RNA–Protein interactions for RNA: ENST00000436324.5

HMGN1-207, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-207ENST00000436324 LLPHQ9BRT6 129 aaKnown RBP20.57■□□□□ 0.88
HMGN1-207ENST00000436324 ERVK-5Q9HDB9 667 aa20.57■□□□□ 0.88
HMGN1-207ENST00000436324 SH2B1Q9NRF2 756 aaPredicted RBP20.57■□□□□ 0.88
HMGN1-207ENST00000436324 ST3GAL5Q9UNP4 418 aa20.57■□□□□ 0.88
HMGN1-207ENST00000436324 WNT7AO00755 349 aa20.56■□□□□ 0.88
HMGN1-207ENST00000436324 TBX3O15119 743 aa20.56■□□□□ 0.88
HMGN1-207ENST00000436324 RABEP1Q15276 862 aa20.56■□□□□ 0.88
HMGN1-207ENST00000436324 TARBP2Q15633 366 aaKnown RBP20.56■□□□□ 0.88
HMGN1-207ENST00000436324 PLA2G4FQ68DD2 849 aa20.56■□□□□ 0.88
HMGN1-207ENST00000436324 FIBCD1Q8N539 461 aa20.56■□□□□ 0.88
HMGN1-207ENST00000436324 LINC01465Q8N7H1 131 aa20.56■□□□□ 0.88
HMGN1-207ENST00000436324 NIFKQ9BYG3 293 aaKnown RBP20.56■□□□□ 0.88
HMGN1-207ENST00000436324 TSPYL2Q9H2G4 693 aaPredicted RBP20.56■□□□□ 0.88
HMGN1-207ENST00000436324 UPF2Q9HAU5 1272 aaKnown RBP20.56■□□□□ 0.88
HMGN1-207ENST00000436324 CDH23Q9H251 3354 aa20.55■□□□□ 0.88
HMGN1-207ENST00000436324 EVPLQ92817 2033 aa20.55■□□□□ 0.88
HMGN1-207ENST00000436324 CHD9Q3L8U1 2897 aa20.55■□□□□ 0.88
HMGN1-207ENST00000436324 GPR182O15218 404 aa20.55■□□□□ 0.88
HMGN1-207ENST00000436324 MGEA5O60502 916 aa20.55■□□□□ 0.88
HMGN1-207ENST00000436324 POU3F3P20264 500 aaPredicted RBP20.55■□□□□ 0.88
HMGN1-207ENST00000436324 QARSP47897 775 aaKnown RBP20.55■□□□□ 0.88
HMGN1-207ENST00000436324 DRP2Q13474 957 aa20.55■□□□□ 0.88
HMGN1-207ENST00000436324 EPC2Q52LR7 807 aa20.55■□□□□ 0.88
HMGN1-207ENST00000436324 FAM228AQ86W67 206 aa20.55■□□□□ 0.88
HMGN1-207ENST00000436324 SLFN12Q8IYM2 578 aa20.55■□□□□ 0.88
HMGN1-207ENST00000436324 FAM184AQ8NB25 1140 aa20.55■□□□□ 0.88
HMGN1-207ENST00000436324 SCLT1Q96NL6 688 aa20.55■□□□□ 0.88
HMGN1-207ENST00000436324 RGL1Q9NZL6 768 aa20.55■□□□□ 0.88
HMGN1-207ENST00000436324 DENND3A2RUS2 1198 aa20.54■□□□□ 0.88
HMGN1-207ENST00000436324 P4HBP07237 508 aaKnown RBP20.54■□□□□ 0.88
HMGN1-207ENST00000436324 HMGN5P82970 282 aaKnown RBP20.54■□□□□ 0.88
HMGN1-207ENST00000436324 BTG3Q14201 252 aaPredicted RBP20.54■□□□□ 0.88
HMGN1-207ENST00000436324 EPHA7Q15375 998 aa20.54■□□□□ 0.88
HMGN1-207ENST00000436324 CALCRLQ16602 461 aa20.54■□□□□ 0.88
HMGN1-207ENST00000436324 ODR4Q5SWX8 454 aa20.54■□□□□ 0.88
HMGN1-207ENST00000436324 ANO5Q75V66 913 aa20.54■□□□□ 0.88
HMGN1-207ENST00000436324 TMEM192Q8IY95 271 aa20.54■□□□□ 0.88
HMGN1-207ENST00000436324 DYDC2Q96IM9 177 aa20.54■□□□□ 0.88
HMGN1-207ENST00000436324 CEP89Q96ST8 783 aa20.54■□□□□ 0.88
HMGN1-207ENST00000436324 ADAM2Q99965 735 aa20.54■□□□□ 0.88
HMGN1-207ENST00000436324 ADAMTS10Q9H324 1103 aa20.54■□□□□ 0.88
HMGN1-207ENST00000436324 WRAP73Q9P2S5 460 aaPredicted RBP20.54■□□□□ 0.88
HMGN1-207ENST00000436324 LRFN2Q9ULH4 789 aa20.54■□□□□ 0.88
HMGN1-207ENST00000436324 NEMFO60524 1076 aa20.53■□□□□ 0.88
HMGN1-207ENST00000436324 DGKIO75912 1065 aa20.53■□□□□ 0.88
HMGN1-207ENST00000436324 GATMP50440 423 aa20.53■□□□□ 0.88
HMGN1-207ENST00000436324 GPC3P51654 580 aa20.53■□□□□ 0.88
HMGN1-207ENST00000436324 NPEPPSP55786 919 aa20.53■□□□□ 0.88
HMGN1-207ENST00000436324 CYP4A11Q02928 519 aa20.53■□□□□ 0.88
HMGN1-207ENST00000436324 CTTNQ14247 550 aaKnown RBP20.53■□□□□ 0.88
HMGN1-207ENST00000436324 PAN2Q504Q3 1202 aaKnown RBP20.53■□□□□ 0.88
HMGN1-207ENST00000436324 NPAS4Q8IUM7 802 aa20.53■□□□□ 0.88
HMGN1-207ENST00000436324 ZNF579Q8NAF0 562 aaKnown RBP20.53■□□□□ 0.88
HMGN1-207ENST00000436324 NLRP7Q8WX94 980 aa20.53■□□□□ 0.88
HMGN1-207ENST00000436324 LXNQ9BS40 222 aa20.53■□□□□ 0.88
HMGN1-207ENST00000436324 THEGQ9P2T0 379 aa20.53■□□□□ 0.88
HMGN1-207ENST00000436324 ADGRA3Q8IWK6 1321 aa20.53■□□□□ 0.88
HMGN1-207ENST00000436324 ST18O60284 1047 aa20.52■□□□□ 0.88
HMGN1-207ENST00000436324 DKC1O60832 514 aaKnown RBP eCLIP20.52■□□□□ 0.88
HMGN1-207ENST00000436324 STAG3L1P0CL83 205 aa20.52■□□□□ 0.88
HMGN1-207ENST00000436324 FGFR4P22455 802 aa20.52■□□□□ 0.88
HMGN1-207ENST00000436324 MCM7P33993 719 aa20.52■□□□□ 0.88
HMGN1-207ENST00000436324 CTNNB1P35222 781 aa20.52■□□□□ 0.88
HMGN1-207ENST00000436324 TXKP42681 527 aa20.52■□□□□ 0.88
HMGN1-207ENST00000436324 SPIRE1Q08AE8 756 aa20.52■□□□□ 0.88
HMGN1-207ENST00000436324 GPM6BQ13491 265 aa20.52■□□□□ 0.88
HMGN1-207ENST00000436324 GNL2Q13823 731 aaKnown RBP20.52■□□□□ 0.88
HMGN1-207ENST00000436324 TPH2Q8IWU9 490 aa20.52■□□□□ 0.88
HMGN1-207ENST00000436324 ZNF689Q96CS4 500 aaPredicted RBP20.52■□□□□ 0.88
HMGN1-207ENST00000436324 SAMD11Q96NU1 681 aa20.52■□□□□ 0.88
HMGN1-207ENST00000436324 COL25A1Q9BXS0 654 aaPredicted RBP20.52■□□□□ 0.88
HMGN1-207ENST00000436324 CYP26B1Q9NR63 512 aa20.52■□□□□ 0.88
HMGN1-207ENST00000436324 PCDHA12Q9UN75 941 aa20.52■□□□□ 0.88
HMGN1-207ENST00000436324 PCDHB7Q9Y5E2 793 aa20.52■□□□□ 0.88
HMGN1-207ENST00000436324 LOXHD1Q8IVV2 1947 aa20.51■□□□□ 0.87
HMGN1-207ENST00000436324 CSDE1O75534 798 aaKnown RBP20.51■□□□□ 0.87
HMGN1-207ENST00000436324 EIF4BP23588 611 aaKnown RBP20.51■□□□□ 0.87
HMGN1-207ENST00000436324 SARSP49591 514 aaKnown RBP20.51■□□□□ 0.87
HMGN1-207ENST00000436324 DNM2P50570 870 aa20.51■□□□□ 0.87
HMGN1-207ENST00000436324 FBXO18Q8NFZ0 1043 aa20.51■□□□□ 0.87
HMGN1-207ENST00000436324 CEP170P1Q96L14 293 aa20.51■□□□□ 0.87
HMGN1-207ENST00000436324 TTC12Q9H892 705 aaPredicted RBP20.51■□□□□ 0.87
HMGN1-207ENST00000436324 RC3H2Q9HBD1 1191 aaKnown RBP20.51■□□□□ 0.87
HMGN1-207ENST00000436324 RGS18Q9NS28 235 aa20.51■□□□□ 0.87
HMGN1-207ENST00000436324 BMP2KQ9NSY1 1161 aaPredicted RBP20.51■□□□□ 0.87
HMGN1-207ENST00000436324 SUCLA2Q9P2R7 463 aaPredicted RBP20.51■□□□□ 0.87
HMGN1-207ENST00000436324 PRRC2BQ5JSZ5 2229 aaKnown RBP20.51■□□□□ 0.87
HMGN1-207ENST00000436324 WDR81Q562E7 1941 aa20.51■□□□□ 0.87
HMGN1-207ENST00000436324 IGKV6-21A0A0C4DH24 114 aa20.5■□□□□ 0.87
HMGN1-207ENST00000436324 ZBTB39O15060 712 aa20.5■□□□□ 0.87
HMGN1-207ENST00000436324 MAFO75444 373 aaPredicted RBP20.5■□□□□ 0.87
HMGN1-207ENST00000436324 ZNF174Q15697 407 aa20.5■□□□□ 0.87
HMGN1-207ENST00000436324 RHPN2Q8IUC4 686 aa20.5■□□□□ 0.87
HMGN1-207ENST00000436324 CRIPAKQ8N1N5 446 aa20.5■□□□□ 0.87
HMGN1-207ENST00000436324 EIF2AK1Q9BQI3 630 aaKnown RBP20.5■□□□□ 0.87
HMGN1-207ENST00000436324 TMEM60Q9H2L4 133 aa20.5■□□□□ 0.87
HMGN1-207ENST00000436324 C1orf112Q9NSG2 853 aa20.5■□□□□ 0.87
HMGN1-207ENST00000436324 LMCD1Q9NZU5 365 aa20.5■□□□□ 0.87
HMGN1-207ENST00000436324 COL4A4P53420 1690 aaPredicted RBP20.5■□□□□ 0.87
HMGN1-207ENST00000436324 TTC3P53804 2025 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms