RNA–Protein interactions for RNA: ENST00000427455.1

HERPUD2-205, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 672 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-205ENST00000427455 POTEGQ6S5H5 508 aa28.08■■■□□ 2.09
HERPUD2-205ENST00000427455 ZNF710Q8N1W2 664 aa28.08■■■□□ 2.09
HERPUD2-205ENST00000427455 ZNF579Q8NAF0 562 aaKnown RBP28.08■■■□□ 2.09
HERPUD2-205ENST00000427455 DHX33Q9H6R0 707 aaKnown RBP28.08■■■□□ 2.09
HERPUD2-205ENST00000427455 CLIC4Q9Y696 253 aa28.08■■■□□ 2.09
HERPUD2-205ENST00000427455 SQORQ9Y6N5 450 aa28.08■■■□□ 2.09
HERPUD2-205ENST00000427455 ZBBXA8MT70 800 aa28.07■■■□□ 2.08
HERPUD2-205ENST00000427455 F13A1P00488 732 aa28.07■■■□□ 2.08
HERPUD2-205ENST00000427455 VTNP04004 478 aa28.07■■■□□ 2.08
HERPUD2-205ENST00000427455 XRCC6P12956 609 aaKnown RBP eCLIP28.07■■■□□ 2.08
HERPUD2-205ENST00000427455 DNM2P50570 870 aa28.07■■■□□ 2.08
HERPUD2-205ENST00000427455 PKP1Q13835 747 aa28.07■■■□□ 2.08
HERPUD2-205ENST00000427455 LPIN1Q14693 890 aa28.07■■■□□ 2.08
HERPUD2-205ENST00000427455 PIGOQ8TEQ8 1089 aa28.07■■■□□ 2.08
HERPUD2-205ENST00000427455 SEPT8Q92599 483 aa28.07■■■□□ 2.08
HERPUD2-205ENST00000427455 NACC1Q96RE7 527 aa28.07■■■□□ 2.08
HERPUD2-205ENST00000427455 OSBPL7Q9BZF2 842 aa28.07■■■□□ 2.08
HERPUD2-205ENST00000427455 CXXC1Q9P0U4 656 aaPredicted RBP28.07■■■□□ 2.08
HERPUD2-205ENST00000427455 PP2D1A8MPX8 630 aa28.06■■■□□ 2.08
HERPUD2-205ENST00000427455 RARRES1P49788 294 aa28.06■■■□□ 2.08
HERPUD2-205ENST00000427455 PTPAQ15257 358 aa28.06■■■□□ 2.08
HERPUD2-205ENST00000427455 FOXD4L5Q5VV16 416 aaPredicted RBP28.06■■■□□ 2.08
HERPUD2-205ENST00000427455 TSHZ1Q6ZSZ6 1077 aa28.06■■■□□ 2.08
HERPUD2-205ENST00000427455 USP38Q8NB14 1042 aa28.06■■■□□ 2.08
HERPUD2-205ENST00000427455 DBF4BQ8NFT6 615 aa28.06■■■□□ 2.08
HERPUD2-205ENST00000427455 FOXD4L4Q8WXT5 416 aaPredicted RBP28.06■■■□□ 2.08
HERPUD2-205ENST00000427455 APBB2Q92870 758 aa28.06■■■□□ 2.08
HERPUD2-205ENST00000427455 AK8Q96MA6 479 aa28.06■■■□□ 2.08
HERPUD2-205ENST00000427455 IFIH1Q9BYX4 1025 aaKnown RBP28.06■■■□□ 2.08
HERPUD2-205ENST00000427455 GAS2O43903 313 aaKnown RBP28.05■■■□□ 2.08
HERPUD2-205ENST00000427455 EFCAB14O75071 495 aa28.05■■■□□ 2.08
HERPUD2-205ENST00000427455 LAMA2P24043 3122 aaKnown RBP28.05■■■□□ 2.08
HERPUD2-205ENST00000427455 MKRN4PQ13434 485 aaPredicted RBP28.05■■■□□ 2.08
HERPUD2-205ENST00000427455 EMC2Q15006 297 aa28.05■■■□□ 2.08
HERPUD2-205ENST00000427455 KIZQ2M2Z5 673 aa28.05■■■□□ 2.08
HERPUD2-205ENST00000427455 USP28Q96RU2 1077 aa28.05■■■□□ 2.08
HERPUD2-205ENST00000427455 DBR1Q9UK59 544 aaKnown RBP28.05■■■□□ 2.08
HERPUD2-205ENST00000427455 GINS2Q9Y248 185 aa28.05■■■□□ 2.08
HERPUD2-205ENST00000427455 ABHD14A-ACY1A0A1B0GW23 586 aa28.04■■■□□ 2.08
HERPUD2-205ENST00000427455 GPR32O75388 356 aa28.04■■■□□ 2.08
HERPUD2-205ENST00000427455 DRP2Q13474 957 aa28.04■■■□□ 2.08
HERPUD2-205ENST00000427455 IKBKEQ14164 716 aa28.04■■■□□ 2.08
HERPUD2-205ENST00000427455 TCTN1Q2MV58 587 aa28.04■■■□□ 2.08
HERPUD2-205ENST00000427455 ZNF396Q96N95 335 aaPredicted RBP28.04■■■□□ 2.08
HERPUD2-205ENST00000427455 PPP1R16BQ96T49 567 aa28.04■■■□□ 2.08
HERPUD2-205ENST00000427455 SLC4A7Q9Y6M7 1214 aa28.04■■■□□ 2.08
HERPUD2-205ENST00000427455 MORC2Q9Y6X9 1032 aaPredicted RBP28.04■■■□□ 2.08
HERPUD2-205ENST00000427455 LOXHD1Q8IVV2 1947 aa28.03■■■□□ 2.08
HERPUD2-205ENST00000427455 DGAT1O75907 488 aa28.03■■■□□ 2.08
HERPUD2-205ENST00000427455 CDC25AP30304 524 aa28.03■■■□□ 2.08
HERPUD2-205ENST00000427455 CRYBB1P53674 252 aaPredicted RBP28.03■■■□□ 2.08
HERPUD2-205ENST00000427455 NLRP11P59045 1033 aaKnown RBP28.03■■■□□ 2.08
HERPUD2-205ENST00000427455 CEBPZQ03701 1054 aaKnown RBP28.03■■■□□ 2.08
HERPUD2-205ENST00000427455 ECM1Q16610 540 aa28.03■■■□□ 2.08
HERPUD2-205ENST00000427455 MTRQ99707 1265 aa28.03■■■□□ 2.08
HERPUD2-205ENST00000427455 MMTAG2Q9BU76 263 aaKnown RBP28.03■■■□□ 2.08
HERPUD2-205ENST00000427455 SUCLA2Q9P2R7 463 aaPredicted RBP28.03■■■□□ 2.08
HERPUD2-205ENST00000427455 KIAA1024Q9UPX6 916 aa28.03■■■□□ 2.08
HERPUD2-205ENST00000427455 MICAL3Q7RTP6 2002 aa28.02■■■□□ 2.08
HERPUD2-205ENST00000427455 LONP1P36776 959 aaKnown RBP28.02■■■□□ 2.08
HERPUD2-205ENST00000427455 KCNJ6P48051 423 aa28.02■■■□□ 2.08
HERPUD2-205ENST00000427455 NASPP49321 788 aaPredicted RBP28.02■■■□□ 2.08
HERPUD2-205ENST00000427455 GPC3P51654 580 aa28.02■■■□□ 2.08
HERPUD2-205ENST00000427455 CDC42EP1Q00587 391 aa28.02■■■□□ 2.08
HERPUD2-205ENST00000427455 TCP11Q8WWU5 503 aa28.02■■■□□ 2.08
HERPUD2-205ENST00000427455 OSMRQ99650 979 aa28.02■■■□□ 2.08
HERPUD2-205ENST00000427455 ADAMTS10Q9H324 1103 aa28.02■■■□□ 2.08
HERPUD2-205ENST00000427455 ATP6V0A4Q9HBG4 840 aa28.02■■■□□ 2.08
HERPUD2-205ENST00000427455 BMP2KQ9NSY1 1161 aaPredicted RBP28.02■■■□□ 2.08
HERPUD2-205ENST00000427455 DDX19AQ9NUU7 478 aaKnown RBP28.02■■■□□ 2.08
HERPUD2-205ENST00000427455 A0A087WWV3 80 aa28.01■■■□□ 2.07
HERPUD2-205ENST00000427455 SOX1O00570 391 aaPredicted RBP28.01■■■□□ 2.07
HERPUD2-205ENST00000427455 CD52P31358 61 aa28.01■■■□□ 2.07
HERPUD2-205ENST00000427455 FXR1P51114 621 aaKnown RBP eCLIP28.01■■■□□ 2.07
HERPUD2-205ENST00000427455 WDR5P61964 334 aaKnown RBP28.01■■■□□ 2.07
HERPUD2-205ENST00000427455 SMAD3P84022 425 aaKnown RBP28.01■■■□□ 2.07
HERPUD2-205ENST00000427455 PAK2Q13177 524 aa28.01■■■□□ 2.07
HERPUD2-205ENST00000427455 TMEM40Q8WWA1 233 aa28.01■■■□□ 2.07
HERPUD2-205ENST00000427455 PSPC1Q8WXF1 523 aaKnown RBP28.01■■■□□ 2.07
HERPUD2-205ENST00000427455 SCLT1Q96NL6 688 aa28.01■■■□□ 2.07
HERPUD2-205ENST00000427455 SLC9A7Q96T83 725 aa28.01■■■□□ 2.07
HERPUD2-205ENST00000427455 AGO3Q9H9G7 860 aaKnown RBP28.01■■■□□ 2.07
HERPUD2-205ENST00000427455 CDHR5Q9HBB8 845 aa28.01■■■□□ 2.07
HERPUD2-205ENST00000427455 HSFX4A0A1B0GTS1 333 aaPredicted RBP28■■■□□ 2.07
HERPUD2-205ENST00000427455 HSFX3A0A1B0GWH4 333 aaPredicted RBP28■■■□□ 2.07
HERPUD2-205ENST00000427455 ARHGEF35A5YM69 484 aa28■■■□□ 2.07
HERPUD2-205ENST00000427455 RBAK-RBAKDNI3L0D1 243 aa28■■■□□ 2.07
HERPUD2-205ENST00000427455 SLC26A4O43511 780 aa28■■■□□ 2.07
HERPUD2-205ENST00000427455 BRD1O95696 1058 aa28■■■□□ 2.07
HERPUD2-205ENST00000427455 MARCKSP29966 332 aaPredicted RBP28■■■□□ 2.07
HERPUD2-205ENST00000427455 SLC39A14Q15043 492 aa28■■■□□ 2.07
HERPUD2-205ENST00000427455 HYIQ5T013 277 aa28■■■□□ 2.07
HERPUD2-205ENST00000427455 RHPN2Q8IUC4 686 aa28■■■□□ 2.07
HERPUD2-205ENST00000427455 NLRP7Q8WX94 980 aa28■■■□□ 2.07
HERPUD2-205ENST00000427455 TMEM143Q96AN5 459 aa28■■■□□ 2.07
HERPUD2-205ENST00000427455 XPNPEP1Q9NQW7 623 aa28■■■□□ 2.07
HERPUD2-205ENST00000427455 FBXO2Q9UK22 296 aaPredicted RBP28■■■□□ 2.07
HERPUD2-205ENST00000427455 SRPRBQ9Y5M8 271 aaKnown RBP28■■■□□ 2.07
HERPUD2-205ENST00000427455 USO1O60763 962 aaKnown RBP27.99■■■□□ 2.07
HERPUD2-205ENST00000427455 RPS6KA5O75582 802 aa27.99■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms