RNA–Protein interactions for RNA: ENST00000417033.1

MDC1-203, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 916 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-203ENST00000417033 ARSHQ5FYA8 562 aa8.99□□□□□ -0.97
MDC1-203ENST00000417033 MAEAQ7L5Y9 396 aa8.99□□□□□ -0.97
MDC1-203ENST00000417033 SH3RF1Q7Z6J0 888 aa8.99□□□□□ -0.97
MDC1-203ENST00000417033 GPBP1Q86WP2 473 aa8.99□□□□□ -0.97
MDC1-203ENST00000417033 CNNM3Q8NE01 707 aa8.99□□□□□ -0.97
MDC1-203ENST00000417033 LMBR1Q8WVP7 490 aa8.99□□□□□ -0.97
MDC1-203ENST00000417033 PAGE5Q96GU1 130 aa8.99□□□□□ -0.97
MDC1-203ENST00000417033 CEP170P1Q96L14 293 aa8.99□□□□□ -0.97
MDC1-203ENST00000417033 NACC1Q96RE7 527 aa8.99□□□□□ -0.97
MDC1-203ENST00000417033 NT5C3AQ9H0P0 336 aa8.99□□□□□ -0.97
MDC1-203ENST00000417033 GPRC5CQ9NQ84 441 aa8.99□□□□□ -0.97
MDC1-203ENST00000417033 CYP26B1Q9NR63 512 aa8.99□□□□□ -0.97
MDC1-203ENST00000417033 ANKEF1Q9NU02 776 aa8.99□□□□□ -0.97
MDC1-203ENST00000417033 SETD4Q9NVD3 440 aa8.99□□□□□ -0.97
MDC1-203ENST00000417033 ERAP1Q9NZ08 941 aa8.99□□□□□ -0.97
MDC1-203ENST00000417033 TMEM63CQ9P1W3 806 aa8.99□□□□□ -0.97
MDC1-203ENST00000417033 HDAC6Q9UBN7 1215 aa8.99□□□□□ -0.97
MDC1-203ENST00000417033 STK17AQ9UEE5 414 aa8.99□□□□□ -0.97
MDC1-203ENST00000417033 ZNF215Q9UL58 517 aaPredicted RBP8.99□□□□□ -0.97
MDC1-203ENST00000417033 PHF24Q9UPV7 400 aa8.99□□□□□ -0.97
MDC1-203ENST00000417033 DNM3Q9UQ16 869 aa8.99□□□□□ -0.97
MDC1-203ENST00000417033 PCNTO95613 3336 aa8.99□□□□□ -0.97
MDC1-203ENST00000417033 HTTP42858 3142 aa8.98□□□□□ -0.97
MDC1-203ENST00000417033 ARHGEF35A5YM69 484 aa8.98□□□□□ -0.97
MDC1-203ENST00000417033 KBTBD13C9JR72 458 aa8.98□□□□□ -0.97
MDC1-203ENST00000417033 DNM1LO00429 736 aa8.98□□□□□ -0.97
MDC1-203ENST00000417033 ZEB2O60315 1214 aa8.98□□□□□ -0.97
MDC1-203ENST00000417033 HBP1O60381 514 aa8.98□□□□□ -0.97
MDC1-203ENST00000417033 KINO60870 393 aaKnown RBP8.98□□□□□ -0.97
MDC1-203ENST00000417033 C22orf31O95567 290 aa8.98□□□□□ -0.97
MDC1-203ENST00000417033 TFRCP02786 760 aaKnown RBP8.98□□□□□ -0.97
MDC1-203ENST00000417033 SLFN14P0C7P3 912 aa8.98□□□□□ -0.97
MDC1-203ENST00000417033 MUTP22033 750 aa8.98□□□□□ -0.97
MDC1-203ENST00000417033 GJA8P48165 433 aa8.98□□□□□ -0.97
MDC1-203ENST00000417033 PPFIA1Q13136 1202 aa8.98□□□□□ -0.97
MDC1-203ENST00000417033 MAPK7Q13164 816 aa8.98□□□□□ -0.97
MDC1-203ENST00000417033 CUL4BQ13620 913 aa8.98□□□□□ -0.97
MDC1-203ENST00000417033 GRIK4Q16099 956 aa8.98□□□□□ -0.97
MDC1-203ENST00000417033 BRDTQ58F21 947 aaPredicted RBP8.98□□□□□ -0.97
MDC1-203ENST00000417033 MARCH8Q5T0T0 291 aa8.98□□□□□ -0.97
MDC1-203ENST00000417033 RINT1Q6NUQ1 792 aa8.98□□□□□ -0.97
MDC1-203ENST00000417033 CAVIN1Q6NZI2 390 aaKnown RBP8.98□□□□□ -0.97
MDC1-203ENST00000417033 PADI6Q6TGC4 694 aa8.98□□□□□ -0.97
MDC1-203ENST00000417033 RUFY4Q6ZNE9 571 aa8.98□□□□□ -0.97
MDC1-203ENST00000417033 C1orf186Q6ZWK4 172 aa8.98□□□□□ -0.97
MDC1-203ENST00000417033 DYMQ7RTS9 669 aa8.98□□□□□ -0.97
MDC1-203ENST00000417033 DAW1Q8N136 415 aa8.98□□□□□ -0.97
MDC1-203ENST00000417033 LRRC71Q8N4P6 559 aa8.98□□□□□ -0.97
MDC1-203ENST00000417033 SYT2Q8N9I0 419 aaPredicted RBP8.98□□□□□ -0.97
MDC1-203ENST00000417033 IQUBQ8NA54 791 aa8.98□□□□□ -0.97
MDC1-203ENST00000417033 PCSK9Q8NBP7 692 aaKnown RBP8.98□□□□□ -0.97
MDC1-203ENST00000417033 ARRDC4Q8NCT1 418 aa8.98□□□□□ -0.97
MDC1-203ENST00000417033 WNT8BQ93098 351 aa8.98□□□□□ -0.97
MDC1-203ENST00000417033 ZNF668Q96K58 619 aaPredicted RBP8.98□□□□□ -0.97
MDC1-203ENST00000417033 FAM167AQ96KS9 214 aa8.98□□□□□ -0.97
MDC1-203ENST00000417033 CTAGE1Q96RT6 745 aa8.98□□□□□ -0.97
MDC1-203ENST00000417033 NIFKQ9BYG3 293 aaKnown RBP8.98□□□□□ -0.97
MDC1-203ENST00000417033 CLSTN2Q9H4D0 955 aa8.98□□□□□ -0.97
MDC1-203ENST00000417033 KBTBD4Q9NVX7 518 aa8.98□□□□□ -0.97
MDC1-203ENST00000417033 DBR1Q9UK59 544 aaKnown RBP8.98□□□□□ -0.97
MDC1-203ENST00000417033 MYH9P35579 1960 aaKnown RBP8.98□□□□□ -0.97
MDC1-203ENST00000417033 ARID2Q68CP9 1835 aa8.98□□□□□ -0.97
MDC1-203ENST00000417033 MOXD2PA6NHM9 499 aa8.97□□□□□ -0.97
MDC1-203ENST00000417033 TRAK2O60296 914 aa8.97□□□□□ -0.97
MDC1-203ENST00000417033 KPNA6O60684 536 aa8.97□□□□□ -0.97
MDC1-203ENST00000417033 DKC1O60832 514 aaKnown RBP eCLIP8.97□□□□□ -0.97
MDC1-203ENST00000417033 MBD3O95983 291 aa8.97□□□□□ -0.97
MDC1-203ENST00000417033 EN2P19622 333 aaPredicted RBP8.97□□□□□ -0.97
MDC1-203ENST00000417033 HOXC8P31273 242 aa8.97□□□□□ -0.97
MDC1-203ENST00000417033 SLC26A2P50443 739 aa8.97□□□□□ -0.97
MDC1-203ENST00000417033 CLCN3P51790 818 aa8.97□□□□□ -0.97
MDC1-203ENST00000417033 ADAM17P78536 824 aa8.97□□□□□ -0.97
MDC1-203ENST00000417033 MDM2Q00987 491 aaPredicted RBP8.97□□□□□ -0.97
MDC1-203ENST00000417033 ITGA7Q13683 1181 aa8.97□□□□□ -0.97
MDC1-203ENST00000417033 EMC2Q15006 297 aa8.97□□□□□ -0.97
MDC1-203ENST00000417033 FAM47CQ5HY64 1035 aa8.97□□□□□ -0.97
MDC1-203ENST00000417033 GDF6Q6KF10 455 aaPredicted RBP8.97□□□□□ -0.97
MDC1-203ENST00000417033 SV2BQ7L1I2 683 aa8.97□□□□□ -0.97
MDC1-203ENST00000417033 CEP57L1Q8IYX8 460 aa8.97□□□□□ -0.97
MDC1-203ENST00000417033 TNS4Q8IZW8 715 aa8.97□□□□□ -0.97
MDC1-203ENST00000417033 ASAP3Q8TDY4 903 aa8.97□□□□□ -0.97
MDC1-203ENST00000417033 BSNDQ8WZ55 320 aa8.97□□□□□ -0.97
MDC1-203ENST00000417033 DDX12PQ92771 950 aa8.97□□□□□ -0.97
MDC1-203ENST00000417033 HPS3Q969F9 1004 aa8.97□□□□□ -0.97
MDC1-203ENST00000417033 VTI1AQ96AJ9 217 aa8.97□□□□□ -0.97
MDC1-203ENST00000417033 TMEM143Q96AN5 459 aa8.97□□□□□ -0.97
MDC1-203ENST00000417033 DNAJC19Q96DA6 116 aa8.97□□□□□ -0.97
MDC1-203ENST00000417033 PPP1R16BQ96T49 567 aa8.97□□□□□ -0.97
MDC1-203ENST00000417033 REEP2Q9BRK0 252 aa8.97□□□□□ -0.97
MDC1-203ENST00000417033 TSEN34Q9BSV6 310 aaKnown RBP8.97□□□□□ -0.97
MDC1-203ENST00000417033 FGFBP2Q9BYJ0 223 aa8.97□□□□□ -0.97
MDC1-203ENST00000417033 TRIM9Q9C026 710 aa8.97□□□□□ -0.97
MDC1-203ENST00000417033 NUP62CLQ9H1M0 184 aa8.97□□□□□ -0.97
MDC1-203ENST00000417033 DHX33Q9H6R0 707 aaKnown RBP8.97□□□□□ -0.97
MDC1-203ENST00000417033 STARD7Q9NQZ5 370 aa8.97□□□□□ -0.97
MDC1-203ENST00000417033 PDLIM7Q9NR12 457 aa8.97□□□□□ -0.97
MDC1-203ENST00000417033 NRBP2Q9NSY0 501 aa8.97□□□□□ -0.97
MDC1-203ENST00000417033 C17orf102A2RUQ5 167 aa8.96□□□□□ -0.98
MDC1-203ENST00000417033 SFI1A8K8P3 1242 aa8.96□□□□□ -0.98
MDC1-203ENST00000417033 TULP1O00294 542 aaPredicted RBP8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms