RNA–Protein interactions for RNA: ENST00000420522.1

LINC01646-201, Transcript of long intergenic non-protein coding RNA 1646, humanhuman

TSL 3 BASIC

Gene LINC01646, Length 682 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01646-201ENST00000420522 KRTAP4-6Q9BYQ5 205 aa5.68□□□□□ -1.5
LINC01646-201ENST00000420522 CDH19Q9H159 772 aa5.68□□□□□ -1.5
LINC01646-201ENST00000420522 TCF7L1Q9HCS4 588 aa5.68□□□□□ -1.5
LINC01646-201ENST00000420522 ZIM2Q9NZV7 527 aa5.68□□□□□ -1.5
LINC01646-201ENST00000420522 TMPRSS11EQ9UL52 423 aa5.68□□□□□ -1.5
LINC01646-201ENST00000420522 PCDHGA9Q9Y5G4 932 aaKnown RBP5.68□□□□□ -1.5
LINC01646-201ENST00000420522 PCDHGA8Q9Y5G5 932 aa5.68□□□□□ -1.5
LINC01646-201ENST00000420522 PCDHGA7Q9Y5G6 932 aa5.68□□□□□ -1.5
LINC01646-201ENST00000420522 PCDHGA6Q9Y5G7 932 aa5.68□□□□□ -1.5
LINC01646-201ENST00000420522 PCDHGA3Q9Y5H0 932 aa5.68□□□□□ -1.5
LINC01646-201ENST00000420522 PCDHGA2Q9Y5H1 932 aa5.68□□□□□ -1.5
LINC01646-201ENST00000420522 ST20-MTHFSA0A0A6YYL1 179 aa5.67□□□□□ -1.5
LINC01646-201ENST00000420522 KLHL33A6NCF5 533 aa5.67□□□□□ -1.5
LINC01646-201ENST00000420522 TSPAN6O43657 245 aa5.67□□□□□ -1.5
LINC01646-201ENST00000420522 MAFO75444 373 aaPredicted RBP5.67□□□□□ -1.5
LINC01646-201ENST00000420522 ABLIM3O94929 683 aa5.67□□□□□ -1.5
LINC01646-201ENST00000420522 SNUPNO95149 360 aaKnown RBP5.67□□□□□ -1.5
LINC01646-201ENST00000420522 PFKMP08237 780 aa5.67□□□□□ -1.5
LINC01646-201ENST00000420522 APEX1P27695 318 aaKnown RBP5.67□□□□□ -1.5
LINC01646-201ENST00000420522 RECQLP46063 649 aaPredicted RBP5.67□□□□□ -1.5
LINC01646-201ENST00000420522 GLRBP48167 497 aa5.67□□□□□ -1.5
LINC01646-201ENST00000420522 MRPS9P82933 396 aaKnown RBP5.67□□□□□ -1.5
LINC01646-201ENST00000420522 RTP5Q14D33 572 aa5.67□□□□□ -1.5
LINC01646-201ENST00000420522 CPEB4Q17RY0 729 aaKnown RBP eCLIP5.67□□□□□ -1.5
LINC01646-201ENST00000420522 PHF19Q5T6S3 580 aa5.67□□□□□ -1.5
LINC01646-201ENST00000420522 KANK2Q63ZY3 851 aa5.67□□□□□ -1.5
LINC01646-201ENST00000420522 DPP8Q6V1X1 898 aaPredicted RBP5.67□□□□□ -1.5
LINC01646-201ENST00000420522 TTLL7Q6ZT98 887 aa5.67□□□□□ -1.5
LINC01646-201ENST00000420522 CXXC5Q7LFL8 322 aaKnown RBP5.67□□□□□ -1.5
LINC01646-201ENST00000420522 KCNK18Q7Z418 384 aa5.67□□□□□ -1.5
LINC01646-201ENST00000420522 PNMA8AQ86V59 439 aaPredicted RBP5.67□□□□□ -1.5
LINC01646-201ENST00000420522 LYSMD2Q8IV50 215 aa5.67□□□□□ -1.5
LINC01646-201ENST00000420522 STPG3Q8N7X2 389 aa5.67□□□□□ -1.5
LINC01646-201ENST00000420522 TTLL6Q8N841 843 aa5.67□□□□□ -1.5
LINC01646-201ENST00000420522 KCNN1Q92952 543 aa5.67□□□□□ -1.5
LINC01646-201ENST00000420522 RAX2Q96IS3 184 aa5.67□□□□□ -1.5
LINC01646-201ENST00000420522 NOX5Q96PH1 765 aa5.67□□□□□ -1.5
LINC01646-201ENST00000420522 WRNIP1Q96S55 665 aa5.67□□□□□ -1.5
LINC01646-201ENST00000420522 TACO1Q9BSH4 297 aaKnown RBP5.67□□□□□ -1.5
LINC01646-201ENST00000420522 PRDM12Q9H4Q4 367 aa5.67□□□□□ -1.5
LINC01646-201ENST00000420522 ZNF277Q9NRM2 450 aaPredicted RBP5.67□□□□□ -1.5
LINC01646-201ENST00000420522 KCND1Q9NSA2 647 aa5.67□□□□□ -1.5
LINC01646-201ENST00000420522 DNAJC28Q9NX36 388 aa5.67□□□□□ -1.5
LINC01646-201ENST00000420522 ZFP69BQ9UJL9 534 aa5.67□□□□□ -1.5
LINC01646-201ENST00000420522 DENND2AQ9ULE3 1009 aa5.67□□□□□ -1.5
LINC01646-201ENST00000420522 LUC7L2Q9Y383 392 aaKnown RBP5.67□□□□□ -1.5
LINC01646-201ENST00000420522 MRFAP1Q9Y605 127 aa5.67□□□□□ -1.5
LINC01646-201ENST00000420522 SCGB1D2O95969 90 aa5.66□□□□□ -1.5
LINC01646-201ENST00000420522 CHGBP05060 677 aa5.66□□□□□ -1.5
LINC01646-201ENST00000420522 LIMS1P48059 325 aa5.66□□□□□ -1.5
LINC01646-201ENST00000420522 MTNR1BP49286 362 aa5.66□□□□□ -1.5
LINC01646-201ENST00000420522 IL13RA1P78552 427 aa5.66□□□□□ -1.5
LINC01646-201ENST00000420522 HTRA3P83110 453 aa5.66□□□□□ -1.5
LINC01646-201ENST00000420522 SRSF2Q01130 221 aaKnown RBP5.66□□□□□ -1.5
LINC01646-201ENST00000420522 NFATC3Q12968 1075 aa5.66□□□□□ -1.5
LINC01646-201ENST00000420522 ODF1Q14990 250 aa5.66□□□□□ -1.5
LINC01646-201ENST00000420522 LRRC41Q15345 812 aa5.66□□□□□ -1.5
LINC01646-201ENST00000420522 TMEFF1Q8IYR6 380 aa5.66□□□□□ -1.5
LINC01646-201ENST00000420522 CPA6Q8N4T0 437 aa5.66□□□□□ -1.5
LINC01646-201ENST00000420522 WDR48Q8TAF3 677 aa5.66□□□□□ -1.5
LINC01646-201ENST00000420522 RSAD2Q8WXG1 361 aa5.66□□□□□ -1.5
LINC01646-201ENST00000420522 SSH1Q8WYL5 1049 aa5.66□□□□□ -1.5
LINC01646-201ENST00000420522 RPGRQ92834 1020 aaKnown RBP5.66□□□□□ -1.5
LINC01646-201ENST00000420522 TSR2Q969E8 191 aaKnown RBP5.66□□□□□ -1.5
LINC01646-201ENST00000420522 RHOBTB2Q9BYZ6 727 aa5.66□□□□□ -1.5
LINC01646-201ENST00000420522 PITHD1Q9GZP4 211 aaPredicted RBP5.66□□□□□ -1.5
LINC01646-201ENST00000420522 MTG2Q9H4K7 406 aa5.66□□□□□ -1.5
LINC01646-201ENST00000420522 LUC7LQ9NQ29 371 aaKnown RBP5.66□□□□□ -1.5
LINC01646-201ENST00000420522 ZNF180Q9UJW8 692 aa5.66□□□□□ -1.5
LINC01646-201ENST00000420522 EDARQ9UNE0 448 aa5.66□□□□□ -1.5
LINC01646-201ENST00000420522 MYPNQ86TC9 1320 aa5.66□□□□□ -1.5
LINC01646-201ENST00000420522 A0A0A6YYJ9 748 aa5.65□□□□□ -1.5
LINC01646-201ENST00000420522 OPHN1O60890 802 aa5.65□□□□□ -1.5
LINC01646-201ENST00000420522 RFPL1O75677 317 aa5.65□□□□□ -1.5
LINC01646-201ENST00000420522 PCDH8O95206 1070 aa5.65□□□□□ -1.5
LINC01646-201ENST00000420522 LPLP06858 475 aa5.65□□□□□ -1.5
LINC01646-201ENST00000420522 MTHFD2P13995 350 aa5.65□□□□□ -1.5
LINC01646-201ENST00000420522 ZSCAN20P17040 1043 aaPredicted RBP5.65□□□□□ -1.5
LINC01646-201ENST00000420522 AGXTP21549 392 aa5.65□□□□□ -1.5
LINC01646-201ENST00000420522 GLDCP23378 1020 aa5.65□□□□□ -1.5
LINC01646-201ENST00000420522 MESP2Q0VG99 397 aa5.65□□□□□ -1.5
LINC01646-201ENST00000420522 TRIM25Q14258 630 aaKnown RBP5.65□□□□□ -1.5
LINC01646-201ENST00000420522 CLUL1Q15846 466 aa5.65□□□□□ -1.5
LINC01646-201ENST00000420522 TOR2AQ5JU69 321 aa5.65□□□□□ -1.5
LINC01646-201ENST00000420522 TMEM240Q5SV17 173 aa5.65□□□□□ -1.5
LINC01646-201ENST00000420522 SLC41A1Q8IVJ1 513 aa5.65□□□□□ -1.5
LINC01646-201ENST00000420522 CHPFQ8IZ52 775 aa5.65□□□□□ -1.5
LINC01646-201ENST00000420522 ZBTB8AQ96BR9 441 aa5.65□□□□□ -1.5
LINC01646-201ENST00000420522 SIGLEC10Q96LC7 697 aa5.65□□□□□ -1.5
LINC01646-201ENST00000420522 ZSWIM3Q96MP5 696 aa5.65□□□□□ -1.5
LINC01646-201ENST00000420522 QRSL1Q9H0R6 528 aaKnown RBP5.65□□□□□ -1.5
LINC01646-201ENST00000420522 KCTD10Q9H3F6 313 aa5.65□□□□□ -1.5
LINC01646-201ENST00000420522 KCMF1Q9P0J7 381 aa5.65□□□□□ -1.5
LINC01646-201ENST00000420522 IP6K2Q9UHH9 426 aa5.65□□□□□ -1.5
LINC01646-201ENST00000420522 PRSS50Q9UI38 385 aa5.65□□□□□ -1.5
LINC01646-201ENST00000420522 GPR45Q9Y5Y3 372 aa5.65□□□□□ -1.5
LINC01646-201ENST00000420522 ETV2O00321 342 aaPredicted RBP5.64□□□□□ -1.51
LINC01646-201ENST00000420522 MAFGO15525 162 aa5.64□□□□□ -1.51
LINC01646-201ENST00000420522 XPOTO43592 962 aaKnown RBP5.64□□□□□ -1.51
LINC01646-201ENST00000420522 CYP7B1O75881 506 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms