RNA–Protein interactions for RNA: ENST00000413601.3

LIMS4-201, Transcript of LIM zinc finger domain containing 4, humanhuman

TSL 1 (best) BASIC

Gene LIMS4, Length 1,215 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS4-201ENST00000413601 EPHA7Q15375 998 aa16.63■□□□□ 0.25
LIMS4-201ENST00000413601 KIZQ2M2Z5 673 aa16.63■□□□□ 0.25
LIMS4-201ENST00000413601 ANO5Q75V66 913 aa16.63■□□□□ 0.25
LIMS4-201ENST00000413601 LINC01465Q8N7H1 131 aa16.63■□□□□ 0.25
LIMS4-201ENST00000413601 TMEM40Q8WWA1 233 aa16.63■□□□□ 0.25
LIMS4-201ENST00000413601 MAP7D2Q96T17 732 aa16.63■□□□□ 0.25
LIMS4-201ENST00000413601 TTC12Q9H892 705 aaPredicted RBP16.63■□□□□ 0.25
LIMS4-201ENST00000413601 RGL1Q9NZL6 768 aa16.63■□□□□ 0.25
LIMS4-201ENST00000413601 WRAP73Q9P2S5 460 aaPredicted RBP16.63■□□□□ 0.25
LIMS4-201ENST00000413601 PCDHA12Q9UN75 941 aa16.63■□□□□ 0.25
LIMS4-201ENST00000413601 AKT3Q9Y243 479 aa16.63■□□□□ 0.25
LIMS4-201ENST00000413601 NOC2LQ9Y3T9 749 aaKnown RBP16.63■□□□□ 0.25
LIMS4-201ENST00000413601 INSL6Q9Y581 213 aa16.63■□□□□ 0.25
LIMS4-201ENST00000413601 EPOPA6NHQ4 379 aa16.62■□□□□ 0.25
LIMS4-201ENST00000413601 RFXAPO00287 272 aa16.62■□□□□ 0.25
LIMS4-201ENST00000413601 GPR32O75388 356 aa16.62■□□□□ 0.25
LIMS4-201ENST00000413601 IGFBP4P22692 258 aa16.62■□□□□ 0.25
LIMS4-201ENST00000413601 CRYBB1P53674 252 aaPredicted RBP16.62■□□□□ 0.25
LIMS4-201ENST00000413601 NLRP11P59045 1033 aaKnown RBP16.62■□□□□ 0.25
LIMS4-201ENST00000413601 HTRA4P83105 476 aaPredicted RBP16.62■□□□□ 0.25
LIMS4-201ENST00000413601 NFX1Q12986 1120 aaKnown RBP16.62■□□□□ 0.25
LIMS4-201ENST00000413601 ZNF174Q15697 407 aa16.62■□□□□ 0.25
LIMS4-201ENST00000413601 PLA2G4FQ68DD2 849 aa16.62■□□□□ 0.25
LIMS4-201ENST00000413601 RTN4RL1Q86UN2 441 aaPredicted RBP16.62■□□□□ 0.25
LIMS4-201ENST00000413601 NOSTRINQ8IVI9 506 aa16.62■□□□□ 0.25
LIMS4-201ENST00000413601 LINC01599Q8WXQ3 324 aa16.62■□□□□ 0.25
LIMS4-201ENST00000413601 ARNTL2Q8WYA1 636 aa16.62■□□□□ 0.25
LIMS4-201ENST00000413601 DYDC2Q96IM9 177 aa16.62■□□□□ 0.25
LIMS4-201ENST00000413601 MTMR9Q96QG7 549 aa16.62■□□□□ 0.25
LIMS4-201ENST00000413601 CEP89Q96ST8 783 aa16.62■□□□□ 0.25
LIMS4-201ENST00000413601 OSMRQ99650 979 aa16.62■□□□□ 0.25
LIMS4-201ENST00000413601 TMEM60Q9H2L4 133 aa16.62■□□□□ 0.25
LIMS4-201ENST00000413601 KIAA1671Q9BY89 1806 aa16.61■□□□□ 0.25
LIMS4-201ENST00000413601 LINC01553A4QN01 128 aa16.61■□□□□ 0.25
LIMS4-201ENST00000413601 DKC1O60832 514 aaKnown RBP eCLIP16.61■□□□□ 0.25
LIMS4-201ENST00000413601 RPS6KA5O75582 802 aa16.61■□□□□ 0.25
LIMS4-201ENST00000413601 NPEPPSP55786 919 aa16.61■□□□□ 0.25
LIMS4-201ENST00000413601 CYP4A11Q02928 519 aa16.61■□□□□ 0.25
LIMS4-201ENST00000413601 DRP2Q13474 957 aa16.61■□□□□ 0.25
LIMS4-201ENST00000413601 CTTNQ14247 550 aaKnown RBP16.61■□□□□ 0.25
LIMS4-201ENST00000413601 ZNF668Q96K58 619 aaPredicted RBP16.61■□□□□ 0.25
LIMS4-201ENST00000413601 YME1L1Q96TA2 773 aa16.61■□□□□ 0.25
LIMS4-201ENST00000413601 LXNQ9BS40 222 aa16.61■□□□□ 0.25
LIMS4-201ENST00000413601 FTHL17Q9BXU8 183 aa16.61■□□□□ 0.25
LIMS4-201ENST00000413601 TMX1Q9H3N1 280 aa16.61■□□□□ 0.25
LIMS4-201ENST00000413601 ERVK-5Q9HDB9 667 aa16.61■□□□□ 0.25
LIMS4-201ENST00000413601 MTUS1Q9ULD2 1270 aa16.61■□□□□ 0.25
LIMS4-201ENST00000413601 KIF3AQ9Y496 699 aa16.61■□□□□ 0.25
LIMS4-201ENST00000413601 ZBTB39O15060 712 aa16.6■□□□□ 0.25
LIMS4-201ENST00000413601 U2AF2P26368 475 aaKnown RBP eCLIP16.6■□□□□ 0.25
LIMS4-201ENST00000413601 GJB2P29033 226 aa16.6■□□□□ 0.25
LIMS4-201ENST00000413601 TPH2Q8IWU9 490 aa16.6■□□□□ 0.25
LIMS4-201ENST00000413601 C4orf19Q8IY42 314 aa16.6■□□□□ 0.25
LIMS4-201ENST00000413601 ZNF579Q8NAF0 562 aaKnown RBP16.6■□□□□ 0.25
LIMS4-201ENST00000413601 EIF2AK1Q9BQI3 630 aaKnown RBP16.6■□□□□ 0.25
LIMS4-201ENST00000413601 ADAMTS10Q9H324 1103 aa16.6■□□□□ 0.25
LIMS4-201ENST00000413601 CYP26B1Q9NR63 512 aa16.6■□□□□ 0.25
LIMS4-201ENST00000413601 ST3GAL5Q9UNP4 418 aa16.6■□□□□ 0.25
LIMS4-201ENST00000413601 FNDC1Q4ZHG4 1894 aaPredicted RBP16.6■□□□□ 0.25
LIMS4-201ENST00000413601 CHD7Q9P2D1 2997 aa16.6■□□□□ 0.25
LIMS4-201ENST00000413601 IGKV6-21A0A0C4DH24 114 aa16.59■□□□□ 0.25
LIMS4-201ENST00000413601 MAFO75444 373 aaPredicted RBP16.59■□□□□ 0.25
LIMS4-201ENST00000413601 SLITRK3O94933 977 aa16.59■□□□□ 0.25
LIMS4-201ENST00000413601 YWHABP31946 246 aaKnown RBP16.59■□□□□ 0.25
LIMS4-201ENST00000413601 GPC3P51654 580 aa16.59■□□□□ 0.25
LIMS4-201ENST00000413601 NBR1Q14596 966 aa16.59■□□□□ 0.25
LIMS4-201ENST00000413601 TTC38Q5R3I4 469 aa16.59■□□□□ 0.25
LIMS4-201ENST00000413601 FAM228AQ86W67 206 aa16.59■□□□□ 0.25
LIMS4-201ENST00000413601 SLC17A8Q8NDX2 589 aa16.59■□□□□ 0.25
LIMS4-201ENST00000413601 SP7Q8TDD2 431 aaPredicted RBP16.59■□□□□ 0.25
LIMS4-201ENST00000413601 CEP170P1Q96L14 293 aa16.59■□□□□ 0.25
LIMS4-201ENST00000413601 TGS1Q96RS0 853 aaKnown RBP16.59■□□□□ 0.25
LIMS4-201ENST00000413601 TSPYL2Q9H2G4 693 aaPredicted RBP16.59■□□□□ 0.25
LIMS4-201ENST00000413601 ZSWIM4Q9H7M6 989 aa16.59■□□□□ 0.25
LIMS4-201ENST00000413601 COL4A6Q14031 1691 aa16.59■□□□□ 0.25
LIMS4-201ENST00000413601 POTEMA6NI47 508 aa16.58■□□□□ 0.24
LIMS4-201ENST00000413601 GPR182O15218 404 aa16.58■□□□□ 0.24
LIMS4-201ENST00000413601 MGEA5O60502 916 aa16.58■□□□□ 0.24
LIMS4-201ENST00000413601 DNM2P50570 870 aa16.58■□□□□ 0.24
LIMS4-201ENST00000413601 ERVK-21P61565 698 aa16.58■□□□□ 0.24
LIMS4-201ENST00000413601 ODR4Q5SWX8 454 aa16.58■□□□□ 0.24
LIMS4-201ENST00000413601 MCTP1Q6DN14 999 aa16.58■□□□□ 0.24
LIMS4-201ENST00000413601 PPM1EQ8WY54 764 aa16.58■□□□□ 0.24
LIMS4-201ENST00000413601 SCLT1Q96NL6 688 aa16.58■□□□□ 0.24
LIMS4-201ENST00000413601 HSD17B14Q9BPX1 270 aa16.58■□□□□ 0.24
LIMS4-201ENST00000413601 C17orf80Q9BSJ5 609 aa16.58■□□□□ 0.24
LIMS4-201ENST00000413601 NOL7Q9UMY1 257 aaKnown RBP16.58■□□□□ 0.24
LIMS4-201ENST00000413601 SMC3Q9UQE7 1217 aa16.58■□□□□ 0.24
LIMS4-201ENST00000413601 EYSQ5T1H1 3165 aa16.58■□□□□ 0.24
LIMS4-201ENST00000413601 DENND3A2RUS2 1198 aa16.57■□□□□ 0.24
LIMS4-201ENST00000413601 OR52Z1P0C646 297 aa16.57■□□□□ 0.24
LIMS4-201ENST00000413601 IBSPP21815 317 aaPredicted RBP16.57■□□□□ 0.24
LIMS4-201ENST00000413601 EIF4BP23588 611 aaKnown RBP16.57■□□□□ 0.24
LIMS4-201ENST00000413601 TECP42680 631 aa16.57■□□□□ 0.24
LIMS4-201ENST00000413601 TRAPPC10P48553 1259 aa16.57■□□□□ 0.24
LIMS4-201ENST00000413601 TOB1P50616 345 aaPredicted RBP16.57■□□□□ 0.24
LIMS4-201ENST00000413601 ORC2Q13416 577 aaPredicted RBP16.57■□□□□ 0.24
LIMS4-201ENST00000413601 CCDC85BQ15834 202 aaPredicted RBP16.57■□□□□ 0.24
LIMS4-201ENST00000413601 XKR9Q5GH70 373 aa16.57■□□□□ 0.24
LIMS4-201ENST00000413601 OTUD6AQ7L8S5 288 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms