RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 P4HBP07237 508 aaKnown RBP16.84■□□□□ 0.29
PHRF1-203ENST00000416188 GCLCP48506 637 aaPredicted RBP16.84■□□□□ 0.29
PHRF1-203ENST00000416188 PADI6Q6TGC4 694 aa16.84■□□□□ 0.29
PHRF1-203ENST00000416188 FAM133AQ8N9E0 248 aa16.84■□□□□ 0.29
PHRF1-203ENST00000416188 CHST13Q8NET6 341 aa16.84■□□□□ 0.29
PHRF1-203ENST00000416188 DYDC2Q96IM9 177 aa16.84■□□□□ 0.29
PHRF1-203ENST00000416188 BARHL2Q9NY43 387 aa16.84■□□□□ 0.29
PHRF1-203ENST00000416188 CPA4Q9UI42 421 aa16.84■□□□□ 0.29
PHRF1-203ENST00000416188 SFI1A8K8P3 1242 aa16.84■□□□□ 0.29
PHRF1-203ENST00000416188 CTSHP09668 335 aa16.84■□□□□ 0.29
PHRF1-203ENST00000416188 SAT1P21673 171 aa16.84■□□□□ 0.29
PHRF1-203ENST00000416188 CCNE1P24864 410 aa16.84■□□□□ 0.29
PHRF1-203ENST00000416188 RCAN1P53805 252 aa16.84■□□□□ 0.29
PHRF1-203ENST00000416188 ALCAMQ13740 583 aa16.84■□□□□ 0.29
PHRF1-203ENST00000416188 PDZD4Q76G19 769 aaPredicted RBP16.84■□□□□ 0.29
PHRF1-203ENST00000416188 JPH1Q9HDC5 661 aaPredicted RBP16.84■□□□□ 0.29
PHRF1-203ENST00000416188 DEPDC5O75140 1603 aa16.84■□□□□ 0.29
PHRF1-203ENST00000416188 CLDN3O15551 220 aa16.84■□□□□ 0.29
PHRF1-203ENST00000416188 CXCR5P32302 372 aa16.84■□□□□ 0.29
PHRF1-203ENST00000416188 STAT5BP51692 787 aa16.84■□□□□ 0.29
PHRF1-203ENST00000416188 RPS6KA2Q15349 733 aa16.84■□□□□ 0.29
PHRF1-203ENST00000416188 ELMOD1Q8N336 334 aa16.84■□□□□ 0.29
PHRF1-203ENST00000416188 LRRC4Q9HBW1 653 aa16.84■□□□□ 0.29
PHRF1-203ENST00000416188 POTEMA6NI47 508 aa16.83■□□□□ 0.29
PHRF1-203ENST00000416188 ADM5C9JUS6 153 aa16.83■□□□□ 0.29
PHRF1-203ENST00000416188 RASSF2P50749 326 aa16.83■□□□□ 0.29
PHRF1-203ENST00000416188 TNFAIP2Q03169 654 aa16.83■□□□□ 0.29
PHRF1-203ENST00000416188 NFIAQ12857 509 aa16.83■□□□□ 0.29
PHRF1-203ENST00000416188 PPP4R1Q8TF05 950 aa16.83■□□□□ 0.29
PHRF1-203ENST00000416188 MANSC4A6NHS7 340 aaPredicted RBP16.83■□□□□ 0.29
PHRF1-203ENST00000416188 SOWAHDA6NJG2 315 aa16.83■□□□□ 0.29
PHRF1-203ENST00000416188 PSMC5P62195 406 aa16.83■□□□□ 0.29
PHRF1-203ENST00000416188 ZNF568Q3ZCX4 644 aa16.83■□□□□ 0.29
PHRF1-203ENST00000416188 CYFIP1Q7L576 1253 aa16.83■□□□□ 0.29
PHRF1-203ENST00000416188 MED4Q9NPJ6 270 aa16.83■□□□□ 0.29
PHRF1-203ENST00000416188 PCDHA10Q9Y5I2 948 aa16.83■□□□□ 0.29
PHRF1-203ENST00000416188 PHLPP2Q6ZVD8 1323 aa16.83■□□□□ 0.28
PHRF1-203ENST00000416188 GFPT2O94808 682 aa16.83■□□□□ 0.28
PHRF1-203ENST00000416188 ATP1A3P13637 1013 aa16.83■□□□□ 0.28
PHRF1-203ENST00000416188 CLNS1AP54105 237 aaKnown RBP16.83■□□□□ 0.28
PHRF1-203ENST00000416188 YWHAGP61981 247 aaKnown RBP eCLIP16.83■□□□□ 0.284e-6■■■■□ 21.1
PHRF1-203ENST00000416188 TTC19Q6DKK2 380 aaPredicted RBP16.83■□□□□ 0.28
PHRF1-203ENST00000416188 THEM5Q8N1Q8 247 aa16.83■□□□□ 0.28
PHRF1-203ENST00000416188 NEK9Q8TD19 979 aa16.83■□□□□ 0.28
PHRF1-203ENST00000416188 PAGE5Q96GU1 130 aa16.83■□□□□ 0.28
PHRF1-203ENST00000416188 TACO1Q9BSH4 297 aaKnown RBP16.83■□□□□ 0.28
PHRF1-203ENST00000416188 RWDD2AQ9UIY3 292 aa16.83■□□□□ 0.28
PHRF1-203ENST00000416188 WDR19Q8NEZ3 1342 aa16.83■□□□□ 0.28
PHRF1-203ENST00000416188 SEC31AO94979 1220 aaKnown RBP16.83■□□□□ 0.28
PHRF1-203ENST00000416188 NR3C2P08235 984 aa16.83■□□□□ 0.28
PHRF1-203ENST00000416188 ARL6IP4Q66PJ3 421 aaKnown RBP16.83■□□□□ 0.28
PHRF1-203ENST00000416188 PLEKHH3Q7Z736 793 aa16.83■□□□□ 0.28
PHRF1-203ENST00000416188 TXNRD3Q86VQ6 643 aa16.83■□□□□ 0.28
PHRF1-203ENST00000416188 DPF3Q92784 378 aa16.83■□□□□ 0.28
PHRF1-203ENST00000416188 VWDEQ8N2E2 1590 aa16.83■□□□□ 0.28
PHRF1-203ENST00000416188 GOLGA8IPA6NC78 632 aa16.83■□□□□ 0.28
PHRF1-203ENST00000416188 GOLGA8JA6NMD2 632 aa16.83■□□□□ 0.28
PHRF1-203ENST00000416188 POC1B-GALNT4F8VUJ3 575 aa16.83■□□□□ 0.28
PHRF1-203ENST00000416188 RASA1P20936 1047 aa16.83■□□□□ 0.28
PHRF1-203ENST00000416188 MAP7D3Q8IWC1 876 aa16.83■□□□□ 0.28
PHRF1-203ENST00000416188 AKT1S1Q96B36 256 aa16.83■□□□□ 0.28
PHRF1-203ENST00000416188 GDAQ9Y2T3 454 aa16.83■□□□□ 0.28
PHRF1-203ENST00000416188 CAPN7Q9Y6W3 813 aa16.83■□□□□ 0.28
PHRF1-203ENST00000416188 GOLGA8SH3BPF8 625 aa16.82■□□□□ 0.28
PHRF1-203ENST00000416188 MYL1P05976 194 aa16.82■□□□□ 0.28
PHRF1-203ENST00000416188 MAPK4P31152 587 aa16.82■□□□□ 0.28
PHRF1-203ENST00000416188 CYP27A1Q02318 531 aa16.82■□□□□ 0.28
PHRF1-203ENST00000416188 ARMCX2Q7L311 632 aa16.82■□□□□ 0.28
PHRF1-203ENST00000416188 HEXIM1O94992 359 aaKnown RBP16.82■□□□□ 0.28
PHRF1-203ENST00000416188 FTCDO95954 541 aa16.82■□□□□ 0.28
PHRF1-203ENST00000416188 CEP55Q53EZ4 464 aa16.82■□□□□ 0.28
PHRF1-203ENST00000416188 CCDC170Q8IYT3 715 aa16.82■□□□□ 0.28
PHRF1-203ENST00000416188 EPB41L5Q9HCM4 733 aa16.82■□□□□ 0.28
PHRF1-203ENST00000416188 SPTLC3Q9NUV7 552 aa16.82■□□□□ 0.28
PHRF1-203ENST00000416188 GCNT4Q9P109 453 aa16.82■□□□□ 0.28
PHRF1-203ENST00000416188 ARHGAP42A6NI28 874 aa16.82■□□□□ 0.28
PHRF1-203ENST00000416188 ZNF233A6NK53 670 aa16.82■□□□□ 0.28
PHRF1-203ENST00000416188 BBOF1Q8ND07 529 aa16.82■□□□□ 0.28
PHRF1-203ENST00000416188 FAM71BQ8TC56 605 aa16.82■□□□□ 0.28
PHRF1-203ENST00000416188 C2orf40Q9H1Z8 148 aa16.82■□□□□ 0.28
PHRF1-203ENST00000416188 A6NJR5 290 aa16.82■□□□□ 0.28
PHRF1-203ENST00000416188 SPDYE16A6NNV3 312 aaPredicted RBP16.82■□□□□ 0.28
PHRF1-203ENST00000416188 XPAP23025 273 aaPredicted RBP16.82■□□□□ 0.28
PHRF1-203ENST00000416188 EIF4A3P38919 411 aaKnown RBP16.82■□□□□ 0.28
PHRF1-203ENST00000416188 RFX5P48382 616 aaPredicted RBP16.82■□□□□ 0.28
PHRF1-203ENST00000416188 IFNAR2P48551 515 aa16.82■□□□□ 0.28
PHRF1-203ENST00000416188 SPDYE2Q495Y8 402 aa16.82■□□□□ 0.28
PHRF1-203ENST00000416188 NXNQ6DKJ4 435 aa16.82■□□□□ 0.28
PHRF1-203ENST00000416188 FAM117BQ6P1L5 589 aa16.82■□□□□ 0.28
PHRF1-203ENST00000416188 C3orf67Q6ZVT6 689 aa16.82■□□□□ 0.28
PHRF1-203ENST00000416188 SLC12A6Q9UHW9 1150 aa16.82■□□□□ 0.28
PHRF1-203ENST00000416188 TRPA1O75762 1119 aa16.81■□□□□ 0.28
PHRF1-203ENST00000416188 LDHAP00338 332 aaKnown RBP16.81■□□□□ 0.28
PHRF1-203ENST00000416188 CCDC38Q502W7 563 aa16.81■□□□□ 0.28
PHRF1-203ENST00000416188 KIF9Q9HAQ2 790 aa16.81■□□□□ 0.28
PHRF1-203ENST00000416188 DAAM1Q9Y4D1 1078 aa16.81■□□□□ 0.28
PHRF1-203ENST00000416188 KIAA1210Q9ULL0 1709 aa16.81■□□□□ 0.28
PHRF1-203ENST00000416188 PXDNQ92626 1479 aa16.81■□□□□ 0.28
PHRF1-203ENST00000416188 ZBED6P86452 979 aa16.81■□□□□ 0.28
PHRF1-203ENST00000416188 VSTM4Q8IW00 320 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms