RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 GOLGA8MH3BSY2 632 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 PSMD14O00487 310 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 POLR2MP0CAP2 368 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 KCNJ1P48048 391 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 ITKQ08881 620 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 CUL1Q13616 776 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 SLFN12Q8IYM2 578 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 PAGR1Q9BTK6 254 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 CALN1Q9BXU9 219 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 EPN3Q9H201 632 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 ETNK1Q9HBU6 452 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 CEP72Q9P209 647 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 PCDHB4Q9Y5E5 795 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 TARSL2A2RTX5 802 aaKnown RBP13.87□□□□□ -0.19
SCN1B-202ENST00000415950 ZNF18P17022 549 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 NTRK3Q16288 839 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 SESTD1Q86VW0 696 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 DACT3Q96B18 629 aaPredicted RBP13.87□□□□□ -0.19
SCN1B-202ENST00000415950 FAM149B1Q96BN6 582 aa13.87□□□□□ -0.19
SCN1B-202ENST00000415950 ADGRB3O60242 1522 aa13.86□□□□□ -0.19
SCN1B-202ENST00000415950 WDR17Q8IZU2 1322 aa13.86□□□□□ -0.19
SCN1B-202ENST00000415950 TCP10L2B9ZVM9 353 aa13.86□□□□□ -0.19
SCN1B-202ENST00000415950 EAPPQ56P03 285 aaPredicted RBP13.86□□□□□ -0.19
SCN1B-202ENST00000415950 FAM118BQ9BPY3 351 aa13.86□□□□□ -0.19
SCN1B-202ENST00000415950 ALG13Q9NP73 1137 aaKnown RBP13.86□□□□□ -0.19
SCN1B-202ENST00000415950 SERPINB13Q9UIV8 391 aa13.86□□□□□ -0.19
SCN1B-202ENST00000415950 ANKARQ7Z5J8 1434 aa13.86□□□□□ -0.19
SCN1B-202ENST00000415950 PCP11498 1178 aaKnown RBP13.86□□□□□ -0.19
SCN1B-202ENST00000415950 GLE1Q53GS7 698 aaKnown RBP13.86□□□□□ -0.19
SCN1B-202ENST00000415950 ARHGEF16Q5VV41 709 aa13.86□□□□□ -0.19
SCN1B-202ENST00000415950 PDXDC1Q6P996 788 aa13.86□□□□□ -0.19
SCN1B-202ENST00000415950 TRAPPC11Q7Z392 1133 aa13.86□□□□□ -0.19
SCN1B-202ENST00000415950 C1orf54Q8WWF1 131 aa13.86□□□□□ -0.19
SCN1B-202ENST00000415950 HDAC11Q96DB2 347 aa13.86□□□□□ -0.19
SCN1B-202ENST00000415950 CHMP6Q96FZ7 201 aa13.86□□□□□ -0.19
SCN1B-202ENST00000415950 Q9H521 79 aa13.86□□□□□ -0.19
SCN1B-202ENST00000415950 VIPAS39Q9H9C1 493 aa13.86□□□□□ -0.19
SCN1B-202ENST00000415950 HESX1Q9UBX0 185 aa13.86□□□□□ -0.19
SCN1B-202ENST00000415950 IVNS1ABPQ9Y6Y0 642 aa13.86□□□□□ -0.19
SCN1B-202ENST00000415950 WDR19Q8NEZ3 1342 aa13.86□□□□□ -0.19
SCN1B-202ENST00000415950 MT-ND3P03897 115 aa13.86□□□□□ -0.19
SCN1B-202ENST00000415950 RFX6Q8HWS3 928 aa13.86□□□□□ -0.19
SCN1B-202ENST00000415950 NSMCE1Q8WV22 266 aa13.86□□□□□ -0.19
SCN1B-202ENST00000415950 XPO5Q9HAV4 1204 aaKnown RBP eCLIP13.86□□□□□ -0.19
SCN1B-202ENST00000415950 PCDHA6Q9UN73 950 aa13.86□□□□□ -0.19
SCN1B-202ENST00000415950 PCDHA8Q9Y5H6 950 aa13.86□□□□□ -0.19
SCN1B-202ENST00000415950 USP31Q70CQ4 1352 aa13.86□□□□□ -0.19
SCN1B-202ENST00000415950 A0A0G2JND7 137 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 DIAPH2O60879 1101 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 BRAFP15056 766 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 POLR2BP30876 1174 aaKnown RBP13.85□□□□□ -0.19
SCN1B-202ENST00000415950 CASP2P42575 452 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 ECE1P42892 770 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 HERVK_113P62684 666 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 C4orf50Q6ZRC1 276 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 RAPH1Q70E73 1250 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 NLRP7Q8WX94 980 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 ANLNQ9NQW6 1124 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 NPHP4O75161 1426 aaPredicted RBP13.85□□□□□ -0.19
SCN1B-202ENST00000415950 A0A087X0T9 212 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 USP17L10C9JJH3 530 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 SKAP2O75563 359 aaPredicted RBP13.85□□□□□ -0.19
SCN1B-202ENST00000415950 TOM1L1O75674 476 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 FAM228BP0C875 321 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 MYLK4Q86YV6 388 aaPredicted RBP13.85□□□□□ -0.19
SCN1B-202ENST00000415950 BBOF1Q8ND07 529 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 BRIP1Q9BX63 1249 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 PACSIN1Q9BY11 444 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 SPDYE16A6NNV3 312 aaPredicted RBP13.85□□□□□ -0.19
SCN1B-202ENST00000415950 WDR46O15213 610 aaKnown RBP13.85□□□□□ -0.19
SCN1B-202ENST00000415950 SPAG7O75391 227 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 MYBL1P10243 752 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 ESRRAP11474 423 aaPredicted RBP13.85□□□□□ -0.19
SCN1B-202ENST00000415950 PMS2P54278 862 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 GRAMD1BQ3KR37 738 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 SPDYE2Q495Y8 402 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 ZNF394Q53GI3 561 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 GUF1Q8N442 669 aaKnown RBP13.85□□□□□ -0.19
SCN1B-202ENST00000415950 FAM84BQ96KN1 310 aaPredicted RBP13.85□□□□□ -0.19
SCN1B-202ENST00000415950 PRMT1Q99873 361 aaKnown RBP13.85□□□□□ -0.19
SCN1B-202ENST00000415950 SCOCQ9UIL1 159 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 TMEM94Q12767 1356 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 CCDC188H7C350 402 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 GLI1P08151 1106 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 VEGFAP15692 232 aaPredicted RBP13.85□□□□□ -0.19
SCN1B-202ENST00000415950 PIK3CAP42336 1068 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 IGBP1P78318 339 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 DRAP1Q14919 205 aaPredicted RBP13.85□□□□□ -0.19
SCN1B-202ENST00000415950 AOC3Q16853 763 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 GJB7Q6PEY0 223 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 TEKT3Q9BXF9 490 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 AMNQ9BXJ7 453 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 CNOT10Q9H9A5 744 aaKnown RBP13.85□□□□□ -0.19
SCN1B-202ENST00000415950 NOP53Q9NZM5 478 aaKnown RBP13.85□□□□□ -0.19
SCN1B-202ENST00000415950 INPP5FQ9Y2H2 1132 aa13.85□□□□□ -0.19
SCN1B-202ENST00000415950 INO80Q9ULG1 1556 aaPredicted RBP13.85□□□□□ -0.19
SCN1B-202ENST00000415950 MGEA5O60502 916 aa13.84□□□□□ -0.19
SCN1B-202ENST00000415950 MFAP3P55082 362 aa13.84□□□□□ -0.19
SCN1B-202ENST00000415950 DMP1Q13316 513 aaPredicted RBP13.84□□□□□ -0.19
SCN1B-202ENST00000415950 CCNYQ8ND76 341 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms