RNA–Protein interactions for RNA: ENST00000417508.1

VPS16-204, Transcript of VPS16, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS16, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16-204ENST00000417508 STK36Q9NRP7 1315 aa20.78■□□□□ 0.92
VPS16-204ENST00000417508 FAM189BP81408 668 aa20.77■□□□□ 0.92
VPS16-204ENST00000417508 CDC42EP1Q00587 391 aa20.77■□□□□ 0.92
VPS16-204ENST00000417508 SCRN1Q12765 414 aa20.77■□□□□ 0.92
VPS16-204ENST00000417508 COL19A1Q14993 1142 aa20.77■□□□□ 0.92
VPS16-204ENST00000417508 KIZQ2M2Z5 673 aa20.77■□□□□ 0.92
VPS16-204ENST00000417508 TCEAL5Q5H9L2 206 aa20.77■□□□□ 0.92
VPS16-204ENST00000417508 MIER3Q7Z3K6 550 aa20.77■□□□□ 0.92
VPS16-204ENST00000417508 LINC01465Q8N7H1 131 aa20.77■□□□□ 0.92
VPS16-204ENST00000417508 TMEM40Q8WWA1 233 aa20.77■□□□□ 0.92
VPS16-204ENST00000417508 PABPC5Q96DU9 382 aaKnown RBP20.77■□□□□ 0.92
VPS16-204ENST00000417508 NECAB3Q96P71 396 aaPredicted RBP20.77■□□□□ 0.92
VPS16-204ENST00000417508 ADAM2Q99965 735 aa20.77■□□□□ 0.92
VPS16-204ENST00000417508 PHF20Q9BVI0 1012 aa20.77■□□□□ 0.92
VPS16-204ENST00000417508 C9IYK1 514 aa20.76■□□□□ 0.91
VPS16-204ENST00000417508 GRM6O15303 877 aa20.76■□□□□ 0.91
VPS16-204ENST00000417508 VTNP04004 478 aa20.76■□□□□ 0.91
VPS16-204ENST00000417508 KCNA5P22460 613 aa20.76■□□□□ 0.91
VPS16-204ENST00000417508 PRKCEQ02156 737 aa20.76■□□□□ 0.91
VPS16-204ENST00000417508 XKR3Q5GH77 459 aa20.76■□□□□ 0.91
VPS16-204ENST00000417508 B3GNT9Q6UX72 402 aa20.76■□□□□ 0.91
VPS16-204ENST00000417508 NEK9Q8TD19 979 aa20.76■□□□□ 0.91
VPS16-204ENST00000417508 WASF1Q92558 559 aa20.76■□□□□ 0.91
VPS16-204ENST00000417508 AIFM3Q96NN9 605 aa20.76■□□□□ 0.91
VPS16-204ENST00000417508 OSMRQ99650 979 aa20.76■□□□□ 0.91
VPS16-204ENST00000417508 NAP1L4Q99733 375 aaKnown RBP20.76■□□□□ 0.91
VPS16-204ENST00000417508 NIFKQ9BYG3 293 aaKnown RBP20.76■□□□□ 0.91
VPS16-204ENST00000417508 ELAC1Q9H777 363 aaKnown RBP20.76■□□□□ 0.91
VPS16-204ENST00000417508 PLAGL2Q9UPG8 496 aa20.76■□□□□ 0.91
VPS16-204ENST00000417508 AKT3Q9Y243 479 aa20.76■□□□□ 0.91
VPS16-204ENST00000417508 MRPL42Q9Y6G3 142 aaKnown RBP20.76■□□□□ 0.91
VPS16-204ENST00000417508 CCDC194A0A1B0GVG4 234 aa20.75■□□□□ 0.91
VPS16-204ENST00000417508 CHMP2AO43633 222 aa20.75■□□□□ 0.91
VPS16-204ENST00000417508 MGEA5O60502 916 aa20.75■□□□□ 0.91
VPS16-204ENST00000417508 TDP2O95551 362 aa20.75■□□□□ 0.91
VPS16-204ENST00000417508 MMP1P03956 469 aa20.75■□□□□ 0.91
VPS16-204ENST00000417508 GCFC2P16383 781 aaKnown RBP20.75■□□□□ 0.91
VPS16-204ENST00000417508 NLRP11P59045 1033 aaKnown RBP20.75■□□□□ 0.91
VPS16-204ENST00000417508 TBC1D8BQ0IIM8 1120 aa20.75■□□□□ 0.91
VPS16-204ENST00000417508 TARBP2Q15633 366 aaKnown RBP20.75■□□□□ 0.91
VPS16-204ENST00000417508 GADD45GIP1Q8TAE8 222 aaPredicted RBP20.75■□□□□ 0.91
VPS16-204ENST00000417508 ETNPPLQ8TBG4 499 aa20.75■□□□□ 0.91
VPS16-204ENST00000417508 FAM20AQ96MK3 541 aa20.75■□□□□ 0.91
VPS16-204ENST00000417508 ADAMTS10Q9H324 1103 aa20.75■□□□□ 0.91
VPS16-204ENST00000417508 DDX25Q9UHL0 483 aaKnown RBP20.75■□□□□ 0.91
VPS16-204ENST00000417508 TPCN1Q9ULQ1 816 aa20.75■□□□□ 0.91
VPS16-204ENST00000417508 EIF4BP23588 611 aaKnown RBP20.74■□□□□ 0.91
VPS16-204ENST00000417508 CLCN3P51790 818 aa20.74■□□□□ 0.91
VPS16-204ENST00000417508 INF2Q27J81 1249 aa20.74■□□□□ 0.91
VPS16-204ENST00000417508 PPP4R3AQ6IN85 833 aa20.74■□□□□ 0.91
VPS16-204ENST00000417508 FAM228AQ86W67 206 aa20.74■□□□□ 0.91
VPS16-204ENST00000417508 PPP2R3CQ969Q6 453 aa20.74■□□□□ 0.91
VPS16-204ENST00000417508 C1QTNF1Q9BXJ1 281 aa20.74■□□□□ 0.91
VPS16-204ENST00000417508 AAASQ9NRG9 546 aa20.74■□□□□ 0.91
VPS16-204ENST00000417508 TMEM161AQ9NX61 479 aa20.74■□□□□ 0.91
VPS16-204ENST00000417508 KCNJ14Q9UNX9 436 aa20.74■□□□□ 0.91
VPS16-204ENST00000417508 FAM50BQ9Y247 325 aa20.74■□□□□ 0.91
VPS16-204ENST00000417508 ZSCAN20P17040 1043 aaPredicted RBP20.73■□□□□ 0.91
VPS16-204ENST00000417508 DNM2P50570 870 aa20.73■□□□□ 0.91
VPS16-204ENST00000417508 DSC3Q14574 896 aa20.73■□□□□ 0.91
VPS16-204ENST00000417508 UGCGQ16739 394 aa20.73■□□□□ 0.91
VPS16-204ENST00000417508 NEK8Q86SG6 692 aa20.73■□□□□ 0.91
VPS16-204ENST00000417508 SPPL3Q8TCT6 385 aa20.73■□□□□ 0.91
VPS16-204ENST00000417508 ATP6V0A4Q9HBG4 840 aa20.73■□□□□ 0.91
VPS16-204ENST00000417508 PCDHB12Q9Y5F1 795 aa20.73■□□□□ 0.91
VPS16-204ENST00000417508 GRXCR2A6NFK2 248 aa20.72■□□□□ 0.91
VPS16-204ENST00000417508 TBX3O15119 743 aa20.72■□□□□ 0.91
VPS16-204ENST00000417508 HOXA2O43364 376 aa20.72■□□□□ 0.91
VPS16-204ENST00000417508 DKC1O60832 514 aaKnown RBP eCLIP20.72■□□□□ 0.91
VPS16-204ENST00000417508 PSMC5P62195 406 aa20.72■□□□□ 0.91
VPS16-204ENST00000417508 CSPP1Q1MSJ5 1256 aa20.72■□□□□ 0.91
VPS16-204ENST00000417508 CTC1Q2NKJ3 1217 aa20.72■□□□□ 0.91
VPS16-204ENST00000417508 LETM2Q2VYF4 491 aa20.72■□□□□ 0.91
VPS16-204ENST00000417508 PAN2Q504Q3 1202 aaKnown RBP20.72■□□□□ 0.91
VPS16-204ENST00000417508 PTCRAQ6ISU1 281 aaPredicted RBP20.72■□□□□ 0.91
VPS16-204ENST00000417508 FAM178BQ8IXR5 827 aa20.72■□□□□ 0.91
VPS16-204ENST00000417508 LRRC71Q8N4P6 559 aa20.72■□□□□ 0.91
VPS16-204ENST00000417508 KLHL23Q8NBE8 558 aa20.72■□□□□ 0.91
VPS16-204ENST00000417508 GJA10Q969M2 543 aa20.72■□□□□ 0.91
VPS16-204ENST00000417508 PPP1R16BQ96T49 567 aa20.72■□□□□ 0.91
VPS16-204ENST00000417508 JPH2Q9BR39 696 aaPredicted RBP20.72■□□□□ 0.91
VPS16-204ENST00000417508 ALG13Q9NP73 1137 aaKnown RBP20.72■□□□□ 0.91
VPS16-204ENST00000417508 ORC3Q9UBD5 711 aaPredicted RBP20.72■□□□□ 0.91
VPS16-204ENST00000417508 FNDC1Q4ZHG4 1894 aaPredicted RBP20.72■□□□□ 0.91
VPS16-204ENST00000417508 STBD1O95210 358 aa20.71■□□□□ 0.91
VPS16-204ENST00000417508 ITGB1P05556 798 aa20.71■□□□□ 0.91
VPS16-204ENST00000417508 DARSP14868 501 aaKnown RBP20.71■□□□□ 0.91
VPS16-204ENST00000417508 GPC3P51654 580 aa20.71■□□□□ 0.91
VPS16-204ENST00000417508 AK2P54819 239 aa20.71■□□□□ 0.91
VPS16-204ENST00000417508 UBE3AQ05086 875 aa20.71■□□□□ 0.91
VPS16-204ENST00000417508 PPP2R5CQ13362 524 aa20.71■□□□□ 0.91
VPS16-204ENST00000417508 EXOC8Q8IYI6 725 aa20.71■□□□□ 0.91
VPS16-204ENST00000417508 KCNMB3Q9NPA1 279 aa20.71■□□□□ 0.91
VPS16-204ENST00000417508 CLDND1Q9NY35 253 aa20.71■□□□□ 0.91
VPS16-204ENST00000417508 IGKV6-21A0A0C4DH24 114 aa20.7■□□□□ 0.9
VPS16-204ENST00000417508 TBKBP1A7MCY6 615 aa20.7■□□□□ 0.9
VPS16-204ENST00000417508 CAMK1Q14012 370 aa20.7■□□□□ 0.9
VPS16-204ENST00000417508 SPOUT1Q5T280 376 aaKnown RBP20.7■□□□□ 0.9
VPS16-204ENST00000417508 FAM102BQ5T8I3 360 aa20.7■□□□□ 0.9
VPS16-204ENST00000417508 EP400NLQ6ZTU2 488 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms