RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 ZNF579Q8NAF0 562 aaKnown RBP15.3■□□□□ 0.04
SNX3-204ENST00000426155 MTMR9Q96QG7 549 aa15.3■□□□□ 0.04
SNX3-204ENST00000426155 CEP89Q96ST8 783 aa15.3■□□□□ 0.04
SNX3-204ENST00000426155 OSMRQ99650 979 aa15.3■□□□□ 0.04
SNX3-204ENST00000426155 LXNQ9BS40 222 aa15.3■□□□□ 0.04
SNX3-204ENST00000426155 ZBED2Q9BTP6 218 aa15.3■□□□□ 0.04
SNX3-204ENST00000426155 TTC12Q9H892 705 aaPredicted RBP15.3■□□□□ 0.04
SNX3-204ENST00000426155 SUGCTQ9HAC7 445 aa15.3■□□□□ 0.04
SNX3-204ENST00000426155 NRBP2Q9NSY0 501 aa15.3■□□□□ 0.04
SNX3-204ENST00000426155 BMP2KQ9NSY1 1161 aaPredicted RBP15.3■□□□□ 0.04
SNX3-204ENST00000426155 CEP131Q9UPN4 1083 aa15.3■□□□□ 0.04
SNX3-204ENST00000426155 AKT3Q9Y243 479 aa15.3■□□□□ 0.04
SNX3-204ENST00000426155 STXBP5LQ9Y2K9 1186 aa15.3■□□□□ 0.04
SNX3-204ENST00000426155 REV3LO60673 3130 aa15.3■□□□□ 0.04
SNX3-204ENST00000426155 KDM3AQ9Y4C1 1321 aa15.29■□□□□ 0.04
SNX3-204ENST00000426155 EPOPA6NHQ4 379 aa15.29■□□□□ 0.04
SNX3-204ENST00000426155 POTEMA6NI47 508 aa15.29■□□□□ 0.04
SNX3-204ENST00000426155 DDX11L8A8MPP1 907 aa15.29■□□□□ 0.04
SNX3-204ENST00000426155 EFCAB14O75071 495 aa15.29■□□□□ 0.04
SNX3-204ENST00000426155 UPP2O95045 317 aa15.29■□□□□ 0.04
SNX3-204ENST00000426155 BAG4O95429 457 aaKnown RBP15.29■□□□□ 0.04
SNX3-204ENST00000426155 AMHP03971 560 aa15.29■□□□□ 0.04
SNX3-204ENST00000426155 FOSL2P15408 326 aa15.29■□□□□ 0.04
SNX3-204ENST00000426155 QARSP47897 775 aaKnown RBP15.29■□□□□ 0.04
SNX3-204ENST00000426155 MCM2P49736 904 aa15.29■□□□□ 0.04
SNX3-204ENST00000426155 NPEPPSP55786 919 aa15.29■□□□□ 0.04
SNX3-204ENST00000426155 TBC1D8BQ0IIM8 1120 aa15.29■□□□□ 0.04
SNX3-204ENST00000426155 EPHA7Q15375 998 aa15.29■□□□□ 0.04
SNX3-204ENST00000426155 TTC38Q5R3I4 469 aa15.29■□□□□ 0.04
SNX3-204ENST00000426155 APBB2Q92870 758 aa15.29■□□□□ 0.04
SNX3-204ENST00000426155 PADI3Q9ULW8 664 aa15.29■□□□□ 0.04
SNX3-204ENST00000426155 PCDHA12Q9UN75 941 aa15.29■□□□□ 0.04
SNX3-204ENST00000426155 NOC2LQ9Y3T9 749 aaKnown RBP15.29■□□□□ 0.04
SNX3-204ENST00000426155 TTC3P53804 2025 aa15.29■□□□□ 0.04
SNX3-204ENST00000426155 RFXAPO00287 272 aa15.28■□□□□ 0.04
SNX3-204ENST00000426155 ZBTB39O15060 712 aa15.28■□□□□ 0.04
SNX3-204ENST00000426155 GPR32O75388 356 aa15.28■□□□□ 0.04
SNX3-204ENST00000426155 RPLP2P05387 115 aaKnown RBP15.28■□□□□ 0.04
SNX3-204ENST00000426155 P4HBP07237 508 aaKnown RBP15.28■□□□□ 0.04
SNX3-204ENST00000426155 TOB1P50616 345 aaPredicted RBP15.28■□□□□ 0.04
SNX3-204ENST00000426155 TAP1Q03518 808 aa15.28■□□□□ 0.04
SNX3-204ENST00000426155 PAK2Q13177 524 aa15.28■□□□□ 0.04
SNX3-204ENST00000426155 NME8Q8N427 588 aa15.28■□□□□ 0.04
SNX3-204ENST00000426155 NIFKQ9BYG3 293 aaKnown RBP15.28■□□□□ 0.04
SNX3-204ENST00000426155 TMX1Q9H3N1 280 aa15.28■□□□□ 0.04
SNX3-204ENST00000426155 SMC3Q9UQE7 1217 aa15.28■□□□□ 0.04
SNX3-204ENST00000426155 RALGAPA2Q2PPJ7 1873 aa15.28■□□□□ 0.04
SNX3-204ENST00000426155 PRUNE2Q8WUY3 3088 aa15.28■□□□□ 0.04
SNX3-204ENST00000426155 ATG2AQ2TAZ0 1938 aa15.27■□□□□ 0.04
SNX3-204ENST00000426155 A0A087WWV3 80 aa15.27■□□□□ 0.04
SNX3-204ENST00000426155 MAGEB2O15479 319 aa15.27■□□□□ 0.04
SNX3-204ENST00000426155 MGEA5O60502 916 aa15.27■□□□□ 0.04
SNX3-204ENST00000426155 IBSPP21815 317 aaPredicted RBP15.27■□□□□ 0.04
SNX3-204ENST00000426155 U2AF2P26368 475 aaKnown RBP eCLIP15.27■□□□□ 0.04
SNX3-204ENST00000426155 NLRP11P59045 1033 aaKnown RBP15.27■□□□□ 0.04
SNX3-204ENST00000426155 NFX1Q12986 1120 aaKnown RBP15.27■□□□□ 0.04
SNX3-204ENST00000426155 ADGRE1Q14246 886 aa15.27■□□□□ 0.04
SNX3-204ENST00000426155 MCTP1Q6DN14 999 aa15.27■□□□□ 0.04
SNX3-204ENST00000426155 RTN4RL1Q86UN2 441 aaPredicted RBP15.27■□□□□ 0.04
SNX3-204ENST00000426155 FAM228AQ86W67 206 aa15.27■□□□□ 0.04
SNX3-204ENST00000426155 TPH2Q8IWU9 490 aa15.27■□□□□ 0.04
SNX3-204ENST00000426155 EIF2AK1Q9BQI3 630 aaKnown RBP15.27■□□□□ 0.04
SNX3-204ENST00000426155 ERVK-5Q9HDB9 667 aa15.27■□□□□ 0.04
SNX3-204ENST00000426155 MTUS1Q9ULD2 1270 aa15.27■□□□□ 0.04
SNX3-204ENST00000426155 FNDC1Q4ZHG4 1894 aaPredicted RBP15.27■□□□□ 0.03
SNX3-204ENST00000426155 UNC80Q8N2C7 3258 aa15.26■□□□□ 0.03
SNX3-204ENST00000426155 IGKV6-21A0A0C4DH24 114 aa15.26■□□□□ 0.03
SNX3-204ENST00000426155 LINC01553A4QN01 128 aa15.26■□□□□ 0.03
SNX3-204ENST00000426155 ENPP3O14638 875 aa15.26■□□□□ 0.03
SNX3-204ENST00000426155 RPS6KA5O75582 802 aa15.26■□□□□ 0.03
SNX3-204ENST00000426155 SLITRK3O94933 977 aa15.26■□□□□ 0.03
SNX3-204ENST00000426155 OR52Z1P0C646 297 aa15.26■□□□□ 0.03
SNX3-204ENST00000426155 YWHABP31946 246 aaKnown RBP15.26■□□□□ 0.03
SNX3-204ENST00000426155 GPC3P51654 580 aa15.26■□□□□ 0.03
SNX3-204ENST00000426155 HTRA4P83105 476 aaPredicted RBP15.26■□□□□ 0.03
SNX3-204ENST00000426155 IL27Q8NEV9 243 aa15.26■□□□□ 0.03
SNX3-204ENST00000426155 ARNTL2Q8WYA1 636 aa15.26■□□□□ 0.03
SNX3-204ENST00000426155 TOP1MTQ969P6 601 aa15.26■□□□□ 0.03
SNX3-204ENST00000426155 MAP7D2Q96T17 732 aa15.26■□□□□ 0.03
SNX3-204ENST00000426155 RAD9AQ99638 391 aa15.26■□□□□ 0.03
SNX3-204ENST00000426155 ADAMTS10Q9H324 1103 aa15.26■□□□□ 0.03
SNX3-204ENST00000426155 CYP26B1Q9NR63 512 aa15.26■□□□□ 0.03
SNX3-204ENST00000426155 NOL7Q9UMY1 257 aaKnown RBP15.26■□□□□ 0.03
SNX3-204ENST00000426155 KIF3AQ9Y496 699 aa15.26■□□□□ 0.03
SNX3-204ENST00000426155 PCDHB6Q9Y5E3 794 aa15.26■□□□□ 0.03
SNX3-204ENST00000426155 H3BQV1 296 aa15.25■□□□□ 0.03
SNX3-204ENST00000426155 MAFO75444 373 aaPredicted RBP15.25■□□□□ 0.03
SNX3-204ENST00000426155 CSDE1O75534 798 aaKnown RBP15.25■□□□□ 0.03
SNX3-204ENST00000426155 FGFR4P22455 802 aa15.25■□□□□ 0.03
SNX3-204ENST00000426155 TMOD1P28289 359 aa15.25■□□□□ 0.03
SNX3-204ENST00000426155 TECP42680 631 aa15.25■□□□□ 0.03
SNX3-204ENST00000426155 CRYBB1P53674 252 aaPredicted RBP15.25■□□□□ 0.03
SNX3-204ENST00000426155 CUL4AQ13619 759 aa15.25■□□□□ 0.03
SNX3-204ENST00000426155 KSR1Q8IVT5 923 aa15.25■□□□□ 0.03
SNX3-204ENST00000426155 C4orf19Q8IY42 314 aa15.25■□□□□ 0.03
SNX3-204ENST00000426155 C4orf32Q8N8J7 132 aa15.25■□□□□ 0.03
SNX3-204ENST00000426155 USP38Q8NB14 1042 aa15.25■□□□□ 0.03
SNX3-204ENST00000426155 CEP170P1Q96L14 293 aa15.25■□□□□ 0.03
SNX3-204ENST00000426155 HSD17B14Q9BPX1 270 aa15.25■□□□□ 0.03
SNX3-204ENST00000426155 ZSWIM4Q9H7M6 989 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms