RNA–Protein interactions for RNA: ENST00000438362.6

CSDE1-205, Transcript of cold shock domain containing E1, humanhuman

TSL 1 (best) BASIC

Gene CSDE1, Length 4,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-205ENST00000438362 SREK1Q8WXA9 508 aaKnown RBP7.22□□□□□ -1.25
CSDE1-205ENST00000438362 ARHGEF1Q92888 912 aaKnown RBP7.22□□□□□ -1.25
CSDE1-205ENST00000438362 DBNDD1Q9H9R9 158 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 PIK3C2AO00443 1686 aa7.22□□□□□ -1.25
CSDE1-205ENST00000438362 RIC1Q4ADV7 1423 aa7.21□□□□□ -1.25
CSDE1-205ENST00000438362 A0A087X0T9 212 aa7.21□□□□□ -1.25
CSDE1-205ENST00000438362 POC1B-GALNT4F8VUJ3 575 aa7.21□□□□□ -1.25
CSDE1-205ENST00000438362 FOXP2O15409 715 aa7.21□□□□□ -1.25
CSDE1-205ENST00000438362 PPIP5K2O43314 1243 aa7.21□□□□□ -1.25
CSDE1-205ENST00000438362 FAM228BP0C875 321 aa7.21□□□□□ -1.25
CSDE1-205ENST00000438362 SOX5P35711 763 aa7.21□□□□□ -1.25
CSDE1-205ENST00000438362 PPP4CP60510 307 aa7.21□□□□□ -1.25
CSDE1-205ENST00000438362 MEA1Q16626 185 aa7.21□□□□□ -1.25
CSDE1-205ENST00000438362 FBXW10Q5XX13 1052 aa7.21□□□□□ -1.25
CSDE1-205ENST00000438362 NUGGCQ68CJ6 796 aa7.21□□□□□ -1.25
CSDE1-205ENST00000438362 CC2D2BQ6DHV5 1058 aa7.21□□□□□ -1.25
CSDE1-205ENST00000438362 ARHGAP24Q8N264 748 aa7.21□□□□□ -1.25
CSDE1-205ENST00000438362 SUPT20HQ8NEM7 779 aa7.21□□□□□ -1.25
CSDE1-205ENST00000438362 LRRC8CQ8TDW0 803 aa7.21□□□□□ -1.25
CSDE1-205ENST00000438362 CHMP6Q96FZ7 201 aa7.21□□□□□ -1.25
CSDE1-205ENST00000438362 CALR3Q96L12 384 aaKnown RBP7.21□□□□□ -1.25
CSDE1-205ENST00000438362 RNPC3Q96LT9 517 aaKnown RBP7.21□□□□□ -1.25
CSDE1-205ENST00000438362 DUSP9Q99956 384 aaKnown RBP7.21□□□□□ -1.25
CSDE1-205ENST00000438362 TXNDC16Q9P2K2 825 aa7.21□□□□□ -1.25
CSDE1-205ENST00000438362 SEL1LQ9UBV2 794 aa7.21□□□□□ -1.25
CSDE1-205ENST00000438362 FAM208AQ9UK61 1670 aaKnown RBP7.21□□□□□ -1.26
CSDE1-205ENST00000438362 H0YCG3 227 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 TTI1O43156 1089 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 CIB2O75838 187 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 CHRNA3P32297 505 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 PHBP35232 272 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 CACNB3P54284 484 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 GALCP54803 685 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 GPSM2P81274 684 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 ADCY1Q08828 1119 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 BFSP1Q12934 665 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 NBPF9Q3BBW0 867 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 KAZNQ674X7 775 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 RCSD1Q6JBY9 416 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 SMIM5Q71RC9 77 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 TBC1D1Q86TI0 1168 aaPredicted RBP7.21□□□□□ -1.26
CSDE1-205ENST00000438362 LARGE2Q8N3Y3 721 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 DEPTORQ8TB45 409 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 ARL8AQ96BM9 186 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 HVCN1Q96D96 273 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 TSNARE1Q96NA8 513 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 ISCUQ9H1K1 167 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 TBK1Q9UHD2 729 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 UBR1Q8IWV7 1749 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 FAM196BA6NMK8 535 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 TRIM49P0CI25 452 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 TRIM49CP0CI26 452 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 SEC24CP53992 1094 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 CCDC38Q502W7 563 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 LGSNQ5TDP6 509 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 PPP1R21Q6ZMI0 780 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 CLEC10AQ8IUN9 316 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 PALM2Q8IXS6 379 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 GBP7Q8N8V2 638 aaPredicted RBP7.21□□□□□ -1.26
CSDE1-205ENST00000438362 JDP2Q8WYK2 163 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 PPP1R12CQ9BZL4 782 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 INTS2Q9H0H0 1204 aaKnown RBP7.21□□□□□ -1.26
CSDE1-205ENST00000438362 HSD3B7Q9H2F3 369 aa7.21□□□□□ -1.26
CSDE1-205ENST00000438362 F5H6K3 240 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 SLC37A4O43826 429 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 STAMBPO95630 424 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 EYA4O95677 639 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 GH2P01242 217 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 FTLP02792 175 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-205ENST00000438362 GCLMP48507 274 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 AARSP49588 968 aaKnown RBP eCLIP7.2□□□□□ -1.26
CSDE1-205ENST00000438362 ITIH3Q06033 890 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 KLRC3Q07444 240 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 DRP2Q13474 957 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 DHX34Q14147 1143 aaKnown RBP7.2□□□□□ -1.26
CSDE1-205ENST00000438362 TRIP13Q15645 432 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-205ENST00000438362 ARHGEF16Q5VV41 709 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 DDX42Q86XP3 938 aaKnown RBP eCLIP7.2□□□□□ -1.26
CSDE1-205ENST00000438362 NLGN1Q8N2Q7 840 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 MSL3Q8N5Y2 521 aaKnown RBP7.2□□□□□ -1.26
CSDE1-205ENST00000438362 XXYLT1Q8NBI6 393 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 OR2W6PQ8NHA6 318 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 RSAD2Q8WXG1 361 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 DYDC2Q96IM9 177 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 EIF2AK1Q9BQI3 630 aaKnown RBP7.2□□□□□ -1.26
CSDE1-205ENST00000438362 DNAJC17Q9NVM6 304 aaKnown RBP7.2□□□□□ -1.26
CSDE1-205ENST00000438362 PITPNM2Q9BZ72 1349 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 SLC16A3O15427 465 aaKnown RBP7.2□□□□□ -1.26
CSDE1-205ENST00000438362 PBX1P40424 430 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 PRELPP51888 382 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 BYSLQ13895 437 aaKnown RBP7.2□□□□□ -1.26
CSDE1-205ENST00000438362 MARCH10Q8NA82 808 aaPredicted RBP7.2□□□□□ -1.26
CSDE1-205ENST00000438362 FAM81BQ96LP2 452 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 GOLPH3Q9H4A6 298 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 AZI2Q9H6S1 392 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 KLC4Q9NSK0 619 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 DAGLAQ9Y4D2 1042 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 MST1RQ04912 1400 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 PFASO15067 1338 aa7.2□□□□□ -1.26
CSDE1-205ENST00000438362 GOLGA8IPA6NC78 632 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 117.2 ms