RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 BMP1P13497 986 aa11.45□□□□□ -0.58
COMMD1-202ENST00000427417 IBSPP21815 317 aaPredicted RBP11.45□□□□□ -0.58
COMMD1-202ENST00000427417 CTNNB1P35222 781 aa11.45□□□□□ -0.58
COMMD1-202ENST00000427417 KRT2P35908 639 aa11.45□□□□□ -0.58
COMMD1-202ENST00000427417 SARSP49591 514 aaKnown RBP11.45□□□□□ -0.58
COMMD1-202ENST00000427417 CLCN3P51790 818 aa11.45□□□□□ -0.58
COMMD1-202ENST00000427417 CDC42EP1Q00587 391 aa11.45□□□□□ -0.58
COMMD1-202ENST00000427417 TBC1D8BQ0IIM8 1120 aa11.45□□□□□ -0.58
COMMD1-202ENST00000427417 TRIM29Q14134 588 aa11.45□□□□□ -0.58
COMMD1-202ENST00000427417 ME3Q16798 604 aa11.45□□□□□ -0.58
COMMD1-202ENST00000427417 KIZQ2M2Z5 673 aa11.45□□□□□ -0.58
COMMD1-202ENST00000427417 XKR3Q5GH77 459 aa11.45□□□□□ -0.58
COMMD1-202ENST00000427417 B3GNT9Q6UX72 402 aa11.45□□□□□ -0.58
COMMD1-202ENST00000427417 PIK3AP1Q6ZUJ8 805 aa11.45□□□□□ -0.58
COMMD1-202ENST00000427417 CMTR2Q8IYT2 770 aaKnown RBP11.45□□□□□ -0.58
COMMD1-202ENST00000427417 NECAB1Q8N987 351 aa11.45□□□□□ -0.58
COMMD1-202ENST00000427417 CLP1Q92989 425 aaKnown RBP11.45□□□□□ -0.58
COMMD1-202ENST00000427417 ZNF689Q96CS4 500 aaPredicted RBP11.45□□□□□ -0.58
COMMD1-202ENST00000427417 PPP1R16BQ96T49 567 aa11.45□□□□□ -0.58
COMMD1-202ENST00000427417 OSMRQ99650 979 aa11.45□□□□□ -0.58
COMMD1-202ENST00000427417 C11orf84Q9BUA3 381 aaPredicted RBP11.45□□□□□ -0.58
COMMD1-202ENST00000427417 PLVAPQ9BX97 442 aa11.45□□□□□ -0.58
COMMD1-202ENST00000427417 RC3H2Q9HBD1 1191 aaKnown RBP11.45□□□□□ -0.58
COMMD1-202ENST00000427417 ERVK-5Q9HDB9 667 aa11.45□□□□□ -0.58
COMMD1-202ENST00000427417 SEPT9Q9UHD8 586 aaPredicted RBP11.45□□□□□ -0.58
COMMD1-202ENST00000427417 ST3GAL5Q9UNP4 418 aa11.45□□□□□ -0.58
COMMD1-202ENST00000427417 NOC2LQ9Y3T9 749 aaKnown RBP11.45□□□□□ -0.58
COMMD1-202ENST00000427417 PCDHB7Q9Y5E2 793 aa11.45□□□□□ -0.58
COMMD1-202ENST00000427417 ATG2AQ2TAZ0 1938 aa11.45□□□□□ -0.58
COMMD1-202ENST00000427417 TTC3P53804 2025 aa11.44□□□□□ -0.58
COMMD1-202ENST00000427417 SLC37A4O43826 429 aa11.44□□□□□ -0.58
COMMD1-202ENST00000427417 GPR32O75388 356 aa11.44□□□□□ -0.58
COMMD1-202ENST00000427417 BAG4O95429 457 aaKnown RBP11.44□□□□□ -0.58
COMMD1-202ENST00000427417 BMPR1AP36894 532 aa11.44□□□□□ -0.58
COMMD1-202ENST00000427417 DNM2P50570 870 aa11.44□□□□□ -0.58
COMMD1-202ENST00000427417 NLRP11P59045 1033 aaKnown RBP11.44□□□□□ -0.58
COMMD1-202ENST00000427417 PSMC5P62195 406 aa11.44□□□□□ -0.58
COMMD1-202ENST00000427417 PPP2R5CQ13362 524 aa11.44□□□□□ -0.58
COMMD1-202ENST00000427417 UGCGQ16739 394 aa11.44□□□□□ -0.58
COMMD1-202ENST00000427417 TMEM266Q2M3C6 531 aa11.44□□□□□ -0.58
COMMD1-202ENST00000427417 SLC24A5Q71RS6 500 aa11.44□□□□□ -0.58
COMMD1-202ENST00000427417 RTN4RL1Q86UN2 441 aaPredicted RBP11.44□□□□□ -0.58
COMMD1-202ENST00000427417 SLFN12Q8IYM2 578 aa11.44□□□□□ -0.58
COMMD1-202ENST00000427417 LRRC71Q8N4P6 559 aa11.44□□□□□ -0.58
COMMD1-202ENST00000427417 LINC01465Q8N7H1 131 aa11.44□□□□□ -0.58
COMMD1-202ENST00000427417 NSUN7Q8NE18 718 aaKnown RBP11.44□□□□□ -0.58
COMMD1-202ENST00000427417 GJA10Q969M2 543 aa11.44□□□□□ -0.58
COMMD1-202ENST00000427417 SCLT1Q96NL6 688 aa11.44□□□□□ -0.58
COMMD1-202ENST00000427417 JPH2Q9BR39 696 aaPredicted RBP11.44□□□□□ -0.58
COMMD1-202ENST00000427417 NIFKQ9BYG3 293 aaKnown RBP11.44□□□□□ -0.58
COMMD1-202ENST00000427417 LMAN2LQ9H0V9 348 aa11.44□□□□□ -0.58
COMMD1-202ENST00000427417 TMX1Q9H3N1 280 aa11.44□□□□□ -0.58
COMMD1-202ENST00000427417 CDHR5Q9HBB8 845 aa11.44□□□□□ -0.58
COMMD1-202ENST00000427417 KCNMB3Q9NPA1 279 aa11.44□□□□□ -0.58
COMMD1-202ENST00000427417 RGS18Q9NS28 235 aa11.44□□□□□ -0.58
COMMD1-202ENST00000427417 MYH9P35579 1960 aaKnown RBP11.44□□□□□ -0.58
COMMD1-202ENST00000427417 WDR81Q562E7 1941 aa11.44□□□□□ -0.58
COMMD1-202ENST00000427417 RALGAPA2Q2PPJ7 1873 aa11.43□□□□□ -0.58
COMMD1-202ENST00000427417 ZSCAN20P17040 1043 aaPredicted RBP11.43□□□□□ -0.58
COMMD1-202ENST00000427417 EIF4BP23588 611 aaKnown RBP11.43□□□□□ -0.58
COMMD1-202ENST00000427417 QARSP47897 775 aaKnown RBP11.43□□□□□ -0.58
COMMD1-202ENST00000427417 TARBP2Q15633 366 aaKnown RBP11.43□□□□□ -0.58
COMMD1-202ENST00000427417 MTERF2Q49AM1 385 aa11.43□□□□□ -0.58
COMMD1-202ENST00000427417 NAALADL2Q58DX5 795 aa11.43□□□□□ -0.58
COMMD1-202ENST00000427417 FAM228AQ86W67 206 aa11.43□□□□□ -0.58
COMMD1-202ENST00000427417 EXOC8Q8IYI6 725 aa11.43□□□□□ -0.58
COMMD1-202ENST00000427417 CRIPAKQ8N1N5 446 aa11.43□□□□□ -0.58
COMMD1-202ENST00000427417 BANK1Q8NDB2 785 aa11.43□□□□□ -0.58
COMMD1-202ENST00000427417 OXER1Q8TDS5 423 aa11.43□□□□□ -0.58
COMMD1-202ENST00000427417 TMEM40Q8WWA1 233 aa11.43□□□□□ -0.58
COMMD1-202ENST00000427417 P2RX5Q93086 422 aa11.43□□□□□ -0.58
COMMD1-202ENST00000427417 ADAM2Q99965 735 aa11.43□□□□□ -0.58
COMMD1-202ENST00000427417 NSUN3Q9H649 340 aaKnown RBP11.43□□□□□ -0.58
COMMD1-202ENST00000427417 GJB4Q9NTQ9 266 aa11.43□□□□□ -0.58
COMMD1-202ENST00000427417 NCOR1O75376 2440 aa11.43□□□□□ -0.58
COMMD1-202ENST00000427417 KIAA1671Q9BY89 1806 aa11.42□□□□□ -0.58
COMMD1-202ENST00000427417 DDX11L8A8MPP1 907 aa11.42□□□□□ -0.58
COMMD1-202ENST00000427417 NCK2O43639 380 aa11.42□□□□□ -0.58
COMMD1-202ENST00000427417 MGEA5O60502 916 aa11.42□□□□□ -0.58
COMMD1-202ENST00000427417 LARGE1O95461 756 aa11.42□□□□□ -0.58
COMMD1-202ENST00000427417 SEC24BO95487 1268 aa11.42□□□□□ -0.58
COMMD1-202ENST00000427417 MMP1P03956 469 aa11.42□□□□□ -0.58
COMMD1-202ENST00000427417 P4HBP07237 508 aaKnown RBP11.42□□□□□ -0.58
COMMD1-202ENST00000427417 LINC00271P0C7V0 271 aa11.42□□□□□ -0.58
COMMD1-202ENST00000427417 FDPSP14324 419 aaKnown RBP11.42□□□□□ -0.58
COMMD1-202ENST00000427417 GATMP50440 423 aa11.42□□□□□ -0.58
COMMD1-202ENST00000427417 GPC3P51654 580 aa11.42□□□□□ -0.58
COMMD1-202ENST00000427417 PAN2Q504Q3 1202 aaKnown RBP11.42□□□□□ -0.58
COMMD1-202ENST00000427417 NLRP7Q8WX94 980 aa11.42□□□□□ -0.58
COMMD1-202ENST00000427417 ADAMTS10Q9H324 1103 aa11.42□□□□□ -0.58
COMMD1-202ENST00000427417 ELAC1Q9H777 363 aaKnown RBP11.42□□□□□ -0.58
COMMD1-202ENST00000427417 UBE2ZQ9H832 354 aaPredicted RBP11.42□□□□□ -0.58
COMMD1-202ENST00000427417 ATP6V0A4Q9HBG4 840 aa11.42□□□□□ -0.58
COMMD1-202ENST00000427417 AAASQ9NRG9 546 aa11.42□□□□□ -0.58
COMMD1-202ENST00000427417 TMEM161AQ9NX61 479 aa11.42□□□□□ -0.58
COMMD1-202ENST00000427417 VAV3Q9UKW4 847 aa11.42□□□□□ -0.58
COMMD1-202ENST00000427417 LIMCH1Q9UPQ0 1083 aa11.42□□□□□ -0.58
COMMD1-202ENST00000427417 PPME1Q9Y570 386 aa11.42□□□□□ -0.58
COMMD1-202ENST00000427417 MRPL42Q9Y6G3 142 aaKnown RBP11.42□□□□□ -0.58
COMMD1-202ENST00000427417 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms