RNA–Protein interactions for RNA: ENST00000432954.1

CCDC171-202, Transcript of coiled-coil domain containing 171, humanhuman

TSL 2

Gene CCDC171, Length 2,181 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-202ENST00000432954 EXOSC9Q06265 439 aaKnown RBP11.75□□□□□ -0.53
CCDC171-202ENST00000432954 RUNX1T1Q06455 604 aa11.75□□□□□ -0.53
CCDC171-202ENST00000432954 RASGRF1Q13972 1273 aa11.75□□□□□ -0.53
CCDC171-202ENST00000432954 QPCTQ16769 361 aa11.75□□□□□ -0.53
CCDC171-202ENST00000432954 TTC22Q5TAA0 569 aa11.75□□□□□ -0.53
CCDC171-202ENST00000432954 BTBD8Q5XKL5 378 aa11.75□□□□□ -0.53
CCDC171-202ENST00000432954 LZTR1Q8N653 840 aa11.75□□□□□ -0.53
CCDC171-202ENST00000432954 ANKRD53Q8N9V6 530 aa11.75□□□□□ -0.53
CCDC171-202ENST00000432954 BBOF1Q8ND07 529 aa11.75□□□□□ -0.53
CCDC171-202ENST00000432954 ANGPTL6Q8NI99 470 aa11.75□□□□□ -0.53
CCDC171-202ENST00000432954 FBXO41Q8TF61 875 aa11.75□□□□□ -0.53
CCDC171-202ENST00000432954 RSAD2Q8WXG1 361 aa11.75□□□□□ -0.53
CCDC171-202ENST00000432954 PRCCQ92733 491 aaPredicted RBP11.75□□□□□ -0.53
CCDC171-202ENST00000432954 CTRCQ99895 268 aa11.75□□□□□ -0.53
CCDC171-202ENST00000432954 MXD3Q9BW11 206 aa11.75□□□□□ -0.53
CCDC171-202ENST00000432954 FANCEQ9HB96 536 aa11.75□□□□□ -0.53
CCDC171-202ENST00000432954 SPC25Q9HBM1 224 aa11.75□□□□□ -0.53
CCDC171-202ENST00000432954 POLG2Q9UHN1 485 aa11.75□□□□□ -0.53
CCDC171-202ENST00000432954 HDAC9Q9UKV0 1011 aa11.75□□□□□ -0.53
CCDC171-202ENST00000432954 VANGL2Q9ULK5 521 aa11.75□□□□□ -0.53
CCDC171-202ENST00000432954 CD2APQ9Y5K6 639 aa11.75□□□□□ -0.53
CCDC171-202ENST00000432954 PPRC1Q5VV67 1664 aaKnown RBP11.74□□□□□ -0.53
CCDC171-202ENST00000432954 AFF2P51816 1311 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 A0A1W2PRQ8 180 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 SH3PXD2BA1X283 911 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 GOLGA8MH3BSY2 632 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 PIK3CDO00329 1044 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 APAF1O14727 1248 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 ZC3H11AO75152 810 aaKnown RBP eCLIP11.74□□□□□ -0.53
CCDC171-202ENST00000432954 FYNP06241 537 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 PABPC1P11940 636 aaKnown RBP11.74□□□□□ -0.53
CCDC171-202ENST00000432954 ZKSCAN1P17029 563 aaPredicted RBP11.74□□□□□ -0.53
CCDC171-202ENST00000432954 IFNA8P32881 189 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 PRCPP42785 496 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 PTPROQ16827 1216 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 AKAP4Q5JQC9 854 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 WDR44Q5JSH3 913 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 TRAPPC3LQ5T215 181 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 DENND2CQ68D51 928 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 LRRTM3Q86VH5 581 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 NELL1Q92832 810 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 ZNF333Q96JL9 665 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 ACAP3Q96P50 834 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 MOGAT1Q96PD6 335 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 UNKQ9C0B0 810 aaKnown RBP11.74□□□□□ -0.53
CCDC171-202ENST00000432954 SCAND2PQ9GZW5 306 aaPredicted RBP11.74□□□□□ -0.53
CCDC171-202ENST00000432954 ARHGEF3Q9NR81 526 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 FARSBQ9NSD9 589 aaKnown RBP11.74□□□□□ -0.53
CCDC171-202ENST00000432954 ARMC1Q9NVT9 282 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 CLIC5Q9NZA1 410 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 GMIPQ9P107 970 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 IQGAP2Q13576 1575 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 KIAA0586Q9BVV6 1533 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 CPLX1O14810 134 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 DDHD2O94830 711 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 GYS1P13807 737 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 TMOD1P28289 359 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 CDK7P50613 346 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 RAD23BP54727 409 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 PLTPP55058 493 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 ZC3H6P61129 1189 aaKnown RBP11.74□□□□□ -0.53
CCDC171-202ENST00000432954 TCIRG1Q13488 830 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 KLHL38Q2WGJ6 581 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 FCRLBQ6BAA4 426 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 C1orf228Q6PIY5 440 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 ARHGAP24Q8N264 748 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 AOPEPQ8N6M6 819 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 CCDC197Q8NCU1 140 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 STK32AQ8WU08 396 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 TAF1DQ9H5J8 278 aaPredicted RBP11.74□□□□□ -0.53
CCDC171-202ENST00000432954 KLHL3Q9UH77 587 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 MTMR6Q9Y217 621 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 TRAF3IP3Q9Y228 551 aa11.74□□□□□ -0.53
CCDC171-202ENST00000432954 ACEP12821 1306 aa11.73□□□□□ -0.53
CCDC171-202ENST00000432954 JCADQ9P266 1359 aa11.73□□□□□ -0.53
CCDC171-202ENST00000432954 SIGLEC16A6NMB1 481 aa11.73□□□□□ -0.53
CCDC171-202ENST00000432954 GUCY1B2O75343 617 aa11.73□□□□□ -0.53
CCDC171-202ENST00000432954 PHBP35232 272 aa11.73□□□□□ -0.53
CCDC171-202ENST00000432954 GSSP48637 474 aa11.73□□□□□ -0.53
CCDC171-202ENST00000432954 NCALDP61601 193 aa11.73□□□□□ -0.53
CCDC171-202ENST00000432954 KCNJ2P63252 427 aa11.73□□□□□ -0.53
CCDC171-202ENST00000432954 CD83Q01151 205 aa11.73□□□□□ -0.53
CCDC171-202ENST00000432954 Q3C1V9 767 aa11.73□□□□□ -0.53
CCDC171-202ENST00000432954 ZCWPW2Q504Y3 356 aa11.73□□□□□ -0.53
CCDC171-202ENST00000432954 SPOPLQ6IQ16 392 aa11.73□□□□□ -0.53
CCDC171-202ENST00000432954 MARK2Q7KZI7 788 aaKnown RBP11.73□□□□□ -0.53
CCDC171-202ENST00000432954 TMC7Q7Z402 723 aa11.73□□□□□ -0.53
CCDC171-202ENST00000432954 TMA16Q96EY4 203 aaKnown RBP11.73□□□□□ -0.53
CCDC171-202ENST00000432954 NRBF2Q96F24 287 aa11.73□□□□□ -0.53
CCDC171-202ENST00000432954 ZSCAN31Q96LW9 406 aaPredicted RBP11.73□□□□□ -0.53
CCDC171-202ENST00000432954 GPATCH1Q9BRR8 931 aaKnown RBP11.73□□□□□ -0.53
CCDC171-202ENST00000432954 CALN1Q9BXU9 219 aa11.73□□□□□ -0.53
CCDC171-202ENST00000432954 PPP1R12CQ9BZL4 782 aa11.73□□□□□ -0.53
CCDC171-202ENST00000432954 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.73□□□□□ -0.53
CCDC171-202ENST00000432954 MRPL11Q9Y3B7 192 aaKnown RBP11.73□□□□□ -0.53
CCDC171-202ENST00000432954 PLA2R1Q13018 1463 aa11.73□□□□□ -0.53
CCDC171-202ENST00000432954 HDAC3O15379 428 aa11.72□□□□□ -0.53
CCDC171-202ENST00000432954 ICMTO60725 284 aa11.72□□□□□ -0.53
CCDC171-202ENST00000432954 OR5F1O95221 314 aa11.72□□□□□ -0.53
CCDC171-202ENST00000432954 ATG7O95352 703 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms