RNA–Protein interactions for RNA: ENST00000436177.5

VPS50-203, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 603 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-203ENST00000436177 MMP1P03956 469 aa8.8□□□□□ -1
VPS50-203ENST00000436177 ARP10275 920 aa8.8□□□□□ -1
VPS50-203ENST00000436177 GNA11P29992 359 aa8.8□□□□□ -1
VPS50-203ENST00000436177 NDUFV1P49821 464 aa8.8□□□□□ -1
VPS50-203ENST00000436177 ITGB3BPQ13352 177 aaPredicted RBP8.8□□□□□ -1
VPS50-203ENST00000436177 CLUL1Q15846 466 aa8.8□□□□□ -1
VPS50-203ENST00000436177 TMEM266Q2M3C6 531 aa8.8□□□□□ -1
VPS50-203ENST00000436177 NAALADL2Q58DX5 795 aa8.8□□□□□ -1
VPS50-203ENST00000436177 ZNF484Q5JVG2 852 aa8.8□□□□□ -1
VPS50-203ENST00000436177 BLOC1S2Q6QNY1 142 aa8.8□□□□□ -1
VPS50-203ENST00000436177 MTHFD1LQ6UB35 978 aa8.8□□□□□ -1
VPS50-203ENST00000436177 PACS2Q86VP3 889 aa8.8□□□□□ -1
VPS50-203ENST00000436177 METTL13Q8N6R0 699 aa8.8□□□□□ -1
VPS50-203ENST00000436177 CCDC148Q8NFR7 591 aa8.8□□□□□ -1
VPS50-203ENST00000436177 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.8□□□□□ -1
VPS50-203ENST00000436177 CYP2W1Q8TAV3 490 aa8.8□□□□□ -1
VPS50-203ENST00000436177 BICD2Q8TD16 824 aa8.8□□□□□ -1
VPS50-203ENST00000436177 NEK9Q8TD19 979 aa8.8□□□□□ -1
VPS50-203ENST00000436177 ATP8B4Q8TF62 1192 aa8.8□□□□□ -1
VPS50-203ENST00000436177 CLP1Q92989 425 aaKnown RBP8.8□□□□□ -1
VPS50-203ENST00000436177 ZBTB10Q96DT7 871 aa8.8□□□□□ -1
VPS50-203ENST00000436177 JAKMIP1Q96N16 626 aaKnown RBP8.8□□□□□ -1
VPS50-203ENST00000436177 MAP7D2Q96T17 732 aa8.8□□□□□ -1
VPS50-203ENST00000436177 PCYT2Q99447 389 aa8.8□□□□□ -1
VPS50-203ENST00000436177 ZNF577Q9BSK1 485 aa8.8□□□□□ -1
VPS50-203ENST00000436177 IGFLR1Q9H665 355 aa8.8□□□□□ -1
VPS50-203ENST00000436177 AGO3Q9H9G7 860 aaKnown RBP8.8□□□□□ -1
VPS50-203ENST00000436177 TBC1D22BQ9NU19 505 aa8.8□□□□□ -1
VPS50-203ENST00000436177 TMEM260Q9NX78 707 aa8.8□□□□□ -1
VPS50-203ENST00000436177 BRPF3Q9ULD4 1205 aa8.8□□□□□ -1
VPS50-203ENST00000436177 CEP131Q9UPN4 1083 aa8.8□□□□□ -1
VPS50-203ENST00000436177 PCDHB7Q9Y5E2 793 aa8.8□□□□□ -1
VPS50-203ENST00000436177 PCDHB12Q9Y5F1 795 aa8.8□□□□□ -1
VPS50-203ENST00000436177 MRPL42Q9Y6G3 142 aaKnown RBP8.8□□□□□ -1
VPS50-203ENST00000436177 COL1A2P08123 1366 aa8.8□□□□□ -1
VPS50-203ENST00000436177 ESYT2A0FGR8 921 aa8.79□□□□□ -1
VPS50-203ENST00000436177 FSD2A1L4K1 749 aa8.79□□□□□ -1
VPS50-203ENST00000436177 PI4K2BG5E9Z4 385 aa8.79□□□□□ -1
VPS50-203ENST00000436177 RBAK-RBAKDNI3L0D1 243 aa8.79□□□□□ -1
VPS50-203ENST00000436177 GPR182O15218 404 aa8.79□□□□□ -1
VPS50-203ENST00000436177 DCXO43602 365 aa8.79□□□□□ -1
VPS50-203ENST00000436177 GPR37L1O60883 481 aa8.79□□□□□ -1
VPS50-203ENST00000436177 PSAPP07602 524 aa8.79□□□□□ -1
VPS50-203ENST00000436177 SRGAP2BP0DMP2 458 aa8.79□□□□□ -1
VPS50-203ENST00000436177 KLRC1P26715 233 aa8.79□□□□□ -1
VPS50-203ENST00000436177 TMOD1P28289 359 aa8.79□□□□□ -1
VPS50-203ENST00000436177 EXOSC10Q01780 885 aaKnown RBP8.79□□□□□ -1
VPS50-203ENST00000436177 COL9A3Q14050 684 aaPredicted RBP8.79□□□□□ -1
VPS50-203ENST00000436177 PFKFB3Q16875 520 aaPredicted RBP8.79□□□□□ -1
VPS50-203ENST00000436177 SWSAP1Q6NVH7 229 aa8.79□□□□□ -1
VPS50-203ENST00000436177 TRMT1LQ7Z2T5 733 aaKnown RBP8.79□□□□□ -1
VPS50-203ENST00000436177 ADHFE1Q8IWW8 467 aa8.79□□□□□ -1
VPS50-203ENST00000436177 SMAP1Q8IYB5 467 aaPredicted RBP8.79□□□□□ -1
VPS50-203ENST00000436177 ABI1Q8IZP0 508 aa8.79□□□□□ -1
VPS50-203ENST00000436177 MICAL1Q8TDZ2 1067 aa8.79□□□□□ -1
VPS50-203ENST00000436177 BRF1Q92994 677 aa8.79□□□□□ -1
VPS50-203ENST00000436177 P2RX5Q93086 422 aa8.79□□□□□ -1
VPS50-203ENST00000436177 FAM167AQ96KS9 214 aa8.79□□□□□ -1
VPS50-203ENST00000436177 ALG13Q9NP73 1137 aaKnown RBP8.79□□□□□ -1
VPS50-203ENST00000436177 C1orf112Q9NSG2 853 aa8.79□□□□□ -1
VPS50-203ENST00000436177 PTPRSQ13332 1948 aa8.79□□□□□ -1
VPS50-203ENST00000436177 KDM3AQ9Y4C1 1321 aa8.79□□□□□ -1
VPS50-203ENST00000436177 MYO7AQ13402 2215 aa8.78□□□□□ -1
VPS50-203ENST00000436177 TBKBP1A7MCY6 615 aa8.78□□□□□ -1
VPS50-203ENST00000436177 PRR33A8MZF0 331 aa8.78□□□□□ -1
VPS50-203ENST00000436177 WDR64B1ANS9 1081 aa8.78□□□□□ -1
VPS50-203ENST00000436177 HOXA2O43364 376 aa8.78□□□□□ -1
VPS50-203ENST00000436177 REC8O95072 547 aa8.78□□□□□ -1
VPS50-203ENST00000436177 CCNE2O96020 404 aa8.78□□□□□ -1
VPS50-203ENST00000436177 PSMA5P28066 241 aa8.78□□□□□ -1
VPS50-203ENST00000436177 SARSP49591 514 aaKnown RBP8.78□□□□□ -1
VPS50-203ENST00000436177 ZP2Q05996 745 aa8.78□□□□□ -1
VPS50-203ENST00000436177 APOBRQ0VD83 1088 aa8.78□□□□□ -1
VPS50-203ENST00000436177 FUT2Q10981 343 aa8.78□□□□□ -1
VPS50-203ENST00000436177 HYAL1Q12794 435 aa8.78□□□□□ -1
VPS50-203ENST00000436177 SMAD4Q13485 552 aaKnown RBP8.78□□□□□ -1
VPS50-203ENST00000436177 KIZQ2M2Z5 673 aa8.78□□□□□ -1
VPS50-203ENST00000436177 ADCK5Q3MIX3 580 aa8.78□□□□□ -1
VPS50-203ENST00000436177 TSGA10IPQ3SY00 556 aa8.78□□□□□ -1
VPS50-203ENST00000436177 PRR16Q569H4 304 aa8.78□□□□□ -1
VPS50-203ENST00000436177 ZNF746Q6NUN9 644 aaPredicted RBP8.78□□□□□ -1
VPS50-203ENST00000436177 ABHD15Q6UXT9 468 aa8.78□□□□□ -1
VPS50-203ENST00000436177 SLC24A5Q71RS6 500 aa8.78□□□□□ -1
VPS50-203ENST00000436177 CCDC60Q8IWA6 550 aaPredicted RBP8.78□□□□□ -1
VPS50-203ENST00000436177 TRIM22Q8IYM9 498 aa8.78□□□□□ -1
VPS50-203ENST00000436177 THNSL1Q8IYQ7 743 aa8.78□□□□□ -1
VPS50-203ENST00000436177 LINC01599Q8WXQ3 324 aa8.78□□□□□ -1
VPS50-203ENST00000436177 ZNF689Q96CS4 500 aaPredicted RBP8.78□□□□□ -1
VPS50-203ENST00000436177 PPP1R16BQ96T49 567 aa8.78□□□□□ -1
VPS50-203ENST00000436177 ADAM2Q99965 735 aa8.78□□□□□ -1
VPS50-203ENST00000436177 RC3H2Q9HBD1 1191 aaKnown RBP8.78□□□□□ -1
VPS50-203ENST00000436177 ATP6V0A4Q9HBG4 840 aa8.78□□□□□ -1
VPS50-203ENST00000436177 CD320Q9NPF0 282 aa8.78□□□□□ -1
VPS50-203ENST00000436177 CD207Q9UJ71 328 aa8.78□□□□□ -1
VPS50-203ENST00000436177 PLAGL2Q9UPG8 496 aa8.78□□□□□ -1
VPS50-203ENST00000436177 AKT3Q9Y243 479 aa8.78□□□□□ -1
VPS50-203ENST00000436177 ARIH1Q9Y4X5 557 aaPredicted RBP8.78□□□□□ -1
VPS50-203ENST00000436177 FAM86B1E9PN63 330 aa8.77□□□□□ -1.01
VPS50-203ENST00000436177 CPLX1O14810 134 aa8.77□□□□□ -1.01
VPS50-203ENST00000436177 MAGEB2O15479 319 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms