RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 PAK1Q13153 545 aa20.2■□□□□ 0.82
HMGN1-206ENST00000431390 NCAPHQ15003 741 aa20.2■□□□□ 0.82
HMGN1-206ENST00000431390 HERC4Q5GLZ8 1057 aaPredicted RBP20.2■□□□□ 0.82
HMGN1-206ENST00000431390 PLA2G4FQ68DD2 849 aa20.2■□□□□ 0.82
HMGN1-206ENST00000431390 FAM167AQ96KS9 214 aa20.2■□□□□ 0.82
HMGN1-206ENST00000431390 SLC39A2Q9NP94 309 aa20.2■□□□□ 0.82
HMGN1-206ENST00000431390 SEL1LQ9UBV2 794 aa20.2■□□□□ 0.82
HMGN1-206ENST00000431390 SEPT9Q9UHD8 586 aaPredicted RBP20.2■□□□□ 0.82
HMGN1-206ENST00000431390 RWDD2AQ9UIY3 292 aa20.2■□□□□ 0.82
HMGN1-206ENST00000431390 PCDHA2Q9Y5H9 948 aa20.2■□□□□ 0.82
HMGN1-206ENST00000431390 SYNRGQ9UMZ2 1314 aa20.19■□□□□ 0.82
HMGN1-206ENST00000431390 PSMA7O14818 248 aa20.19■□□□□ 0.82
HMGN1-206ENST00000431390 FAM13AO94988 1023 aa20.19■□□□□ 0.82
HMGN1-206ENST00000431390 NPEPPSP55786 919 aa20.19■□□□□ 0.82
HMGN1-206ENST00000431390 GJC2Q5T442 439 aaPredicted RBP20.19■□□□□ 0.82
HMGN1-206ENST00000431390 KLHL10Q6JEL2 608 aa20.19■□□□□ 0.82
HMGN1-206ENST00000431390 DHTKD1Q96HY7 919 aaPredicted RBP20.19■□□□□ 0.82
HMGN1-206ENST00000431390 CEP170P1Q96L14 293 aa20.19■□□□□ 0.82
HMGN1-206ENST00000431390 NIFKQ9BYG3 293 aaKnown RBP20.19■□□□□ 0.82
HMGN1-206ENST00000431390 SMARCAD1Q9H4L7 1026 aa20.19■□□□□ 0.82
HMGN1-206ENST00000431390 PARVGQ9HBI0 331 aa20.19■□□□□ 0.82
HMGN1-206ENST00000431390 OLFML3Q9NRN5 406 aa20.19■□□□□ 0.82
HMGN1-206ENST00000431390 NRBP2Q9NSY0 501 aa20.19■□□□□ 0.82
HMGN1-206ENST00000431390 PPME1Q9Y570 386 aa20.19■□□□□ 0.82
HMGN1-206ENST00000431390 TMEM150BA6NC51 233 aa20.18■□□□□ 0.82
HMGN1-206ENST00000431390 RSPH10B2B2RC85 870 aa20.18■□□□□ 0.82
HMGN1-206ENST00000431390 SOX1O00570 391 aaPredicted RBP20.18■□□□□ 0.82
HMGN1-206ENST00000431390 USO1O60763 962 aaKnown RBP20.18■□□□□ 0.82
HMGN1-206ENST00000431390 RSPH10BP0C881 870 aa20.18■□□□□ 0.82
HMGN1-206ENST00000431390 PRAMEF19Q5SWL8 479 aa20.18■□□□□ 0.82
HMGN1-206ENST00000431390 MFSD14CQ5VZR4 134 aa20.18■□□□□ 0.82
HMGN1-206ENST00000431390 GUF1Q8N442 669 aaKnown RBP20.18■□□□□ 0.82
HMGN1-206ENST00000431390 DIS3LQ8TF46 1054 aaKnown RBP20.18■□□□□ 0.82
HMGN1-206ENST00000431390 HPS3Q969F9 1004 aa20.18■□□□□ 0.82
HMGN1-206ENST00000431390 PAWRQ96IZ0 340 aaKnown RBP20.18■□□□□ 0.82
HMGN1-206ENST00000431390 ZHX3Q9H4I2 956 aa20.18■□□□□ 0.82
HMGN1-206ENST00000431390 CYP26B1Q9NR63 512 aa20.18■□□□□ 0.82
HMGN1-206ENST00000431390 CTNND2Q9UQB3 1225 aa20.18■□□□□ 0.82
HMGN1-206ENST00000431390 GNEQ9Y223 722 aaKnown RBP20.18■□□□□ 0.82
HMGN1-206ENST00000431390 HIP1RO75146 1068 aa20.17■□□□□ 0.82
HMGN1-206ENST00000431390 DGAT1O75907 488 aa20.17■□□□□ 0.82
HMGN1-206ENST00000431390 KIF20AO95235 890 aa20.17■□□□□ 0.82
HMGN1-206ENST00000431390 HOXD8P13378 290 aaPredicted RBP20.17■□□□□ 0.82
HMGN1-206ENST00000431390 MAPK7Q13164 816 aa20.17■□□□□ 0.82
HMGN1-206ENST00000431390 SFR1Q86XK3 245 aa20.17■□□□□ 0.82
HMGN1-206ENST00000431390 OR6J1Q8NGC5 347 aa20.17■□□□□ 0.82
HMGN1-206ENST00000431390 NELFBQ8WX92 580 aa20.17■□□□□ 0.82
HMGN1-206ENST00000431390 BBXQ8WY36 941 aaPredicted RBP20.17■□□□□ 0.82
HMGN1-206ENST00000431390 ANP32BQ92688 251 aaKnown RBP20.17■□□□□ 0.82
HMGN1-206ENST00000431390 GLG1Q92896 1179 aa20.17■□□□□ 0.82
HMGN1-206ENST00000431390 MED15Q96RN5 788 aa20.17■□□□□ 0.82
HMGN1-206ENST00000431390 CRISPLD2Q9H0B8 497 aa20.17■□□□□ 0.82
HMGN1-206ENST00000431390 Q9Y3F1 56 aa20.17■□□□□ 0.82
HMGN1-206ENST00000431390 A0A1W2PPC1 479 aa20.17■□□□□ 0.82
HMGN1-206ENST00000431390 PPFIA4O75335 1185 aa20.17■□□□□ 0.82
HMGN1-206ENST00000431390 SPATA1Q5VX52 437 aa20.17■□□□□ 0.82
HMGN1-206ENST00000431390 TRMT1LQ7Z2T5 733 aaKnown RBP20.17■□□□□ 0.82
HMGN1-206ENST00000431390 AFG1LQ8WV93 481 aa20.17■□□□□ 0.82
HMGN1-206ENST00000431390 TRIB2Q92519 343 aa20.17■□□□□ 0.82
HMGN1-206ENST00000431390 LRCH3Q96II8 777 aa20.17■□□□□ 0.82
HMGN1-206ENST00000431390 DRC1Q96MC2 740 aa20.17■□□□□ 0.82
HMGN1-206ENST00000431390 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.17■□□□□ 0.824e-10■■■■□ 24
HMGN1-206ENST00000431390 FAM184BQ9ULE4 1060 aa20.17■□□□□ 0.82
HMGN1-206ENST00000431390 MAPK8IP1Q9UQF2 711 aa20.17■□□□□ 0.82
HMGN1-206ENST00000431390 ADCY6O43306 1168 aa20.16■□□□□ 0.82
HMGN1-206ENST00000431390 CCNE1P24864 410 aa20.16■□□□□ 0.82
HMGN1-206ENST00000431390 MYOCDQ8IZQ8 938 aa20.16■□□□□ 0.82
HMGN1-206ENST00000431390 DAW1Q8N136 415 aa20.16■□□□□ 0.82
HMGN1-206ENST00000431390 MYCT1Q8N699 235 aa20.16■□□□□ 0.82
HMGN1-206ENST00000431390 MCPH1Q8NEM0 835 aa20.16■□□□□ 0.82
HMGN1-206ENST00000431390 ATP8B4Q8TF62 1192 aa20.16■□□□□ 0.82
HMGN1-206ENST00000431390 SH2D3AQ9BRG2 576 aa20.16■□□□□ 0.82
HMGN1-206ENST00000431390 PDLIM7Q9NR12 457 aa20.16■□□□□ 0.82
HMGN1-206ENST00000431390 NFE2L3Q9Y4A8 694 aa20.16■□□□□ 0.82
HMGN1-206ENST00000431390 BICDL2A1A5D9 508 aa20.15■□□□□ 0.82
HMGN1-206ENST00000431390 LGALS2P05162 132 aa20.15■□□□□ 0.82
HMGN1-206ENST00000431390 CAPN2P17655 700 aa20.15■□□□□ 0.82
HMGN1-206ENST00000431390 PTGS1P23219 599 aa20.15■□□□□ 0.82
HMGN1-206ENST00000431390 TARBP2Q15633 366 aaKnown RBP20.15■□□□□ 0.82
HMGN1-206ENST00000431390 MTERF2Q49AM1 385 aa20.15■□□□□ 0.82
HMGN1-206ENST00000431390 FOXR2Q6PJQ5 311 aa20.15■□□□□ 0.82
HMGN1-206ENST00000431390 ATP6V0A4Q9HBG4 840 aa20.15■□□□□ 0.82
HMGN1-206ENST00000431390 ERAP1Q9NZ08 941 aa20.15■□□□□ 0.82
HMGN1-206ENST00000431390 TBC1D7Q9P0N9 293 aa20.15■□□□□ 0.82
HMGN1-206ENST00000431390 LARSQ9P2J5 1176 aaKnown RBP20.15■□□□□ 0.82
HMGN1-206ENST00000431390 MMP3P08254 477 aa20.14■□□□□ 0.81
HMGN1-206ENST00000431390 MAPTP10636 758 aaKnown RBP20.14■□□□□ 0.81
HMGN1-206ENST00000431390 CYBAP13498 195 aa20.14■□□□□ 0.81
HMGN1-206ENST00000431390 AKR1A1P14550 325 aa20.14■□□□□ 0.81
HMGN1-206ENST00000431390 DEKP35659 375 aaKnown RBP20.14■□□□□ 0.81
HMGN1-206ENST00000431390 RFC5P40937 340 aa20.14■□□□□ 0.81
HMGN1-206ENST00000431390 STX17P56962 302 aa20.14■□□□□ 0.81
HMGN1-206ENST00000431390 CENPPQ6IPU0 288 aa20.14■□□□□ 0.81
HMGN1-206ENST00000431390 SARM1Q6SZW1 724 aa20.14■□□□□ 0.81
HMGN1-206ENST00000431390 NECAB2Q7Z6G3 386 aa20.14■□□□□ 0.81
HMGN1-206ENST00000431390 TLK2Q86UE8 772 aa20.14■□□□□ 0.81
HMGN1-206ENST00000431390 TRIM50Q86XT4 487 aa20.14■□□□□ 0.81
HMGN1-206ENST00000431390 SLC17A8Q8NDX2 589 aa20.14■□□□□ 0.81
HMGN1-206ENST00000431390 KIFAP3Q92845 792 aa20.14■□□□□ 0.81
HMGN1-206ENST00000431390 P2RX5Q93086 422 aa20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms