RNA–Protein interactions for RNA: ENST00000409766.7

USP39-204, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,033 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-204ENST00000409766 MAGEA1P43355 309 aa22.06■■□□□ 1.12
USP39-204ENST00000409766 RAPGEF1Q13905 1077 aa22.06■■□□□ 1.12
USP39-204ENST00000409766 TMEM132BQ14DG7 1078 aa22.06■■□□□ 1.12
USP39-204ENST00000409766 NOL9Q5SY16 702 aaKnown RBP22.06■■□□□ 1.12
USP39-204ENST00000409766 KLHDC7AQ5VTJ3 777 aa22.06■■□□□ 1.12
USP39-204ENST00000409766 TCERG1LQ5VWI1 586 aa22.06■■□□□ 1.12
USP39-204ENST00000409766 CATSPERGQ6ZRH7 1159 aa22.06■■□□□ 1.12
USP39-204ENST00000409766 FAM186BQ8IYM0 893 aa22.06■■□□□ 1.12
USP39-204ENST00000409766 SAR1BQ9Y6B6 198 aa22.06■■□□□ 1.12
USP39-204ENST00000409766 GTPBP10A4D1E9 387 aaKnown RBP22.05■■□□□ 1.12
USP39-204ENST00000409766 ATP2A1O14983 1001 aa22.05■■□□□ 1.12
USP39-204ENST00000409766 CCNE2O96020 404 aa22.05■■□□□ 1.12
USP39-204ENST00000409766 YWHABP31946 246 aaKnown RBP22.05■■□□□ 1.12
USP39-204ENST00000409766 UGCGQ16739 394 aa22.05■■□□□ 1.12
USP39-204ENST00000409766 C4orf19Q8IY42 314 aa22.05■■□□□ 1.12
USP39-204ENST00000409766 PARD6BQ9BYG5 372 aa22.05■■□□□ 1.12
USP39-204ENST00000409766 NR3C2P08235 984 aa22.04■■□□□ 1.12
USP39-204ENST00000409766 MAPTP10636 758 aaKnown RBP22.04■■□□□ 1.12
USP39-204ENST00000409766 SFNP31947 248 aa22.04■■□□□ 1.12
USP39-204ENST00000409766 JAK3P52333 1124 aa22.04■■□□□ 1.12
USP39-204ENST00000409766 KRT76Q01546 638 aa22.04■■□□□ 1.12
USP39-204ENST00000409766 GBP6Q6ZN66 633 aa22.04■■□□□ 1.12
USP39-204ENST00000409766 TRIM58Q8NG06 486 aa22.04■■□□□ 1.12
USP39-204ENST00000409766 GOLGA5Q8TBA6 731 aa22.04■■□□□ 1.12
USP39-204ENST00000409766 LARSQ9P2J5 1176 aaKnown RBP22.04■■□□□ 1.12
USP39-204ENST00000409766 FBXL5Q9UKA1 691 aa22.04■■□□□ 1.12
USP39-204ENST00000409766 AFG3L2Q9Y4W6 797 aa22.04■■□□□ 1.12
USP39-204ENST00000409766 KIAA1217Q5T5P2 1943 aa22.04■■□□□ 1.12
USP39-204ENST00000409766 CTAGE15A4D2H0 777 aa22.04■■□□□ 1.12
USP39-204ENST00000409766 WDR64B1ANS9 1081 aa22.04■■□□□ 1.12
USP39-204ENST00000409766 PPP1R12BO60237 982 aaPredicted RBP22.04■■□□□ 1.12
USP39-204ENST00000409766 CTAGE8P0CG41 777 aa22.04■■□□□ 1.12
USP39-204ENST00000409766 LMNB1P20700 586 aa22.04■■□□□ 1.12
USP39-204ENST00000409766 CCND2P30279 289 aa22.04■■□□□ 1.12
USP39-204ENST00000409766 MAEAQ7L5Y9 396 aa22.04■■□□□ 1.12
USP39-204ENST00000409766 CTAGE6Q86UF2 777 aa22.04■■□□□ 1.12
USP39-204ENST00000409766 CTAGE4Q8IX94 777 aa22.04■■□□□ 1.12
USP39-204ENST00000409766 FAM133AQ8N9E0 248 aa22.04■■□□□ 1.12
USP39-204ENST00000409766 SIX2Q9NPC8 291 aa22.04■■□□□ 1.12
USP39-204ENST00000409766 CAPN6Q9Y6Q1 641 aa22.04■■□□□ 1.12
USP39-204ENST00000409766 MYH10P35580 1976 aa22.03■■□□□ 1.12
USP39-204ENST00000409766 WDR81Q562E7 1941 aa22.03■■□□□ 1.12
USP39-204ENST00000409766 ZRANB2O95218 330 aaKnown RBP eCLIP22.03■■□□□ 1.12
USP39-204ENST00000409766 PSMC5P62195 406 aa22.03■■□□□ 1.12
USP39-204ENST00000409766 CBX1P83916 185 aa22.03■■□□□ 1.12
USP39-204ENST00000409766 ASIC2Q16515 512 aa22.03■■□□□ 1.12
USP39-204ENST00000409766 SUPT20HL1Q3ZLR7 823 aa22.03■■□□□ 1.12
USP39-204ENST00000409766 SLC9A9Q8IVB4 645 aa22.03■■□□□ 1.12
USP39-204ENST00000409766 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.03■■□□□ 1.123e-6■□□□□ 9.8
USP39-204ENST00000409766 GPRASP2Q96D09 838 aa22.03■■□□□ 1.12
USP39-204ENST00000409766 MLXIPQ9HAP2 919 aa22.03■■□□□ 1.12
USP39-204ENST00000409766 FAM53CQ9NYF3 392 aa22.03■■□□□ 1.12
USP39-204ENST00000409766 TMOD4Q9NZQ9 345 aa22.03■■□□□ 1.12
USP39-204ENST00000409766 FHOD1Q9Y613 1164 aa22.03■■□□□ 1.12
USP39-204ENST00000409766 K7ENM7 598 aa22.02■■□□□ 1.12
USP39-204ENST00000409766 KLHL30Q0D2K2 578 aa22.02■■□□□ 1.12
USP39-204ENST00000409766 SLC18A3Q16572 532 aa22.02■■□□□ 1.12
USP39-204ENST00000409766 TMCO3Q6UWJ1 677 aa22.02■■□□□ 1.12
USP39-204ENST00000409766 IRF2BP2Q7Z5L9 587 aa22.02■■□□□ 1.12
USP39-204ENST00000409766 TXLNBQ8N3L3 684 aa22.02■■□□□ 1.12
USP39-204ENST00000409766 INPP4AQ96PE3 977 aaPredicted RBP22.02■■□□□ 1.12
USP39-204ENST00000409766 TEX13BQ9BXU2 312 aa22.02■■□□□ 1.12
USP39-204ENST00000409766 FHDC1Q9C0D6 1143 aaPredicted RBP22.02■■□□□ 1.12
USP39-204ENST00000409766 ANKZF1Q9H8Y5 726 aa22.02■■□□□ 1.12
USP39-204ENST00000409766 GCNT4Q9P109 453 aa22.02■■□□□ 1.12
USP39-204ENST00000409766 WDR90Q96KV7 1748 aa22.02■■□□□ 1.12
USP39-204ENST00000409766 SBF1O95248 1867 aa22.02■■□□□ 1.12
USP39-204ENST00000409766 MAFGO15525 162 aa22.02■■□□□ 1.12
USP39-204ENST00000409766 TACC1O75410 805 aa22.02■■□□□ 1.12
USP39-204ENST00000409766 PLS3P13797 630 aa22.02■■□□□ 1.12
USP39-204ENST00000409766 CYP2J2P51589 502 aa22.02■■□□□ 1.12
USP39-204ENST00000409766 ARID5AQ03989 594 aa22.02■■□□□ 1.12
USP39-204ENST00000409766 ALCAMQ13740 583 aa22.02■■□□□ 1.12
USP39-204ENST00000409766 MYBPC2Q14324 1141 aa22.02■■□□□ 1.12
USP39-204ENST00000409766 NSUN6Q8TEA1 469 aaKnown RBP22.02■■□□□ 1.12
USP39-204ENST00000409766 SALL4Q9UJQ4 1053 aa22.02■■□□□ 1.12
USP39-204ENST00000409766 FRMD4BQ9Y2L6 1034 aa22.02■■□□□ 1.12
USP39-204ENST00000409766 JRKLQ9Y4A0 524 aa22.02■■□□□ 1.12
USP39-204ENST00000409766 TMEM150BA6NC51 233 aa22.01■■□□□ 1.11
USP39-204ENST00000409766 SRGAP2O75044 1071 aa22.01■■□□□ 1.11
USP39-204ENST00000409766 MOCS3O95396 460 aa22.01■■□□□ 1.11
USP39-204ENST00000409766 ZNF746Q6NUN9 644 aaPredicted RBP22.01■■□□□ 1.11
USP39-204ENST00000409766 SYCP3Q8IZU3 236 aa22.01■■□□□ 1.11
USP39-204ENST00000409766 RDM1Q8NG50 284 aa22.01■■□□□ 1.11
USP39-204ENST00000409766 SENP7Q9BQF6 1050 aa22.01■■□□□ 1.11
USP39-204ENST00000409766 SH2D3AQ9BRG2 576 aa22.01■■□□□ 1.11
USP39-204ENST00000409766 TIPINQ9BVW5 301 aa22.01■■□□□ 1.11
USP39-204ENST00000409766 HOXC10Q9NYD6 342 aa22.01■■□□□ 1.11
USP39-204ENST00000409766 CYP39A1Q9NYL5 469 aa22.01■■□□□ 1.11
USP39-204ENST00000409766 SPDYE16A6NNV3 312 aaPredicted RBP22.01■■□□□ 1.11
USP39-204ENST00000409766 BACH1O14867 736 aa22.01■■□□□ 1.11
USP39-204ENST00000409766 USP2O75604 605 aaPredicted RBP22.01■■□□□ 1.11
USP39-204ENST00000409766 RGS20O76081 388 aa22.01■■□□□ 1.11
USP39-204ENST00000409766 UTP14CQ5TAP6 766 aaKnown RBP22.01■■□□□ 1.11
USP39-204ENST00000409766 NLRX1Q86UT6 975 aa22.01■■□□□ 1.11
USP39-204ENST00000409766 MSANTD4Q8NCY6 345 aa22.01■■□□□ 1.11
USP39-204ENST00000409766 TMEM174Q8WUU8 243 aa22.01■■□□□ 1.11
USP39-204ENST00000409766 SPAG5Q96R06 1193 aa22.01■■□□□ 1.11
USP39-204ENST00000409766 MOV10L1Q9BXT6 1211 aaKnown RBP22.01■■□□□ 1.11
USP39-204ENST00000409766 TMEM206Q9H813 350 aa22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms