RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 HOXD13P35453 343 aa18.15■□□□□ 0.5
CMTM3-202ENST00000424011 PSMC5P62195 406 aa18.15■□□□□ 0.5
CMTM3-202ENST00000424011 PWP2Q15269 919 aaKnown RBP18.15■□□□□ 0.5
CMTM3-202ENST00000424011 NFIL3Q16649 462 aa18.15■□□□□ 0.5
CMTM3-202ENST00000424011 ODR4Q5SWX8 454 aa18.15■□□□□ 0.5
CMTM3-202ENST00000424011 ZNF746Q6NUN9 644 aaPredicted RBP18.15■□□□□ 0.5
CMTM3-202ENST00000424011 PADI6Q6TGC4 694 aa18.15■□□□□ 0.5
CMTM3-202ENST00000424011 TMCO3Q6UWJ1 677 aa18.15■□□□□ 0.5
CMTM3-202ENST00000424011 ANKRD13AQ8IZ07 590 aa18.15■□□□□ 0.5
CMTM3-202ENST00000424011 SENP7Q9BQF6 1050 aa18.15■□□□□ 0.5
CMTM3-202ENST00000424011 NUCKS1Q9H1E3 243 aaKnown RBP18.15■□□□□ 0.5
CMTM3-202ENST00000424011 FAM207AQ9NSI2 230 aaPredicted RBP18.15■□□□□ 0.5
CMTM3-202ENST00000424011 ARGLU1Q9NWB6 273 aaPredicted RBP18.15■□□□□ 0.5
CMTM3-202ENST00000424011 ARMCX3Q9UH62 379 aaPredicted RBP18.15■□□□□ 0.5
CMTM3-202ENST00000424011 SFI1A8K8P3 1242 aa18.15■□□□□ 0.5
CMTM3-202ENST00000424011 POTEJP0CG39 1038 aa18.15■□□□□ 0.5
CMTM3-202ENST00000424011 GYS2P54840 703 aa18.15■□□□□ 0.5
CMTM3-202ENST00000424011 PPATQ06203 517 aa18.15■□□□□ 0.5
CMTM3-202ENST00000424011 ALCAMQ13740 583 aa18.15■□□□□ 0.5
CMTM3-202ENST00000424011 ZNF720Q7Z2F6 126 aa18.15■□□□□ 0.5
CMTM3-202ENST00000424011 SRLQ86TD4 932 aa18.15■□□□□ 0.5
CMTM3-202ENST00000424011 GOLGA5Q8TBA6 731 aa18.15■□□□□ 0.5
CMTM3-202ENST00000424011 MYCBPQ99417 103 aaPredicted RBP18.15■□□□□ 0.5
CMTM3-202ENST00000424011 EPC1Q9H2F5 836 aa18.15■□□□□ 0.5
CMTM3-202ENST00000424011 NHEJ1Q9H9Q4 299 aaPredicted RBP18.15■□□□□ 0.5
CMTM3-202ENST00000424011 A1CFQ9NQ94 594 aaKnown RBP18.15■□□□□ 0.5
CMTM3-202ENST00000424011 LARSQ9P2J5 1176 aaKnown RBP18.15■□□□□ 0.5
CMTM3-202ENST00000424011 FBXO40Q9UH90 709 aa18.15■□□□□ 0.5
CMTM3-202ENST00000424011 TFR2Q9UP52 801 aa18.15■□□□□ 0.5
CMTM3-202ENST00000424011 PLAGL2Q9UPG8 496 aa18.15■□□□□ 0.5
CMTM3-202ENST00000424011 ATP8B1O43520 1251 aa18.14■□□□□ 0.49
CMTM3-202ENST00000424011 DKC1O60832 514 aaKnown RBP eCLIP18.14■□□□□ 0.491e-9■■■□□ 17.2
CMTM3-202ENST00000424011 NR3C1P04150 777 aa18.14■□□□□ 0.49
CMTM3-202ENST00000424011 MAPTP10636 758 aaKnown RBP18.14■□□□□ 0.49
CMTM3-202ENST00000424011 EPB41P11171 864 aaKnown RBP18.14■□□□□ 0.49
CMTM3-202ENST00000424011 GNPTABQ3T906 1256 aa18.14■□□□□ 0.49
CMTM3-202ENST00000424011 MOB2Q70IA6 237 aa18.14■□□□□ 0.49
CMTM3-202ENST00000424011 PROCA1Q8NCQ7 364 aaPredicted RBP18.14■□□□□ 0.49
CMTM3-202ENST00000424011 IWS1Q96ST2 819 aa18.14■□□□□ 0.49
CMTM3-202ENST00000424011 NCAPGQ9BPX3 1015 aa18.14■□□□□ 0.49
CMTM3-202ENST00000424011 MYO1AQ9UBC5 1043 aa18.14■□□□□ 0.49
CMTM3-202ENST00000424011 CLEC11AQ9Y240 323 aa18.14■□□□□ 0.49
CMTM3-202ENST00000424011 RLFQ13129 1914 aa18.14■□□□□ 0.49
CMTM3-202ENST00000424011 ASTN1O14525 1302 aa18.14■□□□□ 0.49
CMTM3-202ENST00000424011 CTAGE9A4FU28 777 aa18.14■□□□□ 0.49
CMTM3-202ENST00000424011 HIP1RO75146 1068 aa18.14■□□□□ 0.49
CMTM3-202ENST00000424011 YWHABP31946 246 aaKnown RBP18.14■□□□□ 0.49
CMTM3-202ENST00000424011 RARRES1P49788 294 aa18.14■□□□□ 0.49
CMTM3-202ENST00000424011 RSRC2Q7L4I2 434 aaKnown RBP18.14■□□□□ 0.49
CMTM3-202ENST00000424011 HS2ST1Q7LGA3 356 aa18.14■□□□□ 0.49
CMTM3-202ENST00000424011 GOLGA6L1Q8N7Z2 621 aa18.14■□□□□ 0.49
CMTM3-202ENST00000424011 CNKSR2Q8WXI2 1034 aa18.14■□□□□ 0.49
CMTM3-202ENST00000424011 PURBQ96QR8 312 aaKnown RBP18.14■□□□□ 0.49
CMTM3-202ENST00000424011 CDC23Q9UJX2 597 aa18.14■□□□□ 0.49
CMTM3-202ENST00000424011 GUCA1BQ9UMX6 200 aa18.14■□□□□ 0.49
CMTM3-202ENST00000424011 ATP9AO75110 1047 aa18.13■□□□□ 0.49
CMTM3-202ENST00000424011 TTLL12Q14166 644 aaPredicted RBP18.13■□□□□ 0.49
CMTM3-202ENST00000424011 LBX2Q6XYB7 198 aa18.13■□□□□ 0.49
CMTM3-202ENST00000424011 CACNA2D4Q7Z3S7 1137 aa18.13■□□□□ 0.49
CMTM3-202ENST00000424011 ERO1BQ86YB8 467 aa18.13■□□□□ 0.49
CMTM3-202ENST00000424011 CCDC155Q8N6L0 562 aa18.13■□□□□ 0.49
CMTM3-202ENST00000424011 DNERQ8NFT8 737 aa18.13■□□□□ 0.49
CMTM3-202ENST00000424011 ANKEF1Q9NU02 776 aa18.13■□□□□ 0.49
CMTM3-202ENST00000424011 PFASO15067 1338 aa18.13■□□□□ 0.49
CMTM3-202ENST00000424011 LOXHD1Q8IVV2 1947 aa18.12■□□□□ 0.49
CMTM3-202ENST00000424011 CXCL11O14625 94 aa18.12■□□□□ 0.49
CMTM3-202ENST00000424011 CLGNO14967 610 aa18.12■□□□□ 0.49
CMTM3-202ENST00000424011 XRCC5P13010 732 aaKnown RBP18.12■□□□□ 0.49
CMTM3-202ENST00000424011 NMT1P30419 496 aaKnown RBP18.12■□□□□ 0.49
CMTM3-202ENST00000424011 NAPGQ99747 312 aaPredicted RBP18.12■□□□□ 0.49
CMTM3-202ENST00000424011 MOV10L1Q9BXT6 1211 aaKnown RBP18.12■□□□□ 0.49
CMTM3-202ENST00000424011 HAUS4Q9H6D7 363 aa18.12■□□□□ 0.49
CMTM3-202ENST00000424011 ELP3Q9H9T3 547 aa18.12■□□□□ 0.49
CMTM3-202ENST00000424011 PCDHA10Q9Y5I2 948 aa18.12■□□□□ 0.49
CMTM3-202ENST00000424011 NFASCO94856 1347 aa18.12■□□□□ 0.49
CMTM3-202ENST00000424011 PAPPA2Q9BXP8 1791 aa18.12■□□□□ 0.49
CMTM3-202ENST00000424011 KCNH2Q12809 1159 aa18.12■□□□□ 0.49
CMTM3-202ENST00000424011 MAP1SQ66K74 1059 aaPredicted RBP18.12■□□□□ 0.49
CMTM3-202ENST00000424011 SLC17A8Q8NDX2 589 aa18.12■□□□□ 0.49
CMTM3-202ENST00000424011 CLMNQ96JQ2 1002 aa18.12■□□□□ 0.49
CMTM3-202ENST00000424011 DRC1Q96MC2 740 aa18.12■□□□□ 0.49
CMTM3-202ENST00000424011 FIZ1Q96SL8 496 aa18.12■□□□□ 0.49
CMTM3-202ENST00000424011 RRAGCQ9HB90 399 aa18.12■□□□□ 0.49
CMTM3-202ENST00000424011 CEP72Q9P209 647 aa18.12■□□□□ 0.49
CMTM3-202ENST00000424011 A0A0G2JLL6 359 aaPredicted RBP18.11■□□□□ 0.49
CMTM3-202ENST00000424011 EIF3CLB5ME19 914 aaKnown RBP18.11■□□□□ 0.49
CMTM3-202ENST00000424011 TGFB1I1O43294 461 aa18.11■□□□□ 0.49
CMTM3-202ENST00000424011 CCNE2O96020 404 aa18.11■□□□□ 0.49
CMTM3-202ENST00000424011 PLEKP08567 350 aaPredicted RBP18.11■□□□□ 0.49
CMTM3-202ENST00000424011 KCNMA1Q12791 1236 aa18.11■□□□□ 0.49
CMTM3-202ENST00000424011 TREML2Q5T2D2 321 aa18.11■□□□□ 0.49
CMTM3-202ENST00000424011 ZNF662Q6ZS27 426 aa18.11■□□□□ 0.49
CMTM3-202ENST00000424011 ARMC9Q7Z3E5 817 aa18.11■□□□□ 0.49
CMTM3-202ENST00000424011 PRRT2Q7Z6L0 340 aaPredicted RBP18.11■□□□□ 0.49
CMTM3-202ENST00000424011 SMCR8Q8TEV9 937 aaPredicted RBP18.11■□□□□ 0.49
CMTM3-202ENST00000424011 CCDC42Q96M95 316 aa18.11■□□□□ 0.49
CMTM3-202ENST00000424011 EIF3CQ99613 913 aaKnown RBP18.11■□□□□ 0.49
CMTM3-202ENST00000424011 MKNK1Q9BUB5 465 aa18.11■□□□□ 0.49
CMTM3-202ENST00000424011 GBP3Q9H0R5 595 aa18.11■□□□□ 0.49
CMTM3-202ENST00000424011 POLD4Q9HCU8 107 aa18.11■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms