RNA–Protein interactions for RNA: ENST00000440452.5

PCGF3-207, Transcript of polycomb group ring finger 3, humanhuman

TSL 2

Gene PCGF3, Length 3,609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-207ENST00000440452 LRRC55Q6ZSA7 311 aa13.48□□□□□ -0.25
PCGF3-207ENST00000440452 ANKRD42Q8N9B4 389 aa13.48□□□□□ -0.25
PCGF3-207ENST00000440452 LMBR1Q8WVP7 490 aa13.48□□□□□ -0.25
PCGF3-207ENST00000440452 CASKIN2Q8WXE0 1202 aa13.48□□□□□ -0.25
PCGF3-207ENST00000440452 ANKS1AQ92625 1134 aa13.48□□□□□ -0.25
PCGF3-207ENST00000440452 KLHL29Q96CT2 875 aa13.48□□□□□ -0.25
PCGF3-207ENST00000440452 NT5C3AQ9H0P0 336 aa13.48□□□□□ -0.25
PCGF3-207ENST00000440452 FBXL5Q9UKA1 691 aa13.48□□□□□ -0.25
PCGF3-207ENST00000440452 EVI5O60447 810 aa13.48□□□□□ -0.25
PCGF3-207ENST00000440452 FAM13AO94988 1023 aa13.48□□□□□ -0.25
PCGF3-207ENST00000440452 KRT13P13646 458 aa13.48□□□□□ -0.25
PCGF3-207ENST00000440452 GYS1P13807 737 aa13.48□□□□□ -0.25
PCGF3-207ENST00000440452 COPB2P35606 906 aa13.48□□□□□ -0.25
PCGF3-207ENST00000440452 LACTBP83111 547 aaPredicted RBP13.48□□□□□ -0.25
PCGF3-207ENST00000440452 MXRA7P84157 204 aa13.48□□□□□ -0.25
PCGF3-207ENST00000440452 SPRED3Q2MJR0 410 aa13.48□□□□□ -0.25
PCGF3-207ENST00000440452 THEMIS2Q5TEJ8 643 aa13.48□□□□□ -0.25
PCGF3-207ENST00000440452 OSBPL7Q9BZF2 842 aa13.48□□□□□ -0.25
PCGF3-207ENST00000440452 RIC8AQ9NPQ8 531 aa13.48□□□□□ -0.25
PCGF3-207ENST00000440452 CLRN2A0PK11 232 aa13.47□□□□□ -0.25
PCGF3-207ENST00000440452 SSR1P43307 286 aaKnown RBP13.47□□□□□ -0.25
PCGF3-207ENST00000440452 ARHGAP4P98171 946 aa13.47□□□□□ -0.25
PCGF3-207ENST00000440452 PSMD2Q13200 908 aa13.47□□□□□ -0.25
PCGF3-207ENST00000440452 TAF11Q15544 211 aa13.47□□□□□ -0.25
PCGF3-207ENST00000440452 ZC2HC1CQ53FD0 456 aaPredicted RBP13.47□□□□□ -0.25
PCGF3-207ENST00000440452 SCFD1Q8WVM8 642 aa13.47□□□□□ -0.25
PCGF3-207ENST00000440452 G3BP2Q9UN86 482 aaKnown RBP13.47□□□□□ -0.25
PCGF3-207ENST00000440452 ZC3H4Q9UPT8 1303 aaKnown RBP13.47□□□□□ -0.25
PCGF3-207ENST00000440452 CCDC189A1A4V9 331 aa13.47□□□□□ -0.25
PCGF3-207ENST00000440452 RAD51CO43502 376 aa13.47□□□□□ -0.25
PCGF3-207ENST00000440452 SERPING1P05155 500 aa13.47□□□□□ -0.25
PCGF3-207ENST00000440452 FXR2P51116 673 aaKnown RBP eCLIP13.47□□□□□ -0.25
PCGF3-207ENST00000440452 PPP2R2AP63151 447 aa13.47□□□□□ -0.25
PCGF3-207ENST00000440452 PTK2Q05397 1052 aa13.47□□□□□ -0.25
PCGF3-207ENST00000440452 KLHDC7AQ5VTJ3 777 aa13.47□□□□□ -0.25
PCGF3-207ENST00000440452 ERMNQ8TAM6 284 aa13.47□□□□□ -0.25
PCGF3-207ENST00000440452 RAPGEF5Q92565 580 aa13.47□□□□□ -0.25
PCGF3-207ENST00000440452 REEP2Q9BRK0 252 aa13.47□□□□□ -0.25
PCGF3-207ENST00000440452 TDRD3Q9H7E2 651 aaKnown RBP13.47□□□□□ -0.25
PCGF3-207ENST00000440452 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.47□□□□□ -0.25
PCGF3-207ENST00000440452 EME2A4GXA9 379 aaPredicted RBP13.47□□□□□ -0.25
PCGF3-207ENST00000440452 H0Y3Z8 333 aa13.47□□□□□ -0.25
PCGF3-207ENST00000440452 KRIT1O00522 736 aa13.47□□□□□ -0.25
PCGF3-207ENST00000440452 TLR2O60603 784 aa13.47□□□□□ -0.25
PCGF3-207ENST00000440452 CATSPER3Q86XQ3 398 aa13.47□□□□□ -0.25
PCGF3-207ENST00000440452 BAP1Q92560 729 aa13.47□□□□□ -0.25
PCGF3-207ENST00000440452 NOP53Q9NZM5 478 aaKnown RBP13.47□□□□□ -0.25
PCGF3-207ENST00000440452 DDTLA6NHG4 134 aaPredicted RBP13.46□□□□□ -0.25
PCGF3-207ENST00000440452 TCP10L2B9ZVM9 353 aa13.46□□□□□ -0.25
PCGF3-207ENST00000440452 BBOX1O75936 387 aa13.46□□□□□ -0.25
PCGF3-207ENST00000440452 MMEP08473 750 aa13.46□□□□□ -0.25
PCGF3-207ENST00000440452 CYP11B2P19099 503 aa13.46□□□□□ -0.25
PCGF3-207ENST00000440452 NMT1P30419 496 aaKnown RBP13.46□□□□□ -0.25
PCGF3-207ENST00000440452 RC3H1Q5TC82 1133 aaKnown RBP13.46□□□□□ -0.25
PCGF3-207ENST00000440452 PEX26Q7Z412 305 aa13.46□□□□□ -0.25
PCGF3-207ENST00000440452 SH3GL3Q99963 347 aa13.46□□□□□ -0.25
PCGF3-207ENST00000440452 PCIF1Q9H4Z3 704 aa13.46□□□□□ -0.25
PCGF3-207ENST00000440452 HOMER2Q9NSB8 354 aa13.46□□□□□ -0.25
PCGF3-207ENST00000440452 GCNT4Q9P109 453 aa13.46□□□□□ -0.25
PCGF3-207ENST00000440452 SWAP70Q9UH65 585 aa13.46□□□□□ -0.25
PCGF3-207ENST00000440452 PNMA2Q9UL42 364 aa13.46□□□□□ -0.25
PCGF3-207ENST00000440452 ATP6V0A2Q9Y487 856 aa13.46□□□□□ -0.25
PCGF3-207ENST00000440452 ATP6V1G2O95670 118 aa13.46□□□□□ -0.25
PCGF3-207ENST00000440452 GH2P01242 217 aa13.46□□□□□ -0.25
PCGF3-207ENST00000440452 TRIM49P0CI25 452 aa13.46□□□□□ -0.25
PCGF3-207ENST00000440452 TRIM49CP0CI26 452 aa13.46□□□□□ -0.25
PCGF3-207ENST00000440452 ATP11AP98196 1134 aa13.46□□□□□ -0.25
PCGF3-207ENST00000440452 LRRC14Q15048 493 aa13.46□□□□□ -0.25
PCGF3-207ENST00000440452 CCDC38Q502W7 563 aa13.46□□□□□ -0.25
PCGF3-207ENST00000440452 ALKBH5Q6P6C2 394 aaKnown RBP13.46□□□□□ -0.25
PCGF3-207ENST00000440452 PRCCQ92733 491 aaPredicted RBP13.46□□□□□ -0.25
PCGF3-207ENST00000440452 DNAJC19Q96DA6 116 aa13.46□□□□□ -0.25
PCGF3-207ENST00000440452 FAXDC2Q96IV6 333 aa13.46□□□□□ -0.25
PCGF3-207ENST00000440452 CEP72Q9P209 647 aa13.46□□□□□ -0.25
PCGF3-207ENST00000440452 TIAM2Q8IVF5 1701 aa13.46□□□□□ -0.25
PCGF3-207ENST00000440452 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.46□□□□□ -0.25
PCGF3-207ENST00000440452 F5H6K3 240 aa13.46□□□□□ -0.26
PCGF3-207ENST00000440452 DAPK3O43293 454 aa13.46□□□□□ -0.26
PCGF3-207ENST00000440452 LGR5O75473 907 aa13.46□□□□□ -0.26
PCGF3-207ENST00000440452 SHMT1P34896 483 aa13.46□□□□□ -0.26
PCGF3-207ENST00000440452 POLE2P56282 527 aa13.46□□□□□ -0.26
PCGF3-207ENST00000440452 KLRC3Q07444 240 aa13.46□□□□□ -0.26
PCGF3-207ENST00000440452 GPATCH4Q5T3I0 446 aaKnown RBP13.46□□□□□ -0.26
PCGF3-207ENST00000440452 OTUD6AQ7L8S5 288 aa13.46□□□□□ -0.26
PCGF3-207ENST00000440452 FBXO11Q86XK2 927 aa13.46□□□□□ -0.26
PCGF3-207ENST00000440452 ELMO3Q96BJ8 720 aa13.46□□□□□ -0.26
PCGF3-207ENST00000440452 INTS9Q9NV88 658 aaKnown RBP13.46□□□□□ -0.26
PCGF3-207ENST00000440452 HSD17B3P37058 310 aa13.45□□□□□ -0.26
PCGF3-207ENST00000440452 PDIA5Q14554 519 aa13.45□□□□□ -0.26
PCGF3-207ENST00000440452 WHAMMQ8TF30 809 aa13.45□□□□□ -0.26
PCGF3-207ENST00000440452 SORBS3O60504 671 aa13.45□□□□□ -0.26
PCGF3-207ENST00000440452 RASSF9O75901 435 aa13.45□□□□□ -0.26
PCGF3-207ENST00000440452 EPB41P11171 864 aaKnown RBP13.45□□□□□ -0.26
PCGF3-207ENST00000440452 CRKP46108 304 aa13.45□□□□□ -0.26
PCGF3-207ENST00000440452 ZNF211Q13398 564 aaPredicted RBP13.45□□□□□ -0.26
PCGF3-207ENST00000440452 VPS36Q86VN1 386 aa13.45□□□□□ -0.26
PCGF3-207ENST00000440452 SEPT12Q8IYM1 358 aa13.45□□□□□ -0.26
PCGF3-207ENST00000440452 DHX36Q9H2U1 1008 aaKnown RBP13.45□□□□□ -0.26
PCGF3-207ENST00000440452 ATP6V0A4Q9HBG4 840 aa13.45□□□□□ -0.26
PCGF3-207ENST00000440452 SNED1Q8TER0 1413 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms