RNA–Protein interactions for RNA: ENST00000419020.1

DDX39B-205, Transcript of DExD-box helicase 39B, humanhuman

TSL 3

Gene DDX39B, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-205ENST00000419020 GMEB2Q9UKD1 530 aa13.43□□□□□ -0.26
DDX39B-205ENST00000419020 PATJQ8NI35 1801 aa13.43□□□□□ -0.26
DDX39B-205ENST00000419020 KDM3AQ9Y4C1 1321 aa13.42□□□□□ -0.26
DDX39B-205ENST00000419020 ASH1LQ9NR48 2969 aaKnown RBP13.42□□□□□ -0.26
DDX39B-205ENST00000419020 SMARCA5O60264 1052 aaPredicted RBP13.42□□□□□ -0.26
DDX39B-205ENST00000419020 TBC1D4O60343 1298 aa13.42□□□□□ -0.26
DDX39B-205ENST00000419020 HMMRO75330 724 aa13.42□□□□□ -0.26
DDX39B-205ENST00000419020 PTPN14Q15678 1187 aa13.42□□□□□ -0.26
DDX39B-205ENST00000419020 TSHZ3Q63HK5 1081 aa13.42□□□□□ -0.26
DDX39B-205ENST00000419020 TMEM117Q9H0C3 514 aa13.42□□□□□ -0.26
DDX39B-205ENST00000419020 VAT1LQ9HCJ6 419 aa13.42□□□□□ -0.26
DDX39B-205ENST00000419020 RTEL1Q9NZ71 1219 aa13.42□□□□□ -0.26
DDX39B-205ENST00000419020 NBEAQ8NFP9 2946 aa13.41□□□□□ -0.26
DDX39B-205ENST00000419020 MIA3Q5JRA6 1907 aa13.41□□□□□ -0.26
DDX39B-205ENST00000419020 FIBPO43427 364 aa13.41□□□□□ -0.26
DDX39B-205ENST00000419020 DHX16O60231 1041 aaKnown RBP13.41□□□□□ -0.26
DDX39B-205ENST00000419020 INSRRP14616 1297 aa13.41□□□□□ -0.26
DDX39B-205ENST00000419020 GBP2P32456 591 aaPredicted RBP13.41□□□□□ -0.26
DDX39B-205ENST00000419020 STARD6P59095 220 aa13.41□□□□□ -0.26
DDX39B-205ENST00000419020 FAM189BP81408 668 aa13.41□□□□□ -0.26
DDX39B-205ENST00000419020 KRT76Q01546 638 aa13.41□□□□□ -0.26
DDX39B-205ENST00000419020 ZMYM1Q5SVZ6 1142 aa13.41□□□□□ -0.26
DDX39B-205ENST00000419020 FCHSD1Q86WN1 690 aa13.41□□□□□ -0.26
DDX39B-205ENST00000419020 LRRC43Q8N309 656 aa13.41□□□□□ -0.26
DDX39B-205ENST00000419020 TMEM87AQ8NBN3 555 aa13.41□□□□□ -0.26
DDX39B-205ENST00000419020 AMNQ9BXJ7 453 aa13.41□□□□□ -0.26
DDX39B-205ENST00000419020 BCO2Q9BYV7 579 aa13.41□□□□□ -0.26
DDX39B-205ENST00000419020 ELAC1Q9H777 363 aaKnown RBP13.41□□□□□ -0.26
DDX39B-205ENST00000419020 RNF19AQ9NV58 838 aa13.41□□□□□ -0.26
DDX39B-205ENST00000419020 EPS15L1Q9UBC2 864 aa13.41□□□□□ -0.26
DDX39B-205ENST00000419020 NOC2LQ9Y3T9 749 aaKnown RBP13.41□□□□□ -0.26
DDX39B-205ENST00000419020 WDFY3Q8IZQ1 3526 aa13.41□□□□□ -0.26
DDX39B-205ENST00000419020 SPDYE4A6NLX3 237 aa13.4□□□□□ -0.26
DDX39B-205ENST00000419020 C1QTNF9BB2RNN3 333 aa13.4□□□□□ -0.26
DDX39B-205ENST00000419020 GDF9O60383 454 aa13.4□□□□□ -0.26
DDX39B-205ENST00000419020 PPP1R11O60927 126 aaPredicted RBP13.4□□□□□ -0.26
DDX39B-205ENST00000419020 RPS6KA5O75582 802 aa13.4□□□□□ -0.26
DDX39B-205ENST00000419020 C1QTNF9P0C862 333 aa13.4□□□□□ -0.26
DDX39B-205ENST00000419020 BMS1Q14692 1282 aaKnown RBP13.4□□□□□ -0.26
DDX39B-205ENST00000419020 VPS53Q5VIR6 699 aa13.4□□□□□ -0.26
DDX39B-205ENST00000419020 FAM43BQ6ZT52 329 aaPredicted RBP13.4□□□□□ -0.26
DDX39B-205ENST00000419020 VPS52Q8N1B4 723 aa13.4□□□□□ -0.26
DDX39B-205ENST00000419020 TMEM40Q8WWA1 233 aa13.4□□□□□ -0.26
DDX39B-205ENST00000419020 SENP7Q9BQF6 1050 aa13.4□□□□□ -0.26
DDX39B-205ENST00000419020 ZBP1Q9H171 429 aa13.4□□□□□ -0.26
DDX39B-205ENST00000419020 CDHR5Q9HBB8 845 aa13.4□□□□□ -0.26
DDX39B-205ENST00000419020 GINS2Q9Y248 185 aa13.4□□□□□ -0.26
DDX39B-205ENST00000419020 IRAK3Q9Y616 596 aa13.4□□□□□ -0.26
DDX39B-205ENST00000419020 COL4A3Q01955 1670 aa13.4□□□□□ -0.26
DDX39B-205ENST00000419020 DSPP15924 2871 aaKnown RBP13.39□□□□□ -0.27
DDX39B-205ENST00000419020 GSTTP1A0A1W2PQM5 241 aa13.39□□□□□ -0.27
DDX39B-205ENST00000419020 RRN3P2A6NIE6 340 aa13.39□□□□□ -0.27
DDX39B-205ENST00000419020 NT5C1B-RDH14C9J2C7 533 aa13.39□□□□□ -0.27
DDX39B-205ENST00000419020 STAM2O75886 525 aa13.39□□□□□ -0.27
DDX39B-205ENST00000419020 METAP2P50579 478 aaKnown RBP eCLIP13.39□□□□□ -0.27
DDX39B-205ENST00000419020 LPAL2Q16609 132 aa13.39□□□□□ -0.27
DDX39B-205ENST00000419020 TSSK4Q6SA08 328 aa13.39□□□□□ -0.27
DDX39B-205ENST00000419020 LRSAM1Q6UWE0 723 aa13.39□□□□□ -0.27
DDX39B-205ENST00000419020 C15orf39Q6ZRI6 1047 aa13.39□□□□□ -0.27
DDX39B-205ENST00000419020 SAMD3Q8N6K7 520 aa13.39□□□□□ -0.27
DDX39B-205ENST00000419020 TRAPPC12Q8WVT3 735 aa13.39□□□□□ -0.27
DDX39B-205ENST00000419020 DDX1Q92499 740 aaKnown RBP13.39□□□□□ -0.27
DDX39B-205ENST00000419020 NXPE3Q969Y0 559 aa13.39□□□□□ -0.27
DDX39B-205ENST00000419020 MYADMQ96S97 322 aa13.39□□□□□ -0.27
DDX39B-205ENST00000419020 LRRCC1Q9C099 1032 aa13.39□□□□□ -0.27
DDX39B-205ENST00000419020 SLC2A4RGQ9NR83 387 aa13.39□□□□□ -0.27
DDX39B-205ENST00000419020 ST3GAL5Q9UNP4 418 aa13.39□□□□□ -0.27
DDX39B-205ENST00000419020 MTF2Q9Y483 593 aaPredicted RBP13.39□□□□□ -0.27
DDX39B-205ENST00000419020 PCDHA2Q9Y5H9 948 aa13.39□□□□□ -0.27
DDX39B-205ENST00000419020 MAST4O15021 2626 aa13.39□□□□□ -0.27
DDX39B-205ENST00000419020 KANSL1LA0AUZ9 987 aa13.38□□□□□ -0.27
DDX39B-205ENST00000419020 GCOM1H8Y6P7 765 aaPredicted RBP13.38□□□□□ -0.27
DDX39B-205ENST00000419020 POLR2MP0CAP2 368 aa13.38□□□□□ -0.27
DDX39B-205ENST00000419020 CTSAP10619 480 aa13.38□□□□□ -0.27
DDX39B-205ENST00000419020 WTAPQ15007 396 aa13.38□□□□□ -0.27
DDX39B-205ENST00000419020 ASPRV1Q53RT3 343 aa13.38□□□□□ -0.27
DDX39B-205ENST00000419020 UNQ6494/PRO21346Q6UXR6 183 aa13.38□□□□□ -0.27
DDX39B-205ENST00000419020 KDF1Q8NAX2 398 aaPredicted RBP13.38□□□□□ -0.27
DDX39B-205ENST00000419020 PNMA1Q8ND90 353 aa13.38□□□□□ -0.27
DDX39B-205ENST00000419020 SHDQ96IW2 340 aa13.38□□□□□ -0.27
DDX39B-205ENST00000419020 ZKSCAN3Q9BRR0 538 aa13.38□□□□□ -0.27
DDX39B-205ENST00000419020 SEMA4GQ9NTN9 838 aa13.38□□□□□ -0.27
DDX39B-205ENST00000419020 DOCK8Q8NF50 2099 aa13.38□□□□□ -0.27
DDX39B-205ENST00000419020 FRMPD4Q14CM0 1322 aa13.38□□□□□ -0.27
DDX39B-205ENST00000419020 SMG1Q96Q15 3661 aaKnown RBP13.37□□□□□ -0.27
DDX39B-205ENST00000419020 SMIM35A0A1B0GVV1 85 aa13.37□□□□□ -0.27
DDX39B-205ENST00000419020 HOXA2O43364 376 aa13.37□□□□□ -0.27
DDX39B-205ENST00000419020 ZIC2O95409 532 aaPredicted RBP13.37□□□□□ -0.27
DDX39B-205ENST00000419020 GIT2Q14161 759 aa13.37□□□□□ -0.27
DDX39B-205ENST00000419020 LAIR1Q6GTX8 287 aa13.37□□□□□ -0.27
DDX39B-205ENST00000419020 PRR23CQ6ZRP0 262 aa13.37□□□□□ -0.27
DDX39B-205ENST00000419020 PPFIBP1Q86W92 1011 aa13.37□□□□□ -0.27
DDX39B-205ENST00000419020 TMEM173Q86WV6 379 aaPredicted RBP13.37□□□□□ -0.27
DDX39B-205ENST00000419020 ABI1Q8IZP0 508 aa13.37□□□□□ -0.27
DDX39B-205ENST00000419020 NME8Q8N427 588 aa13.37□□□□□ -0.27
DDX39B-205ENST00000419020 ST13P5Q8NFI4 369 aaPredicted RBP13.37□□□□□ -0.27
DDX39B-205ENST00000419020 PANK1Q8TE04 598 aa13.37□□□□□ -0.27
DDX39B-205ENST00000419020 SEPT1Q8WYJ6 367 aa13.37□□□□□ -0.27
DDX39B-205ENST00000419020 TMEM169Q96HH4 297 aa13.37□□□□□ -0.27
DDX39B-205ENST00000419020 DDX23Q9BUQ8 820 aaKnown RBP13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms