RNA–Protein interactions for RNA: ENST00000423653.5

CCDC78-203, Transcript of coiled-coil domain containing 78, humanhuman

APPRIS ALT2 TSL 3

Gene CCDC78, Length 621 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-203ENST00000423653 TCEAL5Q5H9L2 206 aa18.92■□□□□ 0.62
CCDC78-203ENST00000423653 RTN4RL1Q86UN2 441 aaPredicted RBP18.92■□□□□ 0.62
CCDC78-203ENST00000423653 CRIPAKQ8N1N5 446 aa18.92■□□□□ 0.62
CCDC78-203ENST00000423653 TMEM40Q8WWA1 233 aa18.92■□□□□ 0.62
CCDC78-203ENST00000423653 WASF1Q92558 559 aa18.92■□□□□ 0.62
CCDC78-203ENST00000423653 P2RX5Q93086 422 aa18.92■□□□□ 0.62
CCDC78-203ENST00000423653 AIFM3Q96NN9 605 aa18.92■□□□□ 0.62
CCDC78-203ENST00000423653 ADAM2Q99965 735 aa18.92■□□□□ 0.62
CCDC78-203ENST00000423653 PHF20Q9BVI0 1012 aa18.92■□□□□ 0.62
CCDC78-203ENST00000423653 DDX25Q9UHL0 483 aaKnown RBP18.92■□□□□ 0.62
CCDC78-203ENST00000423653 ST3GAL5Q9UNP4 418 aa18.92■□□□□ 0.62
CCDC78-203ENST00000423653 PCDHB7Q9Y5E2 793 aa18.92■□□□□ 0.62
CCDC78-203ENST00000423653 MRPL42Q9Y6G3 142 aaKnown RBP18.92■□□□□ 0.62
CCDC78-203ENST00000423653 BRWD1Q9NSI6 2320 aa18.92■□□□□ 0.62
CCDC78-203ENST00000423653 KIAA1671Q9BY89 1806 aa18.92■□□□□ 0.62
CCDC78-203ENST00000423653 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.91■□□□□ 0.62
CCDC78-203ENST00000423653 NCK2O43639 380 aa18.91■□□□□ 0.62
CCDC78-203ENST00000423653 EDIL3O43854 480 aa18.91■□□□□ 0.62
CCDC78-203ENST00000423653 ZNF862O60290 1169 aa18.91■□□□□ 0.62
CCDC78-203ENST00000423653 GPR32O75388 356 aa18.91■□□□□ 0.62
CCDC78-203ENST00000423653 MMP1P03956 469 aa18.91■□□□□ 0.62
CCDC78-203ENST00000423653 GCFC2P16383 781 aaKnown RBP18.91■□□□□ 0.62
CCDC78-203ENST00000423653 UGCGQ16739 394 aa18.91■□□□□ 0.62
CCDC78-203ENST00000423653 INF2Q27J81 1249 aa18.91■□□□□ 0.62
CCDC78-203ENST00000423653 PUS10Q3MIT2 529 aaKnown RBP18.91■□□□□ 0.62
CCDC78-203ENST00000423653 EFCAB12Q6NXP0 572 aa18.91■□□□□ 0.62
CCDC78-203ENST00000423653 SLC24A5Q71RS6 500 aa18.91■□□□□ 0.62
CCDC78-203ENST00000423653 ETNPPLQ8TBG4 499 aa18.91■□□□□ 0.62
CCDC78-203ENST00000423653 MBOAT7Q96N66 472 aa18.91■□□□□ 0.62
CCDC78-203ENST00000423653 SCLT1Q96NL6 688 aa18.91■□□□□ 0.62
CCDC78-203ENST00000423653 NAP1L4Q99733 375 aaKnown RBP18.91■□□□□ 0.62
CCDC78-203ENST00000423653 TPCN1Q9ULQ1 816 aa18.91■□□□□ 0.62
CCDC78-203ENST00000423653 ATG2AQ2TAZ0 1938 aa18.9■□□□□ 0.62
CCDC78-203ENST00000423653 MGEA5O60502 916 aa18.9■□□□□ 0.62
CCDC78-203ENST00000423653 IBSPP21815 317 aaPredicted RBP18.9■□□□□ 0.62
CCDC78-203ENST00000423653 LETM2Q2VYF4 491 aa18.9■□□□□ 0.62
CCDC78-203ENST00000423653 FAM228AQ86W67 206 aa18.9■□□□□ 0.62
CCDC78-203ENST00000423653 LRRC71Q8N4P6 559 aa18.9■□□□□ 0.62
CCDC78-203ENST00000423653 LINC01465Q8N7H1 131 aa18.9■□□□□ 0.62
CCDC78-203ENST00000423653 PPP2R3CQ969Q6 453 aa18.9■□□□□ 0.62
CCDC78-203ENST00000423653 PABPC5Q96DU9 382 aaKnown RBP18.9■□□□□ 0.62
CCDC78-203ENST00000423653 CDHR5Q9HBB8 845 aa18.9■□□□□ 0.62
CCDC78-203ENST00000423653 RGS18Q9NS28 235 aa18.9■□□□□ 0.62
CCDC78-203ENST00000423653 SEPT9Q9UHD8 586 aaPredicted RBP18.9■□□□□ 0.62
CCDC78-203ENST00000423653 KCNJ14Q9UNX9 436 aa18.9■□□□□ 0.62
CCDC78-203ENST00000423653 FAM50BQ9Y247 325 aa18.9■□□□□ 0.62
CCDC78-203ENST00000423653 GRM6O15303 877 aa18.89■□□□□ 0.61
CCDC78-203ENST00000423653 NLRP11P59045 1033 aaKnown RBP18.89■□□□□ 0.61
CCDC78-203ENST00000423653 XKR3Q5GH77 459 aa18.89■□□□□ 0.61
CCDC78-203ENST00000423653 NEK8Q86SG6 692 aa18.89■□□□□ 0.61
CCDC78-203ENST00000423653 GJA10Q969M2 543 aa18.89■□□□□ 0.61
CCDC78-203ENST00000423653 BRMS1Q9HCU9 246 aa18.89■□□□□ 0.61
CCDC78-203ENST00000423653 ORC3Q9UBD5 711 aaPredicted RBP18.89■□□□□ 0.61
CCDC78-203ENST00000423653 C9IYK1 514 aa18.88■□□□□ 0.61
CCDC78-203ENST00000423653 HOXA2O43364 376 aa18.88■□□□□ 0.61
CCDC78-203ENST00000423653 EIF4BP23588 611 aaKnown RBP18.88■□□□□ 0.61
CCDC78-203ENST00000423653 AK2P54819 239 aa18.88■□□□□ 0.61
CCDC78-203ENST00000423653 COL19A1Q14993 1142 aa18.88■□□□□ 0.61
CCDC78-203ENST00000423653 B3GNT9Q6UX72 402 aa18.88■□□□□ 0.61
CCDC78-203ENST00000423653 EP400NLQ6ZTU2 488 aa18.88■□□□□ 0.61
CCDC78-203ENST00000423653 FAM20AQ96MK3 541 aa18.88■□□□□ 0.61
CCDC78-203ENST00000423653 ELAC1Q9H777 363 aaKnown RBP18.88■□□□□ 0.61
CCDC78-203ENST00000423653 AAASQ9NRG9 546 aa18.88■□□□□ 0.61
CCDC78-203ENST00000423653 TMEM161AQ9NX61 479 aa18.88■□□□□ 0.61
CCDC78-203ENST00000423653 SLC37A4O43826 429 aa18.87■□□□□ 0.61
CCDC78-203ENST00000423653 DKC1O60832 514 aaKnown RBP eCLIP18.87■□□□□ 0.61
CCDC78-203ENST00000423653 ZSCAN20P17040 1043 aaPredicted RBP18.87■□□□□ 0.61
CCDC78-203ENST00000423653 DNM2P50570 870 aa18.87■□□□□ 0.61
CCDC78-203ENST00000423653 GPC3P51654 580 aa18.87■□□□□ 0.61
CCDC78-203ENST00000423653 CDC42EP1Q00587 391 aa18.87■□□□□ 0.61
CCDC78-203ENST00000423653 MTERF2Q49AM1 385 aa18.87■□□□□ 0.61
CCDC78-203ENST00000423653 FNDC1Q4ZHG4 1894 aaPredicted RBP18.87■□□□□ 0.61
CCDC78-203ENST00000423653 SPOUT1Q5T280 376 aaKnown RBP18.87■□□□□ 0.61
CCDC78-203ENST00000423653 PPP4R3AQ6IN85 833 aa18.87■□□□□ 0.61
CCDC78-203ENST00000423653 PTCRAQ6ISU1 281 aaPredicted RBP18.87■□□□□ 0.61
CCDC78-203ENST00000423653 NEK9Q8TD19 979 aa18.87■□□□□ 0.61
CCDC78-203ENST00000423653 NIFKQ9BYG3 293 aaKnown RBP18.87■□□□□ 0.61
CCDC78-203ENST00000423653 ADAMTS10Q9H324 1103 aa18.87■□□□□ 0.61
CCDC78-203ENST00000423653 ATP6V0A4Q9HBG4 840 aa18.87■□□□□ 0.61
CCDC78-203ENST00000423653 CLDND1Q9NY35 253 aa18.87■□□□□ 0.61
CCDC78-203ENST00000423653 PLAGL2Q9UPG8 496 aa18.87■□□□□ 0.61
CCDC78-203ENST00000423653 PCDHB12Q9Y5F1 795 aa18.87■□□□□ 0.61
CCDC78-203ENST00000423653 BDP1A6H8Y1 2624 aa18.86■□□□□ 0.61
CCDC78-203ENST00000423653 TBKBP1A7MCY6 615 aa18.86■□□□□ 0.61
CCDC78-203ENST00000423653 TBX3O15119 743 aa18.86■□□□□ 0.61
CCDC78-203ENST00000423653 GATMP50440 423 aa18.86■□□□□ 0.61
CCDC78-203ENST00000423653 PSMC5P62195 406 aa18.86■□□□□ 0.61
CCDC78-203ENST00000423653 PPP2R5CQ13362 524 aa18.86■□□□□ 0.61
CCDC78-203ENST00000423653 TARBP2Q15633 366 aaKnown RBP18.86■□□□□ 0.61
CCDC78-203ENST00000423653 CSPP1Q1MSJ5 1256 aa18.86■□□□□ 0.61
CCDC78-203ENST00000423653 PIK3AP1Q6ZUJ8 805 aa18.86■□□□□ 0.61
CCDC78-203ENST00000423653 NLRP7Q8WX94 980 aa18.86■□□□□ 0.61
CCDC78-203ENST00000423653 JPH2Q9BR39 696 aaPredicted RBP18.86■□□□□ 0.61
CCDC78-203ENST00000423653 C1QTNF1Q9BXJ1 281 aa18.86■□□□□ 0.61
CCDC78-203ENST00000423653 ALG13Q9NP73 1137 aaKnown RBP18.86■□□□□ 0.61
CCDC78-203ENST00000423653 KCNMB3Q9NPA1 279 aa18.86■□□□□ 0.61
CCDC78-203ENST00000423653 H3BQ06 376 aaPredicted RBP18.85■□□□□ 0.61
CCDC78-203ENST00000423653 MARCH6O60337 910 aa18.85■□□□□ 0.61
CCDC78-203ENST00000423653 CCNT1O60563 726 aaKnown RBP18.85■□□□□ 0.61
CCDC78-203ENST00000423653 CSPG5O95196 566 aa18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms