RNA–Protein interactions for RNA: ENST00000436427.1

YBX1-203, Transcript of Y-box binding protein 1, humanhuman

TSL 1 (best)

Gene YBX1, Length 1,524 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-203ENST00000436427 KAT2BQ92831 832 aa23.68■■□□□ 1.38
YBX1-203ENST00000436427 TIPINQ9BVW5 301 aa23.68■■□□□ 1.38
YBX1-203ENST00000436427 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.68■■□□□ 1.382e-11■■■■■ 64.9
YBX1-203ENST00000436427 COL4A3BPQ9Y5P4 624 aa23.68■■□□□ 1.38
YBX1-203ENST00000436427 FRMD3A2A2Y4 597 aa23.67■■□□□ 1.38
YBX1-203ENST00000436427 SFI1A8K8P3 1242 aa23.67■■□□□ 1.38
YBX1-203ENST00000436427 KPNA6O60684 536 aa23.67■■□□□ 1.38
YBX1-203ENST00000436427 INSRRP14616 1297 aa23.67■■□□□ 1.38
YBX1-203ENST00000436427 RFC5P40937 340 aa23.67■■□□□ 1.38
YBX1-203ENST00000436427 IGBP1P78318 339 aa23.67■■□□□ 1.38
YBX1-203ENST00000436427 PURAQ00577 322 aaKnown RBP23.67■■□□□ 1.38
YBX1-203ENST00000436427 TBC1D8BQ0IIM8 1120 aa23.67■■□□□ 1.38
YBX1-203ENST00000436427 MFSD10Q14728 455 aa23.67■■□□□ 1.38
YBX1-203ENST00000436427 EMC2Q15006 297 aa23.67■■□□□ 1.38
YBX1-203ENST00000436427 KIAA0753Q2KHM9 967 aa23.67■■□□□ 1.38
YBX1-203ENST00000436427 ZNF658Q5TYW1 1059 aaPredicted RBP23.67■■□□□ 1.38
YBX1-203ENST00000436427 MCPH1Q8NEM0 835 aa23.67■■□□□ 1.38
YBX1-203ENST00000436427 TRAPPC12Q8WVT3 735 aa23.67■■□□□ 1.38
YBX1-203ENST00000436427 HPS3Q969F9 1004 aa23.67■■□□□ 1.38
YBX1-203ENST00000436427 KATNAL1Q9BW62 490 aa23.67■■□□□ 1.38
YBX1-203ENST00000436427 UNC93B1Q9H1C4 597 aa23.67■■□□□ 1.38
YBX1-203ENST00000436427 DNAJC25Q9H1X3 360 aa23.67■■□□□ 1.38
YBX1-203ENST00000436427 GRPEL1Q9HAV7 217 aa23.67■■□□□ 1.38
YBX1-203ENST00000436427 PPME1Q9Y570 386 aa23.67■■□□□ 1.38
YBX1-203ENST00000436427 ZBTB42B2RXF5 422 aa23.66■■□□□ 1.38
YBX1-203ENST00000436427 PSEN2P49810 448 aa23.66■■□□□ 1.38
YBX1-203ENST00000436427 NKX3-2P78367 333 aa23.66■■□□□ 1.38
YBX1-203ENST00000436427 ZNF484Q5JVG2 852 aa23.66■■□□□ 1.38
YBX1-203ENST00000436427 RNF180Q86T96 592 aa23.66■■□□□ 1.38
YBX1-203ENST00000436427 SMYD4Q8IYR2 804 aaPredicted RBP23.66■■□□□ 1.38
YBX1-203ENST00000436427 MYCT1Q8N699 235 aa23.66■■□□□ 1.38
YBX1-203ENST00000436427 DRC1Q96MC2 740 aa23.66■■□□□ 1.38
YBX1-203ENST00000436427 CEP89Q96ST8 783 aa23.66■■□□□ 1.38
YBX1-203ENST00000436427 DHX33Q9H6R0 707 aaKnown RBP23.66■■□□□ 1.38
YBX1-203ENST00000436427 PARVGQ9HBI0 331 aa23.66■■□□□ 1.38
YBX1-203ENST00000436427 GPRC5CQ9NQ84 441 aa23.66■■□□□ 1.38
YBX1-203ENST00000436427 TBC1D7Q9P0N9 293 aa23.66■■□□□ 1.38
YBX1-203ENST00000436427 GDAQ9Y2T3 454 aa23.66■■□□□ 1.38
YBX1-203ENST00000436427 GAP43P17677 238 aa23.65■■□□□ 1.38
YBX1-203ENST00000436427 PPFIA1Q13136 1202 aa23.65■■□□□ 1.38
YBX1-203ENST00000436427 FBXO46Q6PJ61 603 aaPredicted RBP23.65■■□□□ 1.38
YBX1-203ENST00000436427 SFR1Q86XK3 245 aa23.65■■□□□ 1.38
YBX1-203ENST00000436427 MTG1Q9BT17 334 aaPredicted RBP23.65■■□□□ 1.38
YBX1-203ENST00000436427 SLC39A2Q9NP94 309 aa23.65■■□□□ 1.38
YBX1-203ENST00000436427 XPNPEP1Q9NQW7 623 aa23.65■■□□□ 1.38
YBX1-203ENST00000436427 CST5P28325 142 aaPredicted RBP23.64■■□□□ 1.38
YBX1-203ENST00000436427 SOX10P56693 466 aa23.64■■□□□ 1.38
YBX1-203ENST00000436427 EHHADHQ08426 723 aa23.64■■□□□ 1.38
YBX1-203ENST00000436427 STK4Q13043 487 aa23.64■■□□□ 1.38
YBX1-203ENST00000436427 MAPK7Q13164 816 aa23.64■■□□□ 1.38
YBX1-203ENST00000436427 PSMD2Q13200 908 aa23.64■■□□□ 1.38
YBX1-203ENST00000436427 KCNA10Q16322 511 aa23.64■■□□□ 1.38
YBX1-203ENST00000436427 FAM26FQ5R3K3 315 aa23.64■■□□□ 1.38
YBX1-203ENST00000436427 LHX8Q68G74 356 aa23.64■■□□□ 1.38
YBX1-203ENST00000436427 CXCL17Q6UXB2 119 aa23.64■■□□□ 1.38
YBX1-203ENST00000436427 C11orf57Q6ZUT1 292 aaPredicted RBP23.64■■□□□ 1.38
YBX1-203ENST00000436427 DAW1Q8N136 415 aa23.64■■□□□ 1.38
YBX1-203ENST00000436427 MLKLQ8NB16 471 aa23.64■■□□□ 1.38
YBX1-203ENST00000436427 KLHDC9Q8NEP7 349 aa23.64■■□□□ 1.38
YBX1-203ENST00000436427 PDLIM7Q9NR12 457 aa23.64■■□□□ 1.38
YBX1-203ENST00000436427 COL1A2P08123 1366 aa23.64■■□□□ 1.37
YBX1-203ENST00000436427 MAFO75444 373 aaPredicted RBP23.64■■□□□ 1.37
YBX1-203ENST00000436427 ASGR1P07306 291 aa23.64■■□□□ 1.37
YBX1-203ENST00000436427 ZNF131P52739 623 aa23.64■■□□□ 1.37
YBX1-203ENST00000436427 MTFR1Q15390 333 aa23.64■■□□□ 1.37
YBX1-203ENST00000436427 GRIK4Q16099 956 aa23.64■■□□□ 1.37
YBX1-203ENST00000436427 GAS2L3Q86XJ1 694 aa23.64■■□□□ 1.37
YBX1-203ENST00000436427 EXOC8Q8IYI6 725 aa23.64■■□□□ 1.37
YBX1-203ENST00000436427 PCSK9Q8NBP7 692 aaKnown RBP23.64■■□□□ 1.37
YBX1-203ENST00000436427 PPP1R13LQ8WUF5 828 aa23.64■■□□□ 1.37
YBX1-203ENST00000436427 KIFAP3Q92845 792 aa23.64■■□□□ 1.37
YBX1-203ENST00000436427 GTPBP4Q9BZE4 634 aaKnown RBP23.64■■□□□ 1.37
YBX1-203ENST00000436427 DACH1Q9UI36 760 aa23.64■■□□□ 1.37
YBX1-203ENST00000436427 SMIM10L2AP0DMW4 78 aa23.63■■□□□ 1.37
YBX1-203ENST00000436427 SMIM10L2BP0DMW5 78 aa23.63■■□□□ 1.37
YBX1-203ENST00000436427 CCL5P13501 91 aa23.63■■□□□ 1.37
YBX1-203ENST00000436427 LRRC41Q15345 812 aa23.63■■□□□ 1.37
YBX1-203ENST00000436427 ODR4Q5SWX8 454 aa23.63■■□□□ 1.37
YBX1-203ENST00000436427 TMEM143Q96AN5 459 aa23.63■■□□□ 1.37
YBX1-203ENST00000436427 JPH2Q9BR39 696 aaPredicted RBP23.63■■□□□ 1.37
YBX1-203ENST00000436427 NAT10Q9H0A0 1025 aaKnown RBP23.63■■□□□ 1.37
YBX1-203ENST00000436427 POLR3FQ9H1D9 316 aaPredicted RBP23.63■■□□□ 1.37
YBX1-203ENST00000436427 SUGCTQ9HAC7 445 aa23.63■■□□□ 1.37
YBX1-203ENST00000436427 LARSQ9P2J5 1176 aaKnown RBP23.63■■□□□ 1.37
YBX1-203ENST00000436427 MAPK8IP1Q9UQF2 711 aa23.63■■□□□ 1.37
YBX1-203ENST00000436427 HAS3O00219 553 aa23.62■■□□□ 1.37
YBX1-203ENST00000436427 PKN2Q16513 984 aaKnown RBP23.62■■□□□ 1.37
YBX1-203ENST00000436427 KIAA0895Q8NCT3 520 aa23.62■■□□□ 1.37
YBX1-203ENST00000436427 RNF208Q9H0X6 261 aa23.62■■□□□ 1.37
YBX1-203ENST00000436427 MRPL44Q9H9J2 332 aaKnown RBP23.62■■□□□ 1.37
YBX1-203ENST00000436427 SEL1LQ9UBV2 794 aa23.62■■□□□ 1.37
YBX1-203ENST00000436427 C22orf31O95567 290 aa23.61■■□□□ 1.37
YBX1-203ENST00000436427 PLS3P13797 630 aa23.61■■□□□ 1.37
YBX1-203ENST00000436427 CCSAPQ6IQ19 270 aaPredicted RBP23.61■■□□□ 1.37
YBX1-203ENST00000436427 KLHL10Q6JEL2 608 aa23.61■■□□□ 1.37
YBX1-203ENST00000436427 FAM178BQ8IXR5 827 aa23.61■■□□□ 1.37
YBX1-203ENST00000436427 LRRC71Q8N4P6 559 aa23.61■■□□□ 1.37
YBX1-203ENST00000436427 METTL13Q8N6R0 699 aa23.61■■□□□ 1.37
YBX1-203ENST00000436427 RETREG2Q8NC44 543 aa23.61■■□□□ 1.37
YBX1-203ENST00000436427 ZBTB10Q96DT7 871 aa23.61■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms