RNA–Protein interactions for RNA: ENST00000438075.6

LST1-217, leukocyte specific transcript 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LST1, Length 764 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LST1-217ENST00000438075 SUPT20HL2P0C7V6 817 aa13.73□□□□□ -0.21
LST1-217ENST00000438075 RFX1P22670 979 aa13.73□□□□□ -0.21
LST1-217ENST00000438075 NUCB2P80303 420 aa13.73□□□□□ -0.21
LST1-217ENST00000438075 ARHGAP1Q07960 439 aa13.73□□□□□ -0.21
LST1-217ENST00000438075 TROAPQ12815 778 aa13.73□□□□□ -0.21
LST1-217ENST00000438075 OTOP2Q7RTS6 562 aa13.73□□□□□ -0.21
LST1-217ENST00000438075 TIFAQ96CG3 184 aa13.73□□□□□ -0.21
LST1-217ENST00000438075 HINFPQ9BQA5 517 aa13.73□□□□□ -0.21
LST1-217ENST00000438075 PDCD2LQ9BRP1 358 aa13.73□□□□□ -0.21
LST1-217ENST00000438075 USP26Q9BXU7 913 aa13.73□□□□□ -0.21
LST1-217ENST00000438075 LSG1Q9H089 658 aaKnown RBP13.73□□□□□ -0.21
LST1-217ENST00000438075 RIOX1Q9H6W3 641 aa13.73□□□□□ -0.21
LST1-217ENST00000438075 LY9Q9HBG7 655 aa13.73□□□□□ -0.21
LST1-217ENST00000438075 MRVI1Q9Y6F6 885 aa13.73□□□□□ -0.21
LST1-217ENST00000438075 PRC1O43663 620 aa13.72□□□□□ -0.21
LST1-217ENST00000438075 FGBP02675 491 aa13.72□□□□□ -0.21
LST1-217ENST00000438075 XRCC6P12956 609 aaKnown RBP eCLIP13.72□□□□□ -0.21
LST1-217ENST00000438075 FOSL2P15408 326 aa13.72□□□□□ -0.21
LST1-217ENST00000438075 WEE1P30291 646 aa13.72□□□□□ -0.21
LST1-217ENST00000438075 RASIP1Q5U651 963 aa13.72□□□□□ -0.21
LST1-217ENST00000438075 NFRKBQ6P4R8 1299 aa13.72□□□□□ -0.21
LST1-217ENST00000438075 NFXL1Q6ZNB6 911 aa13.72□□□□□ -0.21
LST1-217ENST00000438075 FCHSD1Q86WN1 690 aa13.72□□□□□ -0.21
LST1-217ENST00000438075 ZNF654Q8IZM8 581 aa13.72□□□□□ -0.21
LST1-217ENST00000438075 GALNT6Q8NCL4 622 aa13.72□□□□□ -0.21
LST1-217ENST00000438075 IL31RAQ8NI17 732 aa13.72□□□□□ -0.21
LST1-217ENST00000438075 CTCFLQ8NI51 663 aaPredicted RBP13.72□□□□□ -0.21
LST1-217ENST00000438075 IGDCC4Q8TDY8 1250 aa13.72□□□□□ -0.21
LST1-217ENST00000438075 SCARF2Q96GP6 870 aaPredicted RBP13.72□□□□□ -0.21
LST1-217ENST00000438075 MTIF3Q9H2K0 278 aaKnown RBP13.72□□□□□ -0.21
LST1-217ENST00000438075 ANO2Q9NQ90 1003 aa13.72□□□□□ -0.21
LST1-217ENST00000438075 AVENQ9NQS1 362 aaPredicted RBP13.72□□□□□ -0.21
LST1-217ENST00000438075 MARK1Q9P0L2 795 aa13.72□□□□□ -0.21
LST1-217ENST00000438075 CXXC1Q9P0U4 656 aaPredicted RBP13.72□□□□□ -0.21
LST1-217ENST00000438075 ZMIZ1Q9ULJ6 1067 aa13.72□□□□□ -0.21
LST1-217ENST00000438075 TMEM265A0A087WTH1 108 aa13.71□□□□□ -0.21
LST1-217ENST00000438075 PNMA6FA0A0J9YX94 578 aa13.71□□□□□ -0.21
LST1-217ENST00000438075 GCOM1H8Y6P7 765 aaPredicted RBP13.71□□□□□ -0.21
LST1-217ENST00000438075 SLC27A2O14975 620 aa13.71□□□□□ -0.21
LST1-217ENST00000438075 EPB41L2O43491 1005 aaKnown RBP13.71□□□□□ -0.21
LST1-217ENST00000438075 EIF3JO75822 258 aaKnown RBP13.71□□□□□ -0.21
LST1-217ENST00000438075 POLR2MP0CAP2 368 aa13.71□□□□□ -0.21
LST1-217ENST00000438075 ZNF286BP0CG31 522 aa13.71□□□□□ -0.21
LST1-217ENST00000438075 HOXB4P17483 251 aaPredicted RBP13.71□□□□□ -0.21
LST1-217ENST00000438075 GHRHRQ02643 423 aa13.71□□□□□ -0.21
LST1-217ENST00000438075 TRAF1Q13077 416 aa13.71□□□□□ -0.21
LST1-217ENST00000438075 COL9A3Q14050 684 aaPredicted RBP13.71□□□□□ -0.21
LST1-217ENST00000438075 PGM5Q15124 567 aa13.71□□□□□ -0.21
LST1-217ENST00000438075 DEFB128Q7Z7B8 93 aa13.71□□□□□ -0.21
LST1-217ENST00000438075 MAFAQ8NHW3 353 aaPredicted RBP13.71□□□□□ -0.21
LST1-217ENST00000438075 EDARADDQ8WWZ3 215 aa13.71□□□□□ -0.21
LST1-217ENST00000438075 HERVK_113Q902F9 699 aa13.71□□□□□ -0.21
LST1-217ENST00000438075 PBX4Q9BYU1 374 aa13.71□□□□□ -0.21
LST1-217ENST00000438075 DDX41Q9UJV9 622 aaKnown RBP13.71□□□□□ -0.21
LST1-217ENST00000438075 DOCK5Q9H7D0 1870 aa13.71□□□□□ -0.21
LST1-217ENST00000438075 COL6A3P12111 3177 aa13.71□□□□□ -0.22
LST1-217ENST00000438075 CCDC69A6NI79 296 aa13.7□□□□□ -0.22
LST1-217ENST00000438075 DLL1O00548 723 aa13.7□□□□□ -0.22
LST1-217ENST00000438075 DDAH1O94760 285 aa13.7□□□□□ -0.22
LST1-217ENST00000438075 EPXP11678 715 aa13.7□□□□□ -0.22
LST1-217ENST00000438075 RXRAP19793 462 aa13.7□□□□□ -0.22
LST1-217ENST00000438075 CASTP20810 708 aaKnown RBP13.7□□□□□ -0.22
LST1-217ENST00000438075 CCND2P30279 289 aa13.7□□□□□ -0.22
LST1-217ENST00000438075 MCM5P33992 734 aa13.7□□□□□ -0.22
LST1-217ENST00000438075 GRIN2CQ14957 1233 aa13.7□□□□□ -0.22
LST1-217ENST00000438075 DGKDQ16760 1214 aa13.7□□□□□ -0.22
LST1-217ENST00000438075 CREB3L3Q68CJ9 461 aa13.7□□□□□ -0.22
LST1-217ENST00000438075 RAB11FIP4Q86YS3 637 aa13.7□□□□□ -0.22
LST1-217ENST00000438075 DHX37Q8IY37 1157 aaKnown RBP13.7□□□□□ -0.22
LST1-217ENST00000438075 RPUSD2Q8IZ73 545 aaKnown RBP13.7□□□□□ -0.22
LST1-217ENST00000438075 KAT2BQ92831 832 aa13.7□□□□□ -0.22
LST1-217ENST00000438075 SUSD3Q96L08 255 aa13.7□□□□□ -0.22
LST1-217ENST00000438075 ALG1Q9BT22 464 aa13.7□□□□□ -0.22
LST1-217ENST00000438075 ZNF576Q9H609 170 aa13.7□□□□□ -0.22
LST1-217ENST00000438075 GRPEL1Q9HAV7 217 aa13.7□□□□□ -0.22
LST1-217ENST00000438075 MAP3K20Q9NYL2 800 aaKnown RBP13.7□□□□□ -0.22
LST1-217ENST00000438075 NOVA2Q9UNW9 492 aaKnown RBP13.7□□□□□ -0.22
LST1-217ENST00000438075 CNTNAP5Q8WYK1 1306 aa13.69□□□□□ -0.22
LST1-217ENST00000438075 SH2B2O14492 632 aaPredicted RBP13.69□□□□□ -0.22
LST1-217ENST00000438075 PLEKHA8P1O95397 391 aa13.69□□□□□ -0.22
LST1-217ENST00000438075 KIF5BP33176 963 aa13.69□□□□□ -0.22
LST1-217ENST00000438075 IRS1P35568 1242 aa13.69□□□□□ -0.22
LST1-217ENST00000438075 PTPN11Q06124 597 aaPredicted RBP13.69□□□□□ -0.22
LST1-217ENST00000438075 ELOAQ14241 798 aaKnown RBP13.69□□□□□ -0.22
LST1-217ENST00000438075 PTGISQ16647 500 aa13.69□□□□□ -0.22
LST1-217ENST00000438075 ZNF468Q5VIY5 522 aaPredicted RBP13.69□□□□□ -0.22
LST1-217ENST00000438075 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.69□□□□□ -0.22
LST1-217ENST00000438075 CMTR1Q8N1G2 835 aaKnown RBP13.69□□□□□ -0.22
LST1-217ENST00000438075 SAMD3Q8N6K7 520 aa13.69□□□□□ -0.22
LST1-217ENST00000438075 RETREG2Q8NC44 543 aa13.69□□□□□ -0.22
LST1-217ENST00000438075 PPTC7Q8NI37 304 aa13.69□□□□□ -0.22
LST1-217ENST00000438075 FAM200AQ8TCP9 573 aa13.69□□□□□ -0.22
LST1-217ENST00000438075 RRP36Q96EU6 259 aaKnown RBP13.69□□□□□ -0.22
LST1-217ENST00000438075 LRRC2Q9BYS8 371 aa13.69□□□□□ -0.22
LST1-217ENST00000438075 NKX2-4Q9H2Z4 354 aa13.69□□□□□ -0.22
LST1-217ENST00000438075 DNMT3AQ9Y6K1 912 aaPredicted RBP13.69□□□□□ -0.22
LST1-217ENST00000438075 TRIP12Q14669 1992 aaPredicted RBP13.69□□□□□ -0.22
LST1-217ENST00000438075 GGPS1O95749 300 aa13.68□□□□□ -0.22
LST1-217ENST00000438075 UBA1P22314 1058 aaKnown RBP13.68□□□□□ -0.22
LST1-217ENST00000438075 MCM2P49736 904 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms