RNA–Protein interactions for RNA: ENST00000437951.5

PTCH1-209, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 8,049 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-209ENST00000437951 NRBP1Q9UHY1 535 aa12.29□□□□□ -0.44
PTCH1-209ENST00000437951 MFAP3LO75121 409 aa12.29□□□□□ -0.44
PTCH1-209ENST00000437951 FOSP01100 380 aaPredicted RBP12.29□□□□□ -0.44
PTCH1-209ENST00000437951 XPAP23025 273 aaPredicted RBP12.29□□□□□ -0.44
PTCH1-209ENST00000437951 SLC7A5Q01650 507 aa12.29□□□□□ -0.44
PTCH1-209ENST00000437951 IMPG1Q17R60 797 aa12.29□□□□□ -0.44
PTCH1-209ENST00000437951 MAEAQ7L5Y9 396 aa12.29□□□□□ -0.44
PTCH1-209ENST00000437951 UVRAGQ9P2Y5 699 aa12.29□□□□□ -0.44
PTCH1-209ENST00000437951 SNUPNO95149 360 aaKnown RBP12.29□□□□□ -0.44
PTCH1-209ENST00000437951 SNF8Q96H20 258 aa12.29□□□□□ -0.44
PTCH1-209ENST00000437951 QKIQ96PU8 341 aaKnown RBP eCLIP12.29□□□□□ -0.442e-7■■■■■ 29
PTCH1-209ENST00000437951 ARMT1Q9H993 441 aa12.29□□□□□ -0.44
PTCH1-209ENST00000437951 BLMP54132 1417 aaPredicted RBP12.29□□□□□ -0.44
PTCH1-209ENST00000437951 SOX5P35711 763 aa12.29□□□□□ -0.44
PTCH1-209ENST00000437951 EIF4A3P38919 411 aaKnown RBP12.29□□□□□ -0.44
PTCH1-209ENST00000437951 FAM173BQ6P4H8 233 aa12.29□□□□□ -0.44
PTCH1-209ENST00000437951 CHURC1Q8WUH1 139 aa12.29□□□□□ -0.44
PTCH1-209ENST00000437951 FAM129AQ9BZQ8 928 aa12.29□□□□□ -0.44
PTCH1-209ENST00000437951 FTOQ9C0B1 505 aaKnown RBP eCLIP12.29□□□□□ -0.44
PTCH1-209ENST00000437951 PURAQ00577 322 aaKnown RBP12.29□□□□□ -0.44
PTCH1-209ENST00000437951 BYSLQ13895 437 aaKnown RBP12.29□□□□□ -0.44
PTCH1-209ENST00000437951 COG1Q8WTW3 980 aa12.29□□□□□ -0.44
PTCH1-209ENST00000437951 CATSPER2Q96P56 530 aa12.29□□□□□ -0.44
PTCH1-209ENST00000437951 GINM1Q9NU53 330 aa12.29□□□□□ -0.44
PTCH1-209ENST00000437951 SHANK2Q9UPX8 1470 aa12.29□□□□□ -0.44
PTCH1-209ENST00000437951 TRAPPC8Q9Y2L5 1435 aa12.29□□□□□ -0.44
PTCH1-209ENST00000437951 FGGP02679 453 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 STAT4Q14765 748 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 ARMCX4Q5H9R4 360 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 C4orf50Q6ZRC1 276 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 XAGE2Q96GT9 111 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 CCT7Q99832 543 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 ABCC1P33527 1531 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 CARMIL3Q8ND23 1372 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 PPIP5K2O43314 1243 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 METTL22Q9BUU2 404 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-209ENST00000437951 SLC39A2Q9NP94 309 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 EIF4G3O43432 1585 aaKnown RBP12.28□□□□□ -0.44
PTCH1-209ENST00000437951 ADGRL1O94910 1474 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 RALBP11234 206 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 DDB1Q16531 1140 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 AGBL2Q5U5Z8 902 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 RTL3Q8N8U3 475 aaKnown RBP12.28□□□□□ -0.44
PTCH1-209ENST00000437951 ATP11CQ8NB49 1132 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 RDH13Q8NBN7 331 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 LPIN2Q92539 896 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 PSTPIP2Q9H939 334 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 MRPL11Q9Y3B7 192 aaKnown RBP12.28□□□□□ -0.44
PTCH1-209ENST00000437951 USP15Q9Y4E8 981 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-209ENST00000437951 PITPNM2Q9BZ72 1349 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 MARK3P27448 753 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 TMOD1P28289 359 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 PTK2BQ14289 1009 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 FAF2Q96CS3 445 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 MRPL1Q9BYD6 325 aaKnown RBP12.28□□□□□ -0.44
PTCH1-209ENST00000437951 C14orf93Q9H972 538 aaKnown RBP12.28□□□□□ -0.44
PTCH1-209ENST00000437951 MDH1P40925 334 aaKnown RBP12.28□□□□□ -0.44
PTCH1-209ENST00000437951 ADCY1Q08828 1119 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 PROM2Q8N271 834 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 PLBD2Q8NHP8 589 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 SMCR8Q8TEV9 937 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-209ENST00000437951 EME1Q96AY2 570 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 TUBA8Q9NY65 449 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-209ENST00000437951 ADAM30Q9UKF2 790 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 UGGT2Q9NYU1 1516 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 DYTNA2CJ06 578 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 CXCR5P32302 372 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 KCNJ6P48051 423 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 FAM160B1Q5W0V3 765 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 CCNYQ8ND76 341 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 WDR64B1ANS9 1081 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 APOA4P06727 396 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 DLATP10515 647 aaKnown RBP12.28□□□□□ -0.44
PTCH1-209ENST00000437951 CLK1P49759 484 aaKnown RBP12.28□□□□□ -0.44
PTCH1-209ENST00000437951 ZNF483Q8TF39 744 aaPredicted RBP12.28□□□□□ -0.44
PTCH1-209ENST00000437951 TBC1D22AQ8WUA7 517 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 FAM227BQ96M60 508 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 GINS2Q9Y248 185 aa12.28□□□□□ -0.44
PTCH1-209ENST00000437951 MTO1Q9Y2Z2 717 aaKnown RBP12.28□□□□□ -0.44
PTCH1-209ENST00000437951 DLGAP3O95886 979 aa12.27□□□□□ -0.44
PTCH1-209ENST00000437951 TMC5Q6UXY8 1006 aa12.27□□□□□ -0.44
PTCH1-209ENST00000437951 CROCCP3Q8IVE0 287 aa12.27□□□□□ -0.44
PTCH1-209ENST00000437951 ACRBPQ8NEB7 543 aa12.27□□□□□ -0.44
PTCH1-209ENST00000437951 ZCRB1Q8TBF4 217 aaKnown RBP12.27□□□□□ -0.44
PTCH1-209ENST00000437951 GTSE1Q9NYZ3 720 aa12.27□□□□□ -0.44
PTCH1-209ENST00000437951 MAN1B1Q9UKM7 699 aa12.27□□□□□ -0.44
PTCH1-209ENST00000437951 RWDD3Q9Y3V2 267 aa12.27□□□□□ -0.44
PTCH1-209ENST00000437951 TK2O00142 265 aa12.27□□□□□ -0.44
PTCH1-209ENST00000437951 FTCDO95954 541 aa12.27□□□□□ -0.44
PTCH1-209ENST00000437951 TCF3P15923 654 aa12.27□□□□□ -0.44
PTCH1-209ENST00000437951 PTGDRQ13258 359 aa12.27□□□□□ -0.44
PTCH1-209ENST00000437951 B4GALNT2Q8NHY0 566 aa12.27□□□□□ -0.44
PTCH1-209ENST00000437951 IL17RAQ96F46 866 aa12.27□□□□□ -0.44
PTCH1-209ENST00000437951 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.27□□□□□ -0.44
PTCH1-209ENST00000437951 GPR141Q7Z602 305 aa12.27□□□□□ -0.45
PTCH1-209ENST00000437951 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.27□□□□□ -0.45
PTCH1-209ENST00000437951 GMEB1Q9Y692 573 aa12.27□□□□□ -0.45
PTCH1-209ENST00000437951 CSTF3Q12996 717 aaKnown RBP12.27□□□□□ -0.45
PTCH1-209ENST00000437951 BBS9Q3SYG4 887 aa12.27□□□□□ -0.45
PTCH1-209ENST00000437951 CENPPQ6IPU0 288 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms