RNA–Protein interactions for RNA: ENST00000438773.2

TRAPPC9-202, Transcript of trafficking protein particle complex 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC9, Length 4,297 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-202ENST00000438773 RPGRIP1Q96KN7 1286 aa12.56□□□□□ -0.4
TRAPPC9-202ENST00000438773 TAAR1Q96RJ0 339 aa12.56□□□□□ -0.4
TRAPPC9-202ENST00000438773 PNKPQ96T60 521 aa12.56□□□□□ -0.4
TRAPPC9-202ENST00000438773 USTQ9Y2C2 406 aa12.56□□□□□ -0.4
TRAPPC9-202ENST00000438773 DENND3A2RUS2 1198 aa12.56□□□□□ -0.4
TRAPPC9-202ENST00000438773 PIK3CAP42336 1068 aa12.56□□□□□ -0.4
TRAPPC9-202ENST00000438773 TFDP1Q14186 410 aa12.56□□□□□ -0.4
TRAPPC9-202ENST00000438773 FAM47CQ5HY64 1035 aa12.56□□□□□ -0.4
TRAPPC9-202ENST00000438773 INTS8Q75QN2 995 aaKnown RBP12.56□□□□□ -0.4
TRAPPC9-202ENST00000438773 RIT2Q99578 217 aa12.56□□□□□ -0.4
TRAPPC9-202ENST00000438773 VPS33BQ9H267 617 aa12.56□□□□□ -0.4
TRAPPC9-202ENST00000438773 MED24O75448 989 aa12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 CNGA1P29973 690 aa12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 YWHABP31946 246 aaKnown RBP12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 BACE1P56817 501 aa12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 FKBP1CQ5VVH2 108 aa12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 NLRP4Q96MN2 994 aa12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 PAIP2Q9BPZ3 127 aaKnown RBP12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 ATP6V0A4Q9HBG4 840 aa12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 PCDHA13Q9Y5I0 950 aa12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 GBP2P32456 591 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 GCLMP48507 274 aa12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 GABPAQ06546 454 aa12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 NEDD9Q14511 834 aa12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 PPP1R7Q15435 360 aa12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 KCTD16Q68DU8 428 aa12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 ALKBH5Q6P6C2 394 aaKnown RBP12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 HAUS6Q7Z4H7 955 aa12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 SRGAP1Q7Z6B7 1085 aa12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 CYP2W1Q8TAV3 490 aa12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 MKL1Q969V6 931 aa12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 CCDC114Q96M63 670 aa12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 JPH1Q9HDC5 661 aaPredicted RBP12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 SLC9A2Q9UBY0 812 aa12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 NFIBO00712 420 aa12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 TNNC2P02585 160 aa12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 CYP11B2P19099 503 aa12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 FOXR1Q6PIV2 292 aa12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 MOXD1Q6UVY6 613 aa12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 CHP1Q99653 195 aa12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 GINM1Q9NU53 330 aa12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 CEP72Q9P209 647 aa12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 FAN1Q9Y2M0 1017 aa12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 USP54Q70EL1 1684 aa12.55□□□□□ -0.4
TRAPPC9-202ENST00000438773 GOLGA6CA6NDK9 693 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 ZNF233A6NK53 670 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 WNT7AO00755 349 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 PDXKO00764 312 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 MOCS3O95396 460 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 GOLGA6DP0CG33 693 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 VCAM1P19320 739 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 PTK2Q05397 1052 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 CCDC25Q86WR0 208 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 RABGGTAQ92696 567 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 PPP1R16BQ96T49 567 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 GOLGA6AQ9NYA3 693 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 DDNO94850 711 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 TRIM49P0CI25 452 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 TRIM49CP0CI26 452 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 CXCR5P32302 372 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 MDM2Q00987 491 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 CFAP58Q5T655 872 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 SLC30A10Q6XR72 485 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 ZBTB33Q86T24 672 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 ZNF302Q9NR11 478 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 LRP6O75581 1613 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 NWD2Q9ULI1 1742 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 OSTNP61366 133 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 SHROOM1Q2M3G4 852 aaPredicted RBP12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 SELENOSQ9BQE4 189 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 ANKZF1Q9H8Y5 726 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 AGPAT5Q9NUQ2 364 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 PPP1R9AQ9ULJ8 1098 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 CAPN11Q9UMQ6 739 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 PITPNM2Q9BZ72 1349 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 MYBP10242 640 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 ARP10275 920 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 SARSP49591 514 aaKnown RBP12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 GUCY2FP51841 1108 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 TFAMQ00059 246 aaKnown RBP12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 CALCOCO2Q13137 446 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 FASTKD5Q7L8L6 764 aaKnown RBP12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 DNAJC12Q9UKB3 198 aa12.54□□□□□ -0.4
TRAPPC9-202ENST00000438773 MYZAPP0CAP1 466 aa12.53□□□□□ -0.4
TRAPPC9-202ENST00000438773 ZNF18P17022 549 aa12.53□□□□□ -0.4
TRAPPC9-202ENST00000438773 CYFIP1Q7L576 1253 aa12.53□□□□□ -0.4
TRAPPC9-202ENST00000438773 IFT20Q8IY31 132 aa12.53□□□□□ -0.4
TRAPPC9-202ENST00000438773 STRCQ7RTU9 1775 aa12.53□□□□□ -0.4
TRAPPC9-202ENST00000438773 FAM237AA0A1B0GTK4 181 aa12.53□□□□□ -0.4
TRAPPC9-202ENST00000438773 M0QZ92 97 aa12.53□□□□□ -0.4
TRAPPC9-202ENST00000438773 MYO1CO00159 1063 aa12.53□□□□□ -0.4
TRAPPC9-202ENST00000438773 OPA1O60313 960 aa12.53□□□□□ -0.4
TRAPPC9-202ENST00000438773 FTCDO95954 541 aa12.53□□□□□ -0.4
TRAPPC9-202ENST00000438773 ZC2HC1CQ53FD0 456 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC9-202ENST00000438773 SYT2Q8N9I0 419 aaPredicted RBP12.53□□□□□ -0.4
TRAPPC9-202ENST00000438773 NUDT12Q9BQG2 462 aa12.53□□□□□ -0.4
TRAPPC9-202ENST00000438773 ABCB6Q9NP58 842 aa12.53□□□□□ -0.4
TRAPPC9-202ENST00000438773 MKRN1Q9UHC7 482 aaKnown RBP12.53□□□□□ -0.4
TRAPPC9-202ENST00000438773 YDJCA8MPS7 323 aa12.53□□□□□ -0.4
TRAPPC9-202ENST00000438773 GYPCP04921 128 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms