RNA–Protein interactions for RNA: ENST00000429713.6

SYNPO2-202, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 9,920 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-202ENST00000429713 ARMT1Q9H993 441 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 SERTAD1Q9UHV2 236 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 TLDC2A0PJX2 215 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 TRAF5O00463 557 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 ANP32DO95626 131 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 PCP11498 1178 aaKnown RBP8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 ATICP31939 592 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 CTDSPL2Q05D32 466 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 IL17REQ8NFR9 667 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 HPS3Q969F9 1004 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 CLIC6Q96NY7 704 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 SH3GL2Q99962 352 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 SLC38A10Q9HBR0 1119 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 ETNK1Q9HBU6 452 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 SAMM50Q9Y512 469 aa8.07□□□□□ -1.12
SYNPO2-202ENST00000429713 BAIAP3O94812 1187 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 ASIC2Q16515 512 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 TRIM16LQ309B1 348 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 KIAA1841Q6NSI8 718 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 NDEL1Q9GZM8 345 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 KCNF1Q9H3M0 494 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 TRAF3IP3Q9Y228 551 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 SPEF2Q9C093 1822 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 USP6P35125 1406 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 RGPD2P0DJD1 1756 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 SLC26A4O43511 780 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 MCF2P10911 925 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 RAPGEF1Q13905 1077 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 LETM2Q2VYF4 491 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 AKNAD1Q5T1N1 836 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 UPF3AQ9H1J1 476 aaKnown RBP8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 EFR3BQ9Y2G0 817 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 ARIH1Q9Y4X5 557 aaPredicted RBP8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 ORC6Q9Y5N6 252 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 KIF13AQ9H1H9 1805 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 LRRC31Q6UY01 552 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 KIAA0825Q8IV33 1275 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 C16orf96A6NNT2 1141 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 N4BP1O75113 896 aaKnown RBP8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 TNFAIP8O95379 198 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 CHRNA2Q15822 529 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 ZCWPW2Q504Y3 356 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 E4F1Q66K89 784 aaPredicted RBP8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 RFWD2Q8NHY2 731 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 RHOBTB2Q9BYZ6 727 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 ANLNQ9NQW6 1124 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 SAR1AQ9NR31 198 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 ARID1AO14497 2285 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 SOWAHDA6NJG2 315 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 SPDYE3A6NKU9 549 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 TOM1O60784 492 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 LDHCP07864 332 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 KRT7P08729 469 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 EEF1DP29692 281 aaKnown RBP8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 OCRLQ01968 901 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 PDAP1Q13442 181 aaKnown RBP8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 TSGA10IPQ3SY00 556 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 ZFP1Q6P2D0 407 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 DHX40Q8IX18 779 aaKnown RBP8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 NSUN7Q8NE18 718 aaKnown RBP8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 V9GY48 417 aaPredicted RBP8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 SAGE2PA6NJ88 616 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 CDH16O75309 829 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 TSPAN9O75954 239 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 NQO1P15559 274 aaKnown RBP8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 PDIA5Q14554 519 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 ATXN2LQ8WWM7 1075 aaKnown RBP8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 EMC3Q9P0I2 261 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 RESTQ13127 1097 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 PDCLQ13371 301 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 BRIP1Q9BX63 1249 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 RNPEPL1Q9HAU8 725 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 STMN3Q9NZ72 180 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 PFASO15067 1338 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 KRIT1O00522 736 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 GYG2O15488 501 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 MAGEA1P43355 309 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 GUCY2DQ02846 1103 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 RBL2Q08999 1139 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 CNBD1Q8NA66 436 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 EFHD2Q96C19 240 aaPredicted RBP8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 ZMYND12Q9H0C1 365 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 RIC8AQ9NPQ8 531 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 DIP2BQ9P265 1576 aa8.06□□□□□ -1.12
SYNPO2-202ENST00000429713 KRT37O76014 449 aa8.05□□□□□ -1.12
SYNPO2-202ENST00000429713 HLA-DOAP06340 250 aa8.05□□□□□ -1.12
SYNPO2-202ENST00000429713 SCG2P13521 617 aa8.05□□□□□ -1.12
SYNPO2-202ENST00000429713 MYBPC2Q14324 1141 aa8.05□□□□□ -1.12
SYNPO2-202ENST00000429713 CALCRLQ16602 461 aa8.05□□□□□ -1.12
SYNPO2-202ENST00000429713 SEC16BQ96JE7 1060 aa8.05□□□□□ -1.12
SYNPO2-202ENST00000429713 RXFP1Q9HBX9 757 aa8.05□□□□□ -1.12
SYNPO2-202ENST00000429713 ADGRG1Q9Y653 693 aa8.05□□□□□ -1.12
SYNPO2-202ENST00000429713 GTPBP6O43824 516 aaPredicted RBP8.05□□□□□ -1.12
SYNPO2-202ENST00000429713 PPP6R3Q5H9R7 873 aaPredicted RBP8.05□□□□□ -1.12
SYNPO2-202ENST00000429713 FSCBQ5H9T9 825 aa8.05□□□□□ -1.12
SYNPO2-202ENST00000429713 B3GNT6Q6ZMB0 384 aa8.05□□□□□ -1.12
SYNPO2-202ENST00000429713 PPP4R3CPQ6ZMV5 832 aa8.05□□□□□ -1.12
SYNPO2-202ENST00000429713 PROM2Q8N271 834 aa8.05□□□□□ -1.12
SYNPO2-202ENST00000429713 RBM41Q96IZ5 413 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms