RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 CHRNA1P02708 482 aa16.32■□□□□ 0.2
LIMS1-206ENST00000414829 SPATA31C1P0DKV0 1188 aa16.32■□□□□ 0.2
LIMS1-206ENST00000414829 ACRP10323 421 aa16.32■□□□□ 0.2
LIMS1-206ENST00000414829 RARRES1P49788 294 aa16.32■□□□□ 0.2
LIMS1-206ENST00000414829 CLCN3P51790 818 aa16.32■□□□□ 0.2
LIMS1-206ENST00000414829 CRYBB1P53674 252 aaPredicted RBP16.32■□□□□ 0.2
LIMS1-206ENST00000414829 EPHB4P54760 987 aa16.32■□□□□ 0.2
LIMS1-206ENST00000414829 EMC2Q15006 297 aa16.32■□□□□ 0.2
LIMS1-206ENST00000414829 PLEKHG4Q58EX7 1191 aa16.32■□□□□ 0.2
LIMS1-206ENST00000414829 FBXO47Q5MNV8 452 aa16.32■□□□□ 0.2
LIMS1-206ENST00000414829 PLA2G4FQ68DD2 849 aa16.32■□□□□ 0.2
LIMS1-206ENST00000414829 ZNF410Q86VK4 478 aa16.32■□□□□ 0.2
LIMS1-206ENST00000414829 LINC01465Q8N7H1 131 aa16.32■□□□□ 0.2
LIMS1-206ENST00000414829 SPRYD3Q8NCJ5 442 aa16.32■□□□□ 0.2
LIMS1-206ENST00000414829 SLC9A7Q96T83 725 aa16.32■□□□□ 0.2
LIMS1-206ENST00000414829 MTRQ99707 1265 aa16.32■□□□□ 0.2
LIMS1-206ENST00000414829 FTHL17Q9BXU8 183 aa16.32■□□□□ 0.2
LIMS1-206ENST00000414829 RNF216Q9NWF9 866 aaPredicted RBP16.32■□□□□ 0.2
LIMS1-206ENST00000414829 CFAP45Q9UL16 551 aa16.32■□□□□ 0.2
LIMS1-206ENST00000414829 DNM3Q9UQ16 869 aa16.32■□□□□ 0.2
LIMS1-206ENST00000414829 SLC4A7Q9Y6M7 1214 aa16.32■□□□□ 0.2
LIMS1-206ENST00000414829 ASAP2O43150 1006 aa16.31■□□□□ 0.2
LIMS1-206ENST00000414829 MED24O75448 989 aa16.31■□□□□ 0.2
LIMS1-206ENST00000414829 GHRP10912 638 aa16.31■□□□□ 0.2
LIMS1-206ENST00000414829 UBA7P41226 1012 aa16.31■□□□□ 0.2
LIMS1-206ENST00000414829 NASPP49321 788 aaPredicted RBP16.31■□□□□ 0.2
LIMS1-206ENST00000414829 SMAD3P84022 425 aaKnown RBP16.31■□□□□ 0.2
LIMS1-206ENST00000414829 PAK2Q13177 524 aa16.31■□□□□ 0.2
LIMS1-206ENST00000414829 MXD4Q14582 209 aaPredicted RBP16.31■□□□□ 0.2
LIMS1-206ENST00000414829 C9orf50Q5SZB4 431 aa16.31■□□□□ 0.2
LIMS1-206ENST00000414829 RASIP1Q5U651 963 aa16.31■□□□□ 0.2
LIMS1-206ENST00000414829 POTEGQ6S5H5 508 aa16.31■□□□□ 0.2
LIMS1-206ENST00000414829 OTOP2Q7RTS6 562 aa16.31■□□□□ 0.2
LIMS1-206ENST00000414829 LRRC71Q8N4P6 559 aa16.31■□□□□ 0.2
LIMS1-206ENST00000414829 RASSF8Q8NHQ8 419 aa16.31■□□□□ 0.2
LIMS1-206ENST00000414829 PHOSPHO2Q8TCD6 241 aa16.31■□□□□ 0.2
LIMS1-206ENST00000414829 KCNG4Q8TDN1 519 aa16.31■□□□□ 0.2
LIMS1-206ENST00000414829 CALML4Q96GE6 196 aa16.31■□□□□ 0.2
LIMS1-206ENST00000414829 CEP89Q96ST8 783 aa16.31■□□□□ 0.2
LIMS1-206ENST00000414829 INO80BQ9C086 356 aaPredicted RBP16.31■□□□□ 0.2
LIMS1-206ENST00000414829 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.3■□□□□ 0.2
LIMS1-206ENST00000414829 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.3■□□□□ 0.2
LIMS1-206ENST00000414829 GPR182O15218 404 aa16.3■□□□□ 0.2
LIMS1-206ENST00000414829 NPEPPSP55786 919 aa16.3■□□□□ 0.2
LIMS1-206ENST00000414829 NUCB2P80303 420 aa16.3■□□□□ 0.2
LIMS1-206ENST00000414829 TFDP1Q14186 410 aa16.3■□□□□ 0.2
LIMS1-206ENST00000414829 MBTPS1Q14703 1052 aa16.3■□□□□ 0.2
LIMS1-206ENST00000414829 SLC39A14Q15043 492 aa16.3■□□□□ 0.2
LIMS1-206ENST00000414829 STK38Q15208 465 aa16.3■□□□□ 0.2
LIMS1-206ENST00000414829 HYIQ5T013 277 aa16.3■□□□□ 0.2
LIMS1-206ENST00000414829 C16orf59Q7L2K0 433 aa16.3■□□□□ 0.2
LIMS1-206ENST00000414829 KRI1Q8N9T8 703 aaKnown RBP16.3■□□□□ 0.2
LIMS1-206ENST00000414829 NLRP7Q8WX94 980 aa16.3■□□□□ 0.2
LIMS1-206ENST00000414829 SUCLA2Q9P2R7 463 aaPredicted RBP16.3■□□□□ 0.2
LIMS1-206ENST00000414829 GINS2Q9Y248 185 aa16.3■□□□□ 0.2
LIMS1-206ENST00000414829 SRPRBQ9Y5M8 271 aaKnown RBP16.3■□□□□ 0.2
LIMS1-206ENST00000414829 CLIC4Q9Y696 253 aa16.3■□□□□ 0.2
LIMS1-206ENST00000414829 RANBP2P49792 3224 aaKnown RBP16.29■□□□□ 0.2
LIMS1-206ENST00000414829 TMEM150BA6NC51 233 aa16.29■□□□□ 0.2
LIMS1-206ENST00000414829 RPS6KA5O75582 802 aa16.29■□□□□ 0.2
LIMS1-206ENST00000414829 BRD1O95696 1058 aa16.29■□□□□ 0.2
LIMS1-206ENST00000414829 AMHP03971 560 aa16.29■□□□□ 0.2
LIMS1-206ENST00000414829 VTNP04004 478 aa16.29■□□□□ 0.2
LIMS1-206ENST00000414829 ATP2A2P16615 1042 aaKnown RBP16.29■□□□□ 0.2
LIMS1-206ENST00000414829 SFPQP23246 707 aaKnown RBP eCLIP16.29■□□□□ 0.2
LIMS1-206ENST00000414829 GPC3P51654 580 aa16.29■□□□□ 0.2
LIMS1-206ENST00000414829 NLRP11P59045 1033 aaKnown RBP16.29■□□□□ 0.2
LIMS1-206ENST00000414829 LPIN1Q14693 890 aa16.29■□□□□ 0.2
LIMS1-206ENST00000414829 PTPAQ15257 358 aa16.29■□□□□ 0.2
LIMS1-206ENST00000414829 PCBP1Q15365 356 aaKnown RBP eCLIP16.29■□□□□ 0.2
LIMS1-206ENST00000414829 RAB30Q15771 203 aa16.29■□□□□ 0.2
LIMS1-206ENST00000414829 KIZQ2M2Z5 673 aa16.29■□□□□ 0.2
LIMS1-206ENST00000414829 GPR153Q6NV75 609 aa16.29■□□□□ 0.2
LIMS1-206ENST00000414829 CABP7Q86V35 215 aa16.29■□□□□ 0.2
LIMS1-206ENST00000414829 DBF4BQ8NFT6 615 aa16.29■□□□□ 0.2
LIMS1-206ENST00000414829 PIGOQ8TEQ8 1089 aa16.29■□□□□ 0.2
LIMS1-206ENST00000414829 ZBTB10Q96DT7 871 aa16.29■□□□□ 0.2
LIMS1-206ENST00000414829 USP28Q96RU2 1077 aa16.29■□□□□ 0.2
LIMS1-206ENST00000414829 TIPINQ9BVW5 301 aa16.29■□□□□ 0.2
LIMS1-206ENST00000414829 GCOM2Q9BZD3 368 aaPredicted RBP16.29■□□□□ 0.2
LIMS1-206ENST00000414829 DDX19AQ9NUU7 478 aaKnown RBP16.29■□□□□ 0.2
LIMS1-206ENST00000414829 KIAA1024Q9UPX6 916 aa16.29■□□□□ 0.2
LIMS1-206ENST00000414829 COL4A3BPQ9Y5P4 624 aa16.29■□□□□ 0.2
LIMS1-206ENST00000414829 USO1O60763 962 aaKnown RBP16.28■□□□□ 0.2
LIMS1-206ENST00000414829 PPP6R2O75170 966 aa16.28■□□□□ 0.2
LIMS1-206ENST00000414829 GPR32O75388 356 aa16.28■□□□□ 0.2
LIMS1-206ENST00000414829 EYA4O95677 639 aa16.28■□□□□ 0.2
LIMS1-206ENST00000414829 EIF4BP23588 611 aaKnown RBP16.28■□□□□ 0.2
LIMS1-206ENST00000414829 TMEM62Q0P6H9 643 aa16.28■□□□□ 0.2
LIMS1-206ENST00000414829 GPNMBQ14956 572 aa16.28■□□□□ 0.2
LIMS1-206ENST00000414829 IL17AQ16552 155 aa16.28■□□□□ 0.2
LIMS1-206ENST00000414829 LINC00301Q8NCQ3 95 aa16.28■□□□□ 0.2
LIMS1-206ENST00000414829 KCND2Q9NZV8 630 aa16.28■□□□□ 0.2
LIMS1-206ENST00000414829 CCDC39Q9UFE4 941 aa16.28■□□□□ 0.2
LIMS1-206ENST00000414829 TMEM265A0A087WTH1 108 aa16.27■□□□□ 0.2
LIMS1-206ENST00000414829 SPTLC2O15270 562 aa16.27■□□□□ 0.2
LIMS1-206ENST00000414829 DARSP14868 501 aaKnown RBP16.27■□□□□ 0.2
LIMS1-206ENST00000414829 PHKA2P46019 1235 aa16.27■□□□□ 0.2
LIMS1-206ENST00000414829 WDR5P61964 334 aaKnown RBP16.27■□□□□ 0.2
LIMS1-206ENST00000414829 KRT85P78386 507 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms