RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 SAMD3Q8N6K7 520 aa17.78■□□□□ 0.44
MBD4-203ENST00000429544 TRPM4Q8TD43 1214 aa17.78■□□□□ 0.44
MBD4-203ENST00000429544 BORCS6Q96GS4 357 aa17.78■□□□□ 0.44
MBD4-203ENST00000429544 PDCD2LQ9BRP1 358 aa17.78■□□□□ 0.44
MBD4-203ENST00000429544 ARFGAP3Q9NP61 516 aa17.78■□□□□ 0.44
MBD4-203ENST00000429544 GCNT4Q9P109 453 aa17.78■□□□□ 0.44
MBD4-203ENST00000429544 SALL4Q9UJQ4 1053 aa17.78■□□□□ 0.44
MBD4-203ENST00000429544 RIPK3Q9Y572 518 aa17.78■□□□□ 0.44
MBD4-203ENST00000429544 ZNF185O15231 689 aa17.77■□□□□ 0.44
MBD4-203ENST00000429544 HMGCS2P54868 508 aa17.77■□□□□ 0.44
MBD4-203ENST00000429544 ARHGEF16Q5VV41 709 aa17.77■□□□□ 0.44
MBD4-203ENST00000429544 APOBEC3FQ8IUX4 373 aaKnown RBP17.77■□□□□ 0.44
MBD4-203ENST00000429544 SPAG5Q96R06 1193 aa17.77■□□□□ 0.44
MBD4-203ENST00000429544 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP17.77■□□□□ 0.44
MBD4-203ENST00000429544 GBP3Q9H0R5 595 aa17.77■□□□□ 0.44
MBD4-203ENST00000429544 AGPAT3Q9NRZ7 376 aa17.77■□□□□ 0.44
MBD4-203ENST00000429544 K7ENM7 598 aa17.77■□□□□ 0.43
MBD4-203ENST00000429544 QARSP47897 775 aaKnown RBP17.77■□□□□ 0.43
MBD4-203ENST00000429544 BRD3Q15059 726 aa17.77■□□□□ 0.43
MBD4-203ENST00000429544 UGCGQ16739 394 aa17.77■□□□□ 0.43
MBD4-203ENST00000429544 TXLNBQ8N3L3 684 aa17.77■□□□□ 0.43
MBD4-203ENST00000429544 CAGE1Q8TC20 777 aa17.77■□□□□ 0.43
MBD4-203ENST00000429544 ALS2CR12Q96Q35 445 aa17.77■□□□□ 0.43
MBD4-203ENST00000429544 TBC1D22BQ9NU19 505 aa17.77■□□□□ 0.43
MBD4-203ENST00000429544 JRKLQ9Y4A0 524 aa17.77■□□□□ 0.43
MBD4-203ENST00000429544 TESPA1A2RU30 521 aaPredicted RBP17.76■□□□□ 0.43
MBD4-203ENST00000429544 CCDC151A5D8V7 595 aa17.76■□□□□ 0.43
MBD4-203ENST00000429544 PPP1R12BO60237 982 aaPredicted RBP17.76■□□□□ 0.43
MBD4-203ENST00000429544 ATP9AO75110 1047 aa17.76■□□□□ 0.43
MBD4-203ENST00000429544 FDX1P10109 184 aa17.76■□□□□ 0.43
MBD4-203ENST00000429544 CKAP4Q07065 602 aaKnown RBP17.76■□□□□ 0.43
MBD4-203ENST00000429544 BAATQ14032 418 aaPredicted RBP17.76■□□□□ 0.43
MBD4-203ENST00000429544 SYCP3Q8IZU3 236 aa17.76■□□□□ 0.43
MBD4-203ENST00000429544 SH2D3AQ9BRG2 576 aa17.76■□□□□ 0.43
MBD4-203ENST00000429544 SIX2Q9NPC8 291 aa17.76■□□□□ 0.43
MBD4-203ENST00000429544 DBR1Q9UK59 544 aaKnown RBP17.76■□□□□ 0.43
MBD4-203ENST00000429544 AJAP1Q9UKB5 411 aaPredicted RBP17.76■□□□□ 0.43
MBD4-203ENST00000429544 PNMA2Q9UL42 364 aa17.76■□□□□ 0.43
MBD4-203ENST00000429544 TMEM150BA6NC51 233 aa17.76■□□□□ 0.43
MBD4-203ENST00000429544 TBC1D8O95759 1140 aa17.76■□□□□ 0.43
MBD4-203ENST00000429544 RARRES1P49788 294 aa17.76■□□□□ 0.43
MBD4-203ENST00000429544 SLC18A3Q16572 532 aa17.76■□□□□ 0.43
MBD4-203ENST00000429544 TRMT1LQ7Z2T5 733 aaKnown RBP17.76■□□□□ 0.43
MBD4-203ENST00000429544 CCDC43Q96MW1 224 aaKnown RBP17.76■□□□□ 0.43
MBD4-203ENST00000429544 SGIP1Q9BQI5 828 aa17.76■□□□□ 0.43
MBD4-203ENST00000429544 TCEAL9Q9UHQ7 104 aa17.76■□□□□ 0.43
MBD4-203ENST00000429544 RAB21Q9UL25 225 aa17.76■□□□□ 0.43
MBD4-203ENST00000429544 KIAA1217Q5T5P2 1943 aa17.76■□□□□ 0.43
MBD4-203ENST00000429544 A0A087X0T9 212 aa17.75■□□□□ 0.43
MBD4-203ENST00000429544 BUB1O43683 1085 aa17.75■□□□□ 0.43
MBD4-203ENST00000429544 PPP1R37O75864 691 aa17.75■□□□□ 0.43
MBD4-203ENST00000429544 FAM228BP0C875 321 aa17.75■□□□□ 0.43
MBD4-203ENST00000429544 SNRNP48Q6IEG0 339 aaKnown RBP17.75■□□□□ 0.43
MBD4-203ENST00000429544 NLGN2Q8NFZ4 835 aa17.75■□□□□ 0.43
MBD4-203ENST00000429544 MKNK1Q9BUB5 465 aa17.75■□□□□ 0.43
MBD4-203ENST00000429544 STRA6Q9BX79 667 aa17.75■□□□□ 0.43
MBD4-203ENST00000429544 DMAC2Q9NW81 257 aa17.75■□□□□ 0.43
MBD4-203ENST00000429544 RNF216Q9NWF9 866 aaPredicted RBP17.75■□□□□ 0.43
MBD4-203ENST00000429544 SNX12Q9UMY4 172 aa17.75■□□□□ 0.43
MBD4-203ENST00000429544 GJB7Q6PEY0 223 aa17.75■□□□□ 0.43
MBD4-203ENST00000429544 SMAP1Q8IYB5 467 aaPredicted RBP17.75■□□□□ 0.43
MBD4-203ENST00000429544 REPS2Q8NFH8 660 aa17.75■□□□□ 0.43
MBD4-203ENST00000429544 LUC7LQ9NQ29 371 aaKnown RBP17.75■□□□□ 0.43
MBD4-203ENST00000429544 GGA3Q9NZ52 723 aa17.75■□□□□ 0.43
MBD4-203ENST00000429544 ADAMTS1Q9UHI8 967 aa17.75■□□□□ 0.43
MBD4-203ENST00000429544 FRMD4BQ9Y2L6 1034 aa17.75■□□□□ 0.43
MBD4-203ENST00000429544 WDR81Q562E7 1941 aa17.75■□□□□ 0.43
MBD4-203ENST00000429544 SASH3O75995 380 aa17.74■□□□□ 0.43
MBD4-203ENST00000429544 YWHABP31946 246 aaKnown RBP17.74■□□□□ 0.43
MBD4-203ENST00000429544 PLA2G4AP47712 749 aa17.74■□□□□ 0.43
MBD4-203ENST00000429544 NAP1L1P55209 391 aaKnown RBP17.74■□□□□ 0.43
MBD4-203ENST00000429544 LONRF2Q1L5Z9 754 aa17.74■□□□□ 0.43
MBD4-203ENST00000429544 IRF2BP2Q7Z5L9 587 aa17.74■□□□□ 0.43
MBD4-203ENST00000429544 RBM46Q8TBY0 533 aaKnown RBP17.74■□□□□ 0.43
MBD4-203ENST00000429544 NOX5Q96PH1 765 aa17.74■□□□□ 0.43
MBD4-203ENST00000429544 LARSQ9P2J5 1176 aaKnown RBP17.74■□□□□ 0.43
MBD4-203ENST00000429544 GTPBP10A4D1E9 387 aaKnown RBP17.74■□□□□ 0.43
MBD4-203ENST00000429544 PDE2AO00408 941 aaPredicted RBP17.74■□□□□ 0.43
MBD4-203ENST00000429544 BACH1O14867 736 aa17.74■□□□□ 0.43
MBD4-203ENST00000429544 LYPLA2O95372 231 aa17.74■□□□□ 0.43
MBD4-203ENST00000429544 CCNE2O96020 404 aa17.74■□□□□ 0.43
MBD4-203ENST00000429544 TRIM49P0CI25 452 aa17.74■□□□□ 0.43
MBD4-203ENST00000429544 TRIM49CP0CI26 452 aa17.74■□□□□ 0.43
MBD4-203ENST00000429544 VSNL1P62760 191 aa17.74■□□□□ 0.43
MBD4-203ENST00000429544 PTK2Q05397 1052 aa17.74■□□□□ 0.43
MBD4-203ENST00000429544 ZNF571Q7Z3V5 609 aaPredicted RBP17.74■□□□□ 0.43
MBD4-203ENST00000429544 ST7Q9NRC1 585 aa17.74■□□□□ 0.43
MBD4-203ENST00000429544 DOCK5Q9H7D0 1870 aa17.74■□□□□ 0.43
MBD4-203ENST00000429544 ATP8B1O43520 1251 aa17.73■□□□□ 0.43
MBD4-203ENST00000429544 NCK2O43639 380 aa17.73■□□□□ 0.43
MBD4-203ENST00000429544 CCND2P30279 289 aa17.73■□□□□ 0.43
MBD4-203ENST00000429544 DSG3P32926 999 aa17.73■□□□□ 0.43
MBD4-203ENST00000429544 FMO5P49326 533 aa17.73■□□□□ 0.43
MBD4-203ENST00000429544 JAK3P52333 1124 aa17.73■□□□□ 0.43
MBD4-203ENST00000429544 UTP14CQ5TAP6 766 aaKnown RBP17.73■□□□□ 0.43
MBD4-203ENST00000429544 IQCEQ6IPM2 695 aa17.73■□□□□ 0.43
MBD4-203ENST00000429544 NFRKBQ6P4R8 1299 aa17.73■□□□□ 0.43
MBD4-203ENST00000429544 CCDC125Q86Z20 511 aa17.73■□□□□ 0.43
MBD4-203ENST00000429544 GOLGA5Q8TBA6 731 aa17.73■□□□□ 0.43
MBD4-203ENST00000429544 C12orf42Q96LP6 360 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms