RNA–Protein interactions for RNA: ENST00000413642.7

VEGFA-207, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,197 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-207ENST00000413642 SH2B1Q9NRF2 756 aaPredicted RBP29.57■■■□□ 2.32
VEGFA-207ENST00000413642 ST3GAL5Q9UNP4 418 aa29.57■■■□□ 2.32
VEGFA-207ENST00000413642 GTPBP6O43824 516 aaPredicted RBP29.56■■■□□ 2.32
VEGFA-207ENST00000413642 ATP2B1P20020 1258 aa29.56■■■□□ 2.32
VEGFA-207ENST00000413642 SPIRE1Q08AE8 756 aa29.56■■■□□ 2.32
VEGFA-207ENST00000413642 RABEP1Q15276 862 aa29.56■■■□□ 2.32
VEGFA-207ENST00000413642 PLA2G4FQ68DD2 849 aa29.56■■■□□ 2.32
VEGFA-207ENST00000413642 NCAPH2Q6IBW4 605 aa29.56■■■□□ 2.32
VEGFA-207ENST00000413642 ANO5Q75V66 913 aa29.56■■■□□ 2.32
VEGFA-207ENST00000413642 FAM228AQ86W67 206 aa29.56■■■□□ 2.32
VEGFA-207ENST00000413642 MAP7D2Q96T17 732 aa29.56■■■□□ 2.32
VEGFA-207ENST00000413642 FTHL17Q9BXU8 183 aa29.56■■■□□ 2.32
VEGFA-207ENST00000413642 TSPYL2Q9H2G4 693 aaPredicted RBP29.56■■■□□ 2.32
VEGFA-207ENST00000413642 CRIPAKQ8N1N5 446 aa29.55■■■□□ 2.32
VEGFA-207ENST00000413642 ZNF579Q8NAF0 562 aaKnown RBP29.55■■■□□ 2.32
VEGFA-207ENST00000413642 RC3H2Q9HBD1 1191 aaKnown RBP29.55■■■□□ 2.32
VEGFA-207ENST00000413642 RGL1Q9NZL6 768 aa29.55■■■□□ 2.32
VEGFA-207ENST00000413642 MYO9BQ13459 2157 aa29.54■■■□□ 2.32
VEGFA-207ENST00000413642 DLL1O00548 723 aa29.54■■■□□ 2.32
VEGFA-207ENST00000413642 BAG4O95429 457 aaKnown RBP29.54■■■□□ 2.32
VEGFA-207ENST00000413642 TMOD1P28289 359 aa29.54■■■□□ 2.32
VEGFA-207ENST00000413642 QARSP47897 775 aaKnown RBP29.54■■■□□ 2.32
VEGFA-207ENST00000413642 NPEPPSP55786 919 aa29.54■■■□□ 2.32
VEGFA-207ENST00000413642 EPHA7Q15375 998 aa29.54■■■□□ 2.32
VEGFA-207ENST00000413642 EPC2Q52LR7 807 aa29.54■■■□□ 2.32
VEGFA-207ENST00000413642 FBXO22Q8NEZ5 403 aa29.54■■■□□ 2.32
VEGFA-207ENST00000413642 DGKIO75912 1065 aa29.53■■■□□ 2.32
VEGFA-207ENST00000413642 CD2BP2O95400 341 aaKnown RBP29.53■■■□□ 2.32
VEGFA-207ENST00000413642 GATMP50440 423 aa29.53■■■□□ 2.32
VEGFA-207ENST00000413642 SAFBQ15424 915 aaKnown RBP eCLIP29.53■■■□□ 2.32
VEGFA-207ENST00000413642 CALCRLQ16602 461 aa29.53■■■□□ 2.32
VEGFA-207ENST00000413642 SLFN12Q8IYM2 578 aa29.53■■■□□ 2.32
VEGFA-207ENST00000413642 DYDC2Q96IM9 177 aa29.53■■■□□ 2.32
VEGFA-207ENST00000413642 ADAM2Q99965 735 aa29.53■■■□□ 2.32
VEGFA-207ENST00000413642 EYSQ5T1H1 3165 aa29.52■■■□□ 2.32
VEGFA-207ENST00000413642 P4HBP07237 508 aaKnown RBP29.52■■■□□ 2.32
VEGFA-207ENST00000413642 GPC3P51654 580 aa29.52■■■□□ 2.32
VEGFA-207ENST00000413642 HMGN5P82970 282 aaKnown RBP29.52■■■□□ 2.32
VEGFA-207ENST00000413642 CTTNQ14247 550 aaKnown RBP29.52■■■□□ 2.32
VEGFA-207ENST00000413642 TMEM192Q8IY95 271 aa29.52■■■□□ 2.32
VEGFA-207ENST00000413642 FIBCD1Q8N539 461 aa29.52■■■□□ 2.32
VEGFA-207ENST00000413642 FAM184AQ8NB25 1140 aa29.52■■■□□ 2.32
VEGFA-207ENST00000413642 ZNF689Q96CS4 500 aaPredicted RBP29.52■■■□□ 2.32
VEGFA-207ENST00000413642 TMEM60Q9H2L4 133 aa29.52■■■□□ 2.32
VEGFA-207ENST00000413642 ADGRA3Q8IWK6 1321 aa29.51■■■□□ 2.32
VEGFA-207ENST00000413642 IGKV6-21A0A0C4DH24 114 aa29.51■■■□□ 2.31
VEGFA-207ENST00000413642 ZBTB39O15060 712 aa29.51■■■□□ 2.31
VEGFA-207ENST00000413642 GPR182O15218 404 aa29.51■■■□□ 2.31
VEGFA-207ENST00000413642 LINC00271P0C7V0 271 aa29.51■■■□□ 2.31
VEGFA-207ENST00000413642 TXKP42681 527 aa29.51■■■□□ 2.31
VEGFA-207ENST00000413642 CYP4A11Q02928 519 aa29.51■■■□□ 2.31
VEGFA-207ENST00000413642 NPAS4Q8IUM7 802 aa29.51■■■□□ 2.31
VEGFA-207ENST00000413642 FBXO18Q8NFZ0 1043 aa29.51■■■□□ 2.31
VEGFA-207ENST00000413642 LXNQ9BS40 222 aa29.51■■■□□ 2.31
VEGFA-207ENST00000413642 MYH9P35579 1960 aaKnown RBP29.51■■■□□ 2.31
VEGFA-207ENST00000413642 NEMFO60524 1076 aa29.5■■■□□ 2.31
VEGFA-207ENST00000413642 MAFO75444 373 aaPredicted RBP29.5■■■□□ 2.31
VEGFA-207ENST00000413642 CSDE1O75534 798 aaKnown RBP29.5■■■□□ 2.31
VEGFA-207ENST00000413642 FGFR4P22455 802 aa29.5■■■□□ 2.31
VEGFA-207ENST00000413642 BTG3Q14201 252 aaPredicted RBP29.5■■■□□ 2.31
VEGFA-207ENST00000413642 SKIV2LQ15477 1246 aaKnown RBP29.5■■■□□ 2.31
VEGFA-207ENST00000413642 MTMR9Q96QG7 549 aa29.5■■■□□ 2.31
VEGFA-207ENST00000413642 COL25A1Q9BXS0 654 aaPredicted RBP29.5■■■□□ 2.31
VEGFA-207ENST00000413642 CYP26B1Q9NR63 512 aa29.5■■■□□ 2.31
VEGFA-207ENST00000413642 PCDHA12Q9UN75 941 aa29.5■■■□□ 2.31
VEGFA-207ENST00000413642 DENND3A2RUS2 1198 aa29.49■■■□□ 2.31
VEGFA-207ENST00000413642 MCM7P33993 719 aa29.49■■■□□ 2.31
VEGFA-207ENST00000413642 DSC3Q14574 896 aa29.49■■■□□ 2.31
VEGFA-207ENST00000413642 SCLT1Q96NL6 688 aa29.49■■■□□ 2.31
VEGFA-207ENST00000413642 TTC12Q9H892 705 aaPredicted RBP29.49■■■□□ 2.31
VEGFA-207ENST00000413642 UPF2Q9HAU5 1272 aaKnown RBP29.49■■■□□ 2.31
VEGFA-207ENST00000413642 RGS18Q9NS28 235 aa29.49■■■□□ 2.31
VEGFA-207ENST00000413642 COL4A4P53420 1690 aaPredicted RBP29.48■■■□□ 2.31
VEGFA-207ENST00000413642 COL4A6Q14031 1691 aa29.48■■■□□ 2.31
VEGFA-207ENST00000413642 ST18O60284 1047 aa29.48■■■□□ 2.31
VEGFA-207ENST00000413642 EIF4BP23588 611 aaKnown RBP29.48■■■□□ 2.31
VEGFA-207ENST00000413642 SARSP49591 514 aaKnown RBP29.48■■■□□ 2.31
VEGFA-207ENST00000413642 GPM6BQ13491 265 aa29.48■■■□□ 2.31
VEGFA-207ENST00000413642 PAN2Q504Q3 1202 aaKnown RBP29.48■■■□□ 2.31
VEGFA-207ENST00000413642 TPH2Q8IWU9 490 aa29.48■■■□□ 2.31
VEGFA-207ENST00000413642 C4orf19Q8IY42 314 aa29.48■■■□□ 2.31
VEGFA-207ENST00000413642 NLRP7Q8WX94 980 aa29.48■■■□□ 2.31
VEGFA-207ENST00000413642 CEP170P1Q96L14 293 aa29.48■■■□□ 2.31
VEGFA-207ENST00000413642 SAMD11Q96NU1 681 aa29.48■■■□□ 2.31
VEGFA-207ENST00000413642 EIF2AK1Q9BQI3 630 aaKnown RBP29.48■■■□□ 2.31
VEGFA-207ENST00000413642 BMP2KQ9NSY1 1161 aaPredicted RBP29.48■■■□□ 2.31
VEGFA-207ENST00000413642 SUCLA2Q9P2R7 463 aaPredicted RBP29.48■■■□□ 2.31
VEGFA-207ENST00000413642 THEGQ9P2T0 379 aa29.48■■■□□ 2.31
VEGFA-207ENST00000413642 LRFN2Q9ULH4 789 aa29.48■■■□□ 2.31
VEGFA-207ENST00000413642 EVPLQ92817 2033 aa29.48■■■□□ 2.31
VEGFA-207ENST00000413642 C9IYK1 514 aa29.47■■■□□ 2.31
VEGFA-207ENST00000413642 SLITRK3O94933 977 aa29.47■■■□□ 2.31
VEGFA-207ENST00000413642 STAG3L1P0CL83 205 aa29.47■■■□□ 2.31
VEGFA-207ENST00000413642 DARSP14868 501 aaKnown RBP29.47■■■□□ 2.31
VEGFA-207ENST00000413642 CTNNB1P35222 781 aa29.47■■■□□ 2.31
VEGFA-207ENST00000413642 ZNF174Q15697 407 aa29.47■■■□□ 2.31
VEGFA-207ENST00000413642 ODR4Q5SWX8 454 aa29.47■■■□□ 2.31
VEGFA-207ENST00000413642 KSR1Q8IVT5 923 aa29.47■■■□□ 2.31
VEGFA-207ENST00000413642 TMX3Q96JJ7 454 aa29.47■■■□□ 2.31
VEGFA-207ENST00000413642 TBC1D32Q96NH3 1257 aa29.47■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms