RNA–Protein interactions for RNA: ENST00000429921.5

RPE-206, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

TSL 1 (best) BASIC

Gene RPE, Length 2,511 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-206ENST00000429921 TRAF3IP3Q9Y228 551 aa11.11□□□□□ -0.63
RPE-206ENST00000429921 A0A1W2PQJ5 194 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 CCDC169A6NNP5 214 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 PDXKO00764 312 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 IPO7O95373 1038 aaKnown RBP11.1□□□□□ -0.63
RPE-206ENST00000429921 AFPP02771 609 aaKnown RBP11.1□□□□□ -0.63
RPE-206ENST00000429921 YBX3P16989 372 aaKnown RBP eCLIP11.1□□□□□ -0.63
RPE-206ENST00000429921 QARSP47897 775 aaKnown RBP11.1□□□□□ -0.63
RPE-206ENST00000429921 RARRES1P49788 294 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 SP2Q02086 613 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 SFMBT2Q5VUG0 894 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 SWSAP1Q6NVH7 229 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 CATSPERGQ6ZRH7 1159 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 CCDC125Q86Z20 511 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 FAM186BQ8IYM0 893 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 GPC2Q8N158 579 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 PLEKHA4Q9H4M7 779 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 ST7Q9NRC1 585 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 ADAMTS1Q9UHI8 967 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 AFG3L2Q9Y4W6 797 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 SNCAIPQ9Y6H5 919 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 MYH11P35749 1972 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 SPDYE16A6NNV3 312 aaPredicted RBP11.1□□□□□ -0.63
RPE-206ENST00000429921 EIF3CLB5ME19 914 aaKnown RBP11.1□□□□□ -0.63
RPE-206ENST00000429921 KIF20AO95235 890 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 PON1P27169 355 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 MAGEA1P43355 309 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 KRT83P78385 493 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 MKRN3Q13064 507 aaKnown RBP11.1□□□□□ -0.63
RPE-206ENST00000429921 EDRF1Q3B7T1 1238 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 CBWD6Q4V339 395 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 CBWD3Q5JTY5 395 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 CBWD5Q5RIA9 395 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 NOA1Q8NC60 698 aaKnown RBP11.1□□□□□ -0.63
RPE-206ENST00000429921 EIF3CQ99613 913 aaKnown RBP11.1□□□□□ -0.63
RPE-206ENST00000429921 CBWD1Q9BRT8 395 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 GOLPH3Q9H4A6 298 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 HAUS4Q9H6D7 363 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 BTBD7Q9P203 1132 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 CGNQ9P2M7 1197 aaKnown RBP11.1□□□□□ -0.63
RPE-206ENST00000429921 CDC23Q9UJX2 597 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 FRMPD4Q14CM0 1322 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 LTBP3Q9NS15 1303 aa11.1□□□□□ -0.63
RPE-206ENST00000429921 A0A087X0T9 212 aa11.09□□□□□ -0.63
RPE-206ENST00000429921 TMCO5BA8MYB1 307 aa11.09□□□□□ -0.63
RPE-206ENST00000429921 FAM228BP0C875 321 aa11.09□□□□□ -0.63
RPE-206ENST00000429921 EPB41P11171 864 aaKnown RBP11.09□□□□□ -0.63
RPE-206ENST00000429921 CHMP4BP1P59074 171 aa11.09□□□□□ -0.63
RPE-206ENST00000429921 KIF5AQ12840 1032 aa11.09□□□□□ -0.63
RPE-206ENST00000429921 EXOC3L4Q17RC7 722 aa11.09□□□□□ -0.63
RPE-206ENST00000429921 RBM46Q8TBY0 533 aaKnown RBP11.09□□□□□ -0.63
RPE-206ENST00000429921 ZNF526Q8TF50 670 aaPredicted RBP11.09□□□□□ -0.63
RPE-206ENST00000429921 SLC35C1Q96A29 364 aa11.09□□□□□ -0.63
RPE-206ENST00000429921 CCDC94Q9BW85 323 aaPredicted RBP11.09□□□□□ -0.63
RPE-206ENST00000429921 GANQ9H2C0 597 aa11.09□□□□□ -0.63
RPE-206ENST00000429921 AGPAT3Q9NRZ7 376 aa11.09□□□□□ -0.63
RPE-206ENST00000429921 GCNT4Q9P109 453 aa11.09□□□□□ -0.63
RPE-206ENST00000429921 MYO6Q9UM54 1294 aa11.09□□□□□ -0.63
RPE-206ENST00000429921 PACSIN2Q9UNF0 486 aaPredicted RBP11.09□□□□□ -0.63
RPE-206ENST00000429921 DOCK1Q14185 1865 aa11.09□□□□□ -0.63
RPE-206ENST00000429921 IRF6O14896 467 aa11.09□□□□□ -0.63
RPE-206ENST00000429921 ZNF862O60290 1169 aa11.09□□□□□ -0.63
RPE-206ENST00000429921 EXOC3O60645 756 aa11.09□□□□□ -0.63
RPE-206ENST00000429921 ZMYND10O75800 440 aa11.09□□□□□ -0.63
RPE-206ENST00000429921 GAP43P17677 238 aa11.09□□□□□ -0.63
RPE-206ENST00000429921 RNASE9P60153 205 aaKnown RBP11.09□□□□□ -0.63
RPE-206ENST00000429921 ARHGAP44Q17R89 818 aa11.09□□□□□ -0.63
RPE-206ENST00000429921 FIGNQ5HY92 759 aa11.09□□□□□ -0.63
RPE-206ENST00000429921 ANO5Q75V66 913 aa11.09□□□□□ -0.63
RPE-206ENST00000429921 NLRX1Q86UT6 975 aa11.09□□□□□ -0.63
RPE-206ENST00000429921 VSIG10LQ86VR7 867 aa11.09□□□□□ -0.63
RPE-206ENST00000429921 ANKRD35Q8N283 1001 aa11.09□□□□□ -0.63
RPE-206ENST00000429921 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.09□□□□□ -0.63
RPE-206ENST00000429921 SAAL1Q96ER3 474 aa11.09□□□□□ -0.63
RPE-206ENST00000429921 MMS19Q96T76 1030 aa11.09□□□□□ -0.63
RPE-206ENST00000429921 POP1Q99575 1024 aaKnown RBP11.09□□□□□ -0.63
RPE-206ENST00000429921 PARD6BQ9BYG5 372 aa11.09□□□□□ -0.63
RPE-206ENST00000429921 CYP39A1Q9NYL5 469 aa11.09□□□□□ -0.63
RPE-206ENST00000429921 CEP72Q9P209 647 aa11.09□□□□□ -0.63
RPE-206ENST00000429921 MYH10P35580 1976 aa11.09□□□□□ -0.63
RPE-206ENST00000429921 KRT86O43790 486 aa11.08□□□□□ -0.64
RPE-206ENST00000429921 GFPT2O94808 682 aa11.08□□□□□ -0.64
RPE-206ENST00000429921 GNA14O95837 355 aa11.08□□□□□ -0.64
RPE-206ENST00000429921 TUBB4AP04350 444 aa11.08□□□□□ -0.64
RPE-206ENST00000429921 MATR3P43243 847 aaKnown RBP eCLIP11.08□□□□□ -0.641e-9■■■■□ 22.9
RPE-206ENST00000429921 VAV2P52735 878 aa11.08□□□□□ -0.64
RPE-206ENST00000429921 KLHL30Q0D2K2 578 aa11.08□□□□□ -0.64
RPE-206ENST00000429921 EAPPQ56P03 285 aaPredicted RBP11.08□□□□□ -0.64
RPE-206ENST00000429921 WDR78Q5VTH9 848 aa11.08□□□□□ -0.64
RPE-206ENST00000429921 DPY19L2P1Q6NXN4 242 aa11.08□□□□□ -0.64
RPE-206ENST00000429921 CYFIP1Q7L576 1253 aa11.08□□□□□ -0.64
RPE-206ENST00000429921 NCAPG2Q86XI2 1143 aa11.08□□□□□ -0.64
RPE-206ENST00000429921 BSNDQ8WZ55 320 aa11.08□□□□□ -0.64
RPE-206ENST00000429921 SPAG5Q96R06 1193 aa11.08□□□□□ -0.64
RPE-206ENST00000429921 OLFML3Q9NRN5 406 aa11.08□□□□□ -0.64
RPE-206ENST00000429921 EFCAB8A8MWE9 144 aa11.08□□□□□ -0.64
RPE-206ENST00000429921 ANKRD63C9JTQ0 380 aa11.08□□□□□ -0.64
RPE-206ENST00000429921 PGK2P07205 417 aa11.08□□□□□ -0.64
RPE-206ENST00000429921 UCHL3P15374 230 aa11.08□□□□□ -0.64
RPE-206ENST00000429921 CCND2P30279 289 aa11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms