RNA–Protein interactions for RNA: ENST00000421710.5

SNAPC3-203, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 5

Gene SNAPC3, Length 730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-203ENST00000421710 NEK9Q8TD19 979 aa28.09■■■□□ 2.09
SNAPC3-203ENST00000421710 MTMR9Q96QG7 549 aa28.09■■■□□ 2.09
SNAPC3-203ENST00000421710 ZSWIM4Q9H7M6 989 aa28.09■■■□□ 2.09
SNAPC3-203ENST00000421710 ZSCAN21Q9Y5A6 473 aaPredicted RBP28.09■■■□□ 2.09
SNAPC3-203ENST00000421710 CHD7Q9P2D1 2997 aa28.09■■■□□ 2.09
SNAPC3-203ENST00000421710 COL4A6Q14031 1691 aa28.08■■■□□ 2.09
SNAPC3-203ENST00000421710 LCHNA4D1U4 455 aa28.08■■■□□ 2.09
SNAPC3-203ENST00000421710 ENPP3O14638 875 aa28.08■■■□□ 2.09
SNAPC3-203ENST00000421710 GPR182O15218 404 aa28.08■■■□□ 2.09
SNAPC3-203ENST00000421710 UPP2O95045 317 aa28.08■■■□□ 2.09
SNAPC3-203ENST00000421710 TXKP42681 527 aa28.08■■■□□ 2.09
SNAPC3-203ENST00000421710 ANO5Q75V66 913 aa28.08■■■□□ 2.09
SNAPC3-203ENST00000421710 OTUD6AQ7L8S5 288 aa28.08■■■□□ 2.09
SNAPC3-203ENST00000421710 OSMRQ99650 979 aa28.08■■■□□ 2.09
SNAPC3-203ENST00000421710 WNT7AO00755 349 aa28.07■■■□□ 2.08
SNAPC3-203ENST00000421710 GPR32O75388 356 aa28.07■■■□□ 2.08
SNAPC3-203ENST00000421710 U2AF2P26368 475 aaKnown RBP eCLIP28.07■■■□□ 2.08
SNAPC3-203ENST00000421710 NLRP11P59045 1033 aaKnown RBP28.07■■■□□ 2.08
SNAPC3-203ENST00000421710 NFX1Q12986 1120 aaKnown RBP28.07■■■□□ 2.08
SNAPC3-203ENST00000421710 SP7Q8TDD2 431 aaPredicted RBP28.07■■■□□ 2.08
SNAPC3-203ENST00000421710 ARNTL2Q8WYA1 636 aa28.07■■■□□ 2.08
SNAPC3-203ENST00000421710 TGS1Q96RS0 853 aaKnown RBP28.07■■■□□ 2.08
SNAPC3-203ENST00000421710 TSPYL2Q9H2G4 693 aaPredicted RBP28.07■■■□□ 2.08
SNAPC3-203ENST00000421710 CYP26B1Q9NR63 512 aa28.07■■■□□ 2.08
SNAPC3-203ENST00000421710 RNF216Q9NWF9 866 aaPredicted RBP28.07■■■□□ 2.08
SNAPC3-203ENST00000421710 NOC2LQ9Y3T9 749 aaKnown RBP28.07■■■□□ 2.08
SNAPC3-203ENST00000421710 GTF3C3Q9Y5Q9 886 aa28.07■■■□□ 2.08
SNAPC3-203ENST00000421710 LINC01553A4QN01 128 aa28.06■■■□□ 2.08
SNAPC3-203ENST00000421710 MAFO75444 373 aaPredicted RBP28.06■■■□□ 2.08
SNAPC3-203ENST00000421710 TTC38Q5R3I4 469 aa28.06■■■□□ 2.08
SNAPC3-203ENST00000421710 SLC7A3Q8WY07 619 aa28.06■■■□□ 2.08
SNAPC3-203ENST00000421710 DYDC2Q96IM9 177 aa28.06■■■□□ 2.08
SNAPC3-203ENST00000421710 SCLT1Q96NL6 688 aa28.06■■■□□ 2.08
SNAPC3-203ENST00000421710 CEP89Q96ST8 783 aa28.06■■■□□ 2.08
SNAPC3-203ENST00000421710 PPP1R16BQ96T49 567 aa28.06■■■□□ 2.08
SNAPC3-203ENST00000421710 CERS4Q9HA82 394 aa28.06■■■□□ 2.08
SNAPC3-203ENST00000421710 CDHR5Q9HBB8 845 aa28.06■■■□□ 2.08
SNAPC3-203ENST00000421710 ERVK-5Q9HDB9 667 aa28.06■■■□□ 2.08
SNAPC3-203ENST00000421710 IGKV6-21A0A0C4DH24 114 aa28.05■■■□□ 2.08
SNAPC3-203ENST00000421710 TMEM150BA6NC51 233 aa28.05■■■□□ 2.08
SNAPC3-203ENST00000421710 ARHGEF15O94989 841 aa28.05■■■□□ 2.08
SNAPC3-203ENST00000421710 IGFBP4P22692 258 aa28.05■■■□□ 2.08
SNAPC3-203ENST00000421710 GJB2P29033 226 aa28.05■■■□□ 2.08
SNAPC3-203ENST00000421710 YWHABP31946 246 aaKnown RBP28.05■■■□□ 2.08
SNAPC3-203ENST00000421710 TMEM266Q2M3C6 531 aa28.05■■■□□ 2.08
SNAPC3-203ENST00000421710 PLA2G4FQ68DD2 849 aa28.05■■■□□ 2.08
SNAPC3-203ENST00000421710 TMEM40Q8WWA1 233 aa28.05■■■□□ 2.08
SNAPC3-203ENST00000421710 CEP170P1Q96L14 293 aa28.05■■■□□ 2.08
SNAPC3-203ENST00000421710 EIF2AK1Q9BQI3 630 aaKnown RBP28.05■■■□□ 2.08
SNAPC3-203ENST00000421710 RGL1Q9NZL6 768 aa28.05■■■□□ 2.08
SNAPC3-203ENST00000421710 SMC3Q9UQE7 1217 aa28.05■■■□□ 2.08
SNAPC3-203ENST00000421710 TTC3P53804 2025 aa28.04■■■□□ 2.08
SNAPC3-203ENST00000421710 RBAK-RBAKDNI3L0D1 243 aa28.04■■■□□ 2.08
SNAPC3-203ENST00000421710 OR52Z1P0C646 297 aa28.04■■■□□ 2.08
SNAPC3-203ENST00000421710 STAG3L1P0CL83 205 aa28.04■■■□□ 2.08
SNAPC3-203ENST00000421710 RFC5P40937 340 aa28.04■■■□□ 2.08
SNAPC3-203ENST00000421710 GPC3P51654 580 aa28.04■■■□□ 2.08
SNAPC3-203ENST00000421710 ERVK-21P61565 698 aa28.04■■■□□ 2.08
SNAPC3-203ENST00000421710 CYP4A11Q02928 519 aa28.04■■■□□ 2.08
SNAPC3-203ENST00000421710 LINC01599Q8WXQ3 324 aa28.04■■■□□ 2.08
SNAPC3-203ENST00000421710 SAMD11Q96NU1 681 aa28.04■■■□□ 2.08
SNAPC3-203ENST00000421710 SH2D3AQ9BRG2 576 aa28.04■■■□□ 2.08
SNAPC3-203ENST00000421710 TMEM60Q9H2L4 133 aa28.04■■■□□ 2.08
SNAPC3-203ENST00000421710 ADAMTS10Q9H324 1103 aa28.04■■■□□ 2.08
SNAPC3-203ENST00000421710 ST3GAL5Q9UNP4 418 aa28.04■■■□□ 2.08
SNAPC3-203ENST00000421710 DENND3A2RUS2 1198 aa28.03■■■□□ 2.08
SNAPC3-203ENST00000421710 H3BQV1 296 aa28.03■■■□□ 2.08
SNAPC3-203ENST00000421710 GTPBP6O43824 516 aaPredicted RBP28.03■■■□□ 2.08
SNAPC3-203ENST00000421710 EIF4BP23588 611 aaKnown RBP28.03■■■□□ 2.08
SNAPC3-203ENST00000421710 ADGRE1Q14246 886 aa28.03■■■□□ 2.08
SNAPC3-203ENST00000421710 CTTNQ14247 550 aaKnown RBP28.03■■■□□ 2.08
SNAPC3-203ENST00000421710 ZNF174Q15697 407 aa28.03■■■□□ 2.08
SNAPC3-203ENST00000421710 NPAS4Q8IUM7 802 aa28.03■■■□□ 2.08
SNAPC3-203ENST00000421710 TPH2Q8IWU9 490 aa28.03■■■□□ 2.08
SNAPC3-203ENST00000421710 SLC17A8Q8NDX2 589 aa28.03■■■□□ 2.08
SNAPC3-203ENST00000421710 NLRP7Q8WX94 980 aa28.03■■■□□ 2.08
SNAPC3-203ENST00000421710 HSD17B14Q9BPX1 270 aa28.03■■■□□ 2.08
SNAPC3-203ENST00000421710 TMX1Q9H3N1 280 aa28.03■■■□□ 2.08
SNAPC3-203ENST00000421710 C1orf112Q9NSG2 853 aa28.03■■■□□ 2.08
SNAPC3-203ENST00000421710 WRAP73Q9P2S5 460 aaPredicted RBP28.03■■■□□ 2.08
SNAPC3-203ENST00000421710 GAS2O43903 313 aaKnown RBP28.02■■■□□ 2.08
SNAPC3-203ENST00000421710 SLITRK3O94933 977 aa28.02■■■□□ 2.08
SNAPC3-203ENST00000421710 LYPLA2O95372 231 aa28.02■■■□□ 2.08
SNAPC3-203ENST00000421710 POLGP54098 1239 aaPredicted RBP28.02■■■□□ 2.08
SNAPC3-203ENST00000421710 FAM228AQ86W67 206 aa28.02■■■□□ 2.08
SNAPC3-203ENST00000421710 TRANK1O15050 2925 aa28.01■■■□□ 2.07
SNAPC3-203ENST00000421710 NPEPPSP55786 919 aa28.01■■■□□ 2.07
SNAPC3-203ENST00000421710 MCTP1Q6DN14 999 aa28.01■■■□□ 2.07
SNAPC3-203ENST00000421710 ZNF410Q86VK4 478 aa28.01■■■□□ 2.07
SNAPC3-203ENST00000421710 ERMNQ8TAM6 284 aa28.01■■■□□ 2.07
SNAPC3-203ENST00000421710 CCDC43Q96MW1 224 aaKnown RBP28.01■■■□□ 2.07
SNAPC3-203ENST00000421710 GCOM2Q9BZD3 368 aaPredicted RBP28.01■■■□□ 2.07
SNAPC3-203ENST00000421710 SUCLA2Q9P2R7 463 aaPredicted RBP28.01■■■□□ 2.07
SNAPC3-203ENST00000421710 ADGRA3Q8IWK6 1321 aa28■■■□□ 2.07
SNAPC3-203ENST00000421710 POTEMA6NI47 508 aa28■■■□□ 2.07
SNAPC3-203ENST00000421710 DARSP14868 501 aaKnown RBP28■■■□□ 2.07
SNAPC3-203ENST00000421710 POU3F3P20264 500 aaPredicted RBP28■■■□□ 2.07
SNAPC3-203ENST00000421710 SARSP49591 514 aaKnown RBP28■■■□□ 2.07
SNAPC3-203ENST00000421710 XKR9Q5GH70 373 aa28■■■□□ 2.07
SNAPC3-203ENST00000421710 RTN4RL1Q86UN2 441 aaPredicted RBP28■■■□□ 2.07
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms