -0.41
NELFE-205ENST00000441998 GTF3C3Q9Y5Q9 886 aa12.52□□□□□ -0.41
NELFE-205ENST00000441998 KAT6AQ92794 2004 aa12.52□□□□□ -0.41
NELFE-205ENST00000441998 MARCH6O60337 910 aa12.51□□□□□ -0.41
NELFE-205ENST00000441998 LYPLA2O95372 231 aa12.51□□□□□ -0.41
NELFE-205ENST00000441998 EOMESO95936 686 aa12.51□□□□□ -0.41
NELFE-205ENST00000441998 VTNP04004 478 aa12.51□□□□□ -0.41
NELFE-205ENST00000441998 CTNNB1P35222 781 aa12.51□□□□□ -0.41
NELFE-205ENST00000441998 CLCN3P51790 818 aa12.51□□□□□ -0.41
NELFE-205ENST00000441998 UBE3AQ05086 875 aa12.51□□□□□ -0.41
NELFE-205ENST00000441998 ORC2Q13416 577 aaPredicted RBP12.51□□□□□ -0.41
NELFE-205ENST00000441998 PCBP1Q15365 356 aaKnown RBP eCLIP12.51□□□□□ -0.41
NELFE-205ENST00000441998 SAFBQ15424 915 aaKnown RBP eCLIP12.51□□□□□ -0.41
NELFE-205ENST00000441998 UGCGQ16739 394 aa12.51□□□□□ -0.41
NELFE-205ENST00000441998 LEXMQ3ZCV2 418 aa12.51□□□□□ -0.41
NELFE-205ENST00000441998 KRT40Q6A162 431 aa12.51□□□□□ -0.41
NELFE-205ENST00000441998 OTUD6AQ7L8S5 288 aa12.51□□□□□ -0.41
NELFE-205ENST00000441998 FAM228AQ86W67 206 aa12.51□□□□□ -0.41
NELFE-205ENST00000441998 NECAB1Q8N987 351 aa12.51□□□□□ -0.41
NELFE-205ENST00000441998 OXER1Q8TDS5 423 aa12.51□□□□□ -0.41
NELFE-205ENST00000441998 PPP2R3CQ969Q6 453 aa12.51□□□□□ -0.41
NELFE-205ENST00000441998 UIMC1Q96RL1 719 aa12.51□□□□□ -0.41
NELFE-205ENST00000441998 UHRF1Q96T88 793 aaPredicted RBP12.51□□□□□ -0.41
NELFE-205ENST00000441998 GCOM2Q9BZD3 368 aaPredicted RBP12.51□□□□□ -0.41
NELFE-205ENST00000441998 ZSWIM4Q9H7M6 989 aa12.51□□□□□ -0.41
NELFE-205ENST00000441998 ATP6V0A4Q9HBG4 840 aa12.51□□□□□ -0.41
NELFE-205ENST00000441998 SH2B1Q9NRF2 756 aaPredicted RBP12.51□□□□□ -0.41
NELFE-205ENST00000441998 DACT1Q9NYF0 836 aa12.51□□□□□ -0.41
NELFE-205ENST00000441998 DAXXQ9UER7 740 aaPredicted RBP12.51□□□□□ -0.41
NELFE-205ENST00000441998 PLAGL2Q9UPG8 496 aa12.51□□□□□ -0.41
NELFE-205ENST00000441998 TTC3P53804 2025 aa12.5□□□□□ -0.41
NELFE-205ENST00000441998 A0A0U1RQF3 1178 aa12.5□□□□□ -0.41
NELFE-205ENST00000441998 FSD2A1L4K1 749 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms