RNA–Protein interactions for RNA: ENST00000418336.6

PKNOX1-202, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-202ENST00000418336 CALCRLQ16602 461 aa23.16■■□□□ 1.3
PKNOX1-202ENST00000418336 KIZQ2M2Z5 673 aa23.16■■□□□ 1.3
PKNOX1-202ENST00000418336 TMEM266Q2M3C6 531 aa23.16■■□□□ 1.3
PKNOX1-202ENST00000418336 RGL1Q9NZL6 768 aa23.16■■□□□ 1.3
PKNOX1-202ENST00000418336 ARID2Q68CP9 1835 aa23.15■■□□□ 1.3
PKNOX1-202ENST00000418336 RFXAPO00287 272 aa23.15■■□□□ 1.3
PKNOX1-202ENST00000418336 LPXNO60711 386 aa23.15■■□□□ 1.3
PKNOX1-202ENST00000418336 SLITRK3O94933 977 aa23.15■■□□□ 1.3
PKNOX1-202ENST00000418336 CRYBB1P53674 252 aaPredicted RBP23.15■■□□□ 1.3
PKNOX1-202ENST00000418336 SAFBQ15424 915 aaKnown RBP eCLIP23.15■■□□□ 1.3
PKNOX1-202ENST00000418336 MTERF2Q49AM1 385 aa23.15■■□□□ 1.3
PKNOX1-202ENST00000418336 PLA2G4FQ68DD2 849 aa23.15■■□□□ 1.3
PKNOX1-202ENST00000418336 NCAPH2Q6IBW4 605 aa23.15■■□□□ 1.3
PKNOX1-202ENST00000418336 FAM228AQ86W67 206 aa23.15■■□□□ 1.3
PKNOX1-202ENST00000418336 C4orf19Q8IY42 314 aa23.15■■□□□ 1.3
PKNOX1-202ENST00000418336 METTL13Q8N6R0 699 aa23.15■■□□□ 1.3
PKNOX1-202ENST00000418336 FAM184AQ8NB25 1140 aa23.15■■□□□ 1.3
PKNOX1-202ENST00000418336 DYDC2Q96IM9 177 aa23.15■■□□□ 1.3
PKNOX1-202ENST00000418336 PPP1R16BQ96T49 567 aa23.15■■□□□ 1.3
PKNOX1-202ENST00000418336 OSMRQ99650 979 aa23.15■■□□□ 1.3
PKNOX1-202ENST00000418336 TSPYL2Q9H2G4 693 aaPredicted RBP23.15■■□□□ 1.3
PKNOX1-202ENST00000418336 CERS4Q9HA82 394 aa23.15■■□□□ 1.3
PKNOX1-202ENST00000418336 SEPT9Q9UHD8 586 aaPredicted RBP23.15■■□□□ 1.3
PKNOX1-202ENST00000418336 VCANP13611 3396 aa23.15■■□□□ 1.3
PKNOX1-202ENST00000418336 ZBTB39O15060 712 aa23.14■■□□□ 1.29
PKNOX1-202ENST00000418336 MAFO75444 373 aaPredicted RBP23.14■■□□□ 1.29
PKNOX1-202ENST00000418336 POU3F3P20264 500 aaPredicted RBP23.14■■□□□ 1.29
PKNOX1-202ENST00000418336 MCM2P49736 904 aa23.14■■□□□ 1.29
PKNOX1-202ENST00000418336 GPC3P51654 580 aa23.14■■□□□ 1.29
PKNOX1-202ENST00000418336 NPEPPSP55786 919 aa23.14■■□□□ 1.29
PKNOX1-202ENST00000418336 NBR1Q14596 966 aa23.14■■□□□ 1.29
PKNOX1-202ENST00000418336 MAFAQ8NHW3 353 aaPredicted RBP23.14■■□□□ 1.29
PKNOX1-202ENST00000418336 ZNF689Q96CS4 500 aaPredicted RBP23.14■■□□□ 1.29
PKNOX1-202ENST00000418336 LXNQ9BS40 222 aa23.14■■□□□ 1.29
PKNOX1-202ENST00000418336 TTC12Q9H892 705 aaPredicted RBP23.14■■□□□ 1.29
PKNOX1-202ENST00000418336 INSL6Q9Y581 213 aa23.14■■□□□ 1.29
PKNOX1-202ENST00000418336 DDX11L8A8MPP1 907 aa23.13■■□□□ 1.29
PKNOX1-202ENST00000418336 M0QZ92 97 aa23.13■■□□□ 1.29
PKNOX1-202ENST00000418336 LYPLA2O95372 231 aa23.13■■□□□ 1.29
PKNOX1-202ENST00000418336 BAG4O95429 457 aaKnown RBP23.13■■□□□ 1.29
PKNOX1-202ENST00000418336 MCM7P33993 719 aa23.13■■□□□ 1.29
PKNOX1-202ENST00000418336 ERVK-21P61565 698 aa23.13■■□□□ 1.29
PKNOX1-202ENST00000418336 CUL4AQ13619 759 aa23.13■■□□□ 1.29
PKNOX1-202ENST00000418336 EIF2AK1Q9BQI3 630 aaKnown RBP23.13■■□□□ 1.29
PKNOX1-202ENST00000418336 ZBED2Q9BTP6 218 aa23.13■■□□□ 1.29
PKNOX1-202ENST00000418336 CYP26B1Q9NR63 512 aa23.13■■□□□ 1.29
PKNOX1-202ENST00000418336 PCDHA12Q9UN75 941 aa23.13■■□□□ 1.29
PKNOX1-202ENST00000418336 XIRP2A4UGR9 3374 aa23.13■■□□□ 1.29
PKNOX1-202ENST00000418336 GJB2P29033 226 aa23.12■■□□□ 1.29
PKNOX1-202ENST00000418336 TXKP42681 527 aa23.12■■□□□ 1.29
PKNOX1-202ENST00000418336 NLRP11P59045 1033 aaKnown RBP23.12■■□□□ 1.29
PKNOX1-202ENST00000418336 TBC1D8BQ0IIM8 1120 aa23.12■■□□□ 1.29
PKNOX1-202ENST00000418336 PAK2Q13177 524 aa23.12■■□□□ 1.29
PKNOX1-202ENST00000418336 ORC2Q13416 577 aaPredicted RBP23.12■■□□□ 1.29
PKNOX1-202ENST00000418336 CTTNQ14247 550 aaKnown RBP23.12■■□□□ 1.29
PKNOX1-202ENST00000418336 DSC3Q14574 896 aa23.12■■□□□ 1.29
PKNOX1-202ENST00000418336 ZNF174Q15697 407 aa23.12■■□□□ 1.29
PKNOX1-202ENST00000418336 FTHL17Q9BXU8 183 aa23.12■■□□□ 1.29
PKNOX1-202ENST00000418336 DHX33Q9H6R0 707 aaKnown RBP23.12■■□□□ 1.29
PKNOX1-202ENST00000418336 ST3GAL5Q9UNP4 418 aa23.12■■□□□ 1.29
PKNOX1-202ENST00000418336 A0A0C4DFX4 3053 aa23.11■■□□□ 1.29
PKNOX1-202ENST00000418336 POTEMA6NI47 508 aa23.11■■□□□ 1.29
PKNOX1-202ENST00000418336 SPATA31C1P0DKV0 1188 aa23.11■■□□□ 1.29
PKNOX1-202ENST00000418336 ATP2B1P20020 1258 aa23.11■■□□□ 1.29
PKNOX1-202ENST00000418336 TRAPPC10P48553 1259 aa23.11■■□□□ 1.29
PKNOX1-202ENST00000418336 CYP4A11Q02928 519 aa23.11■■□□□ 1.29
PKNOX1-202ENST00000418336 SUGCTQ9HAC7 445 aa23.11■■□□□ 1.29
PKNOX1-202ENST00000418336 AKT3Q9Y243 479 aa23.11■■□□□ 1.29
PKNOX1-202ENST00000418336 GINS2Q9Y248 185 aa23.11■■□□□ 1.29
PKNOX1-202ENST00000418336 RPS6KA5O75582 802 aa23.1■■□□□ 1.29
PKNOX1-202ENST00000418336 UPP2O95045 317 aa23.1■■□□□ 1.29
PKNOX1-202ENST00000418336 YWHABP31946 246 aaKnown RBP23.1■■□□□ 1.29
PKNOX1-202ENST00000418336 TTC38Q5R3I4 469 aa23.1■■□□□ 1.29
PKNOX1-202ENST00000418336 ARNTL2Q8WYA1 636 aa23.1■■□□□ 1.29
PKNOX1-202ENST00000418336 ZNF668Q96K58 619 aaPredicted RBP23.1■■□□□ 1.29
PKNOX1-202ENST00000418336 C17orf80Q9BSJ5 609 aa23.1■■□□□ 1.29
PKNOX1-202ENST00000418336 ZSWIM4Q9H7M6 989 aa23.1■■□□□ 1.29
PKNOX1-202ENST00000418336 RGS18Q9NS28 235 aa23.1■■□□□ 1.29
PKNOX1-202ENST00000418336 PRRC2BQ5JSZ5 2229 aaKnown RBP23.09■■□□□ 1.29
PKNOX1-202ENST00000418336 DGKIO75912 1065 aa23.09■■□□□ 1.29
PKNOX1-202ENST00000418336 DARSP14868 501 aaKnown RBP23.09■■□□□ 1.29
PKNOX1-202ENST00000418336 TMOD1P28289 359 aa23.09■■□□□ 1.29
PKNOX1-202ENST00000418336 GRB10Q13322 594 aa23.09■■□□□ 1.29
PKNOX1-202ENST00000418336 FAM43BQ6ZT52 329 aaPredicted RBP23.09■■□□□ 1.29
PKNOX1-202ENST00000418336 TGS1Q96RS0 853 aaKnown RBP23.09■■□□□ 1.29
PKNOX1-202ENST00000418336 MAP7D2Q96T17 732 aa23.09■■□□□ 1.29
PKNOX1-202ENST00000418336 GAS2L1Q99501 681 aaPredicted RBP23.09■■□□□ 1.29
PKNOX1-202ENST00000418336 XPNPEP1Q9NQW7 623 aa23.09■■□□□ 1.29
PKNOX1-202ENST00000418336 PPME1Q9Y570 386 aa23.09■■□□□ 1.29
PKNOX1-202ENST00000418336 PCDHB6Q9Y5E3 794 aa23.09■■□□□ 1.29
PKNOX1-202ENST00000418336 MTCH2Q9Y6C9 303 aa23.09■■□□□ 1.29
PKNOX1-202ENST00000418336 NLRC5Q86WI3 1866 aa23.09■■□□□ 1.29
PKNOX1-202ENST00000418336 C9IYK1 514 aa23.08■■□□□ 1.29
PKNOX1-202ENST00000418336 MARCH6O60337 910 aa23.08■■□□□ 1.29
PKNOX1-202ENST00000418336 EIF4BP23588 611 aaKnown RBP23.08■■□□□ 1.29
PKNOX1-202ENST00000418336 FAM189BP81408 668 aa23.08■■□□□ 1.29
PKNOX1-202ENST00000418336 ZNF710Q8N1W2 664 aa23.08■■□□□ 1.29
PKNOX1-202ENST00000418336 NEK9Q8TD19 979 aa23.08■■□□□ 1.29
PKNOX1-202ENST00000418336 RALGAPA2Q2PPJ7 1873 aa23.08■■□□□ 1.29
PKNOX1-202ENST00000418336 GPR182O15218 404 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms