RNA–Protein interactions for RNA: ENST00000409483.5

PTPRN2-205, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PTPRN2, Length 4,711 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-205ENST00000409483 FYB2Q5VWT5 728 aa17.8■□□□□ 0.44
PTPRN2-205ENST00000409483 ARHGEF2Q92974 986 aaKnown RBP17.8■□□□□ 0.44
PTPRN2-205ENST00000409483 ADPGKQ9BRR6 497 aa17.8■□□□□ 0.44
PTPRN2-205ENST00000409483 MSTO1Q9BUK6 570 aa17.8■□□□□ 0.44
PTPRN2-205ENST00000409483 FBXO28Q9NVF7 368 aa17.8■□□□□ 0.44
PTPRN2-205ENST00000409483 ANAPC7Q9UJX3 599 aa17.8■□□□□ 0.44
PTPRN2-205ENST00000409483 PRR12Q9ULL5 1215 aa17.8■□□□□ 0.44
PTPRN2-205ENST00000409483 SALL1Q9NSC2 1324 aa17.79■□□□□ 0.44
PTPRN2-205ENST00000409483 LRRD1A4D1F6 860 aa17.79■□□□□ 0.44
PTPRN2-205ENST00000409483 ITIH3Q06033 890 aa17.79■□□□□ 0.44
PTPRN2-205ENST00000409483 HADHQ16836 314 aaKnown RBP17.79■□□□□ 0.44
PTPRN2-205ENST00000409483 PLCD3Q8N3E9 789 aa17.79■□□□□ 0.44
PTPRN2-205ENST00000409483 SREK1Q8WXA9 508 aaKnown RBP17.79■□□□□ 0.44
PTPRN2-205ENST00000409483 CALN1Q9BXU9 219 aa17.79■□□□□ 0.44
PTPRN2-205ENST00000409483 EMSYQ7Z589 1322 aa17.79■□□□□ 0.44
PTPRN2-205ENST00000409483 ZNF233A6NK53 670 aa17.79■□□□□ 0.44
PTPRN2-205ENST00000409483 STAMBPO95630 424 aa17.79■□□□□ 0.44
PTPRN2-205ENST00000409483 LRRN4CLQ8ND94 238 aa17.79■□□□□ 0.44
PTPRN2-205ENST00000409483 IL17RBQ9NRM6 502 aa17.79■□□□□ 0.44
PTPRN2-205ENST00000409483 CHORDC1Q9UHD1 332 aaPredicted RBP17.79■□□□□ 0.44
PTPRN2-205ENST00000409483 TFRCP02786 760 aaKnown RBP17.79■□□□□ 0.44
PTPRN2-205ENST00000409483 QARSP47897 775 aaKnown RBP17.79■□□□□ 0.44
PTPRN2-205ENST00000409483 BPIFB4P59827 614 aa17.79■□□□□ 0.44
PTPRN2-205ENST00000409483 FAM160B1Q5W0V3 765 aa17.79■□□□□ 0.44
PTPRN2-205ENST00000409483 BARGINQ6ZT62 677 aa17.79■□□□□ 0.44
PTPRN2-205ENST00000409483 PALM3A6NDB9 673 aaPredicted RBP17.79■□□□□ 0.44
PTPRN2-205ENST00000409483 H7C0C1 242 aa17.79■□□□□ 0.44
PTPRN2-205ENST00000409483 FTLP02792 175 aaPredicted RBP17.79■□□□□ 0.44
PTPRN2-205ENST00000409483 PSAPP07602 524 aa17.79■□□□□ 0.44
PTPRN2-205ENST00000409483 ATP5OP48047 213 aa17.79■□□□□ 0.44
PTPRN2-205ENST00000409483 PPP2R5AQ15172 486 aa17.79■□□□□ 0.44
PTPRN2-205ENST00000409483 GRK7Q8WTQ7 553 aa17.79■□□□□ 0.44
PTPRN2-205ENST00000409483 CNOT8Q9UFF9 292 aaKnown RBP17.79■□□□□ 0.44
PTPRN2-205ENST00000409483 CNTNAP4Q9C0A0 1308 aa17.78■□□□□ 0.44
PTPRN2-205ENST00000409483 CTIFO43310 598 aaKnown RBP17.78■□□□□ 0.44
PTPRN2-205ENST00000409483 NAA25Q14CX7 972 aa17.78■□□□□ 0.44
PTPRN2-205ENST00000409483 CROCCP2Q86T23 111 aa17.78■□□□□ 0.44
PTPRN2-205ENST00000409483 PRPF38AQ8NAV1 312 aaKnown RBP17.78■□□□□ 0.44
PTPRN2-205ENST00000409483 CCDC110Q8TBZ0 833 aa17.78■□□□□ 0.44
PTPRN2-205ENST00000409483 EMBQ6PCB8 327 aa17.78■□□□□ 0.44
PTPRN2-205ENST00000409483 TMEM39BQ9GZU3 492 aa17.78■□□□□ 0.44
PTPRN2-205ENST00000409483 AMACRQ9UHK6 382 aa17.78■□□□□ 0.44
PTPRN2-205ENST00000409483 MAD1L1Q9Y6D9 718 aa17.78■□□□□ 0.44
PTPRN2-205ENST00000409483 WDR64B1ANS9 1081 aa17.78■□□□□ 0.44
PTPRN2-205ENST00000409483 CLTAP09496 248 aa17.78■□□□□ 0.44
PTPRN2-205ENST00000409483 P4HA1P13674 534 aa17.78■□□□□ 0.44
PTPRN2-205ENST00000409483 PPP2R5CQ13362 524 aa17.78■□□□□ 0.44
PTPRN2-205ENST00000409483 C11orf70Q9BRQ4 267 aa17.78■□□□□ 0.44
PTPRN2-205ENST00000409483 INTS2Q9H0H0 1204 aaKnown RBP17.78■□□□□ 0.44
PTPRN2-205ENST00000409483 NWD1Q149M9 1564 aa17.78■□□□□ 0.44
PTPRN2-205ENST00000409483 KRT1P04264 644 aa17.77■□□□□ 0.44
PTPRN2-205ENST00000409483 SLURP2P0DP57 97 aa17.77■□□□□ 0.44
PTPRN2-205ENST00000409483 GYS1P13807 737 aa17.77■□□□□ 0.44
PTPRN2-205ENST00000409483 VAMP7P51809 220 aa17.77■□□□□ 0.44
PTPRN2-205ENST00000409483 PMS1P54277 932 aaKnown RBP17.77■□□□□ 0.44
PTPRN2-205ENST00000409483 FAM149B1Q96BN6 582 aa17.77■□□□□ 0.44
PTPRN2-205ENST00000409483 SEPT10Q9P0V9 454 aa17.77■□□□□ 0.44
PTPRN2-205ENST00000409483 HESX1Q9UBX0 185 aa17.77■□□□□ 0.44
PTPRN2-205ENST00000409483 FHOD1Q9Y613 1164 aa17.77■□□□□ 0.44
PTPRN2-205ENST00000409483 POLR2BP30876 1174 aaKnown RBP17.77■□□□□ 0.44
PTPRN2-205ENST00000409483 MAN1A1P33908 653 aa17.77■□□□□ 0.44
PTPRN2-205ENST00000409483 GRIK5Q16478 980 aa17.77■□□□□ 0.44
PTPRN2-205ENST00000409483 C10orf76Q5T2E6 689 aa17.77■□□□□ 0.44
PTPRN2-205ENST00000409483 PIM2Q9P1W9 311 aa17.77■□□□□ 0.44
PTPRN2-205ENST00000409483 SNX12Q9UMY4 172 aa17.77■□□□□ 0.44
PTPRN2-205ENST00000409483 COL5A2P05997 1499 aaPredicted RBP17.77■□□□□ 0.44
PTPRN2-205ENST00000409483 P4HBP07237 508 aaKnown RBP17.77■□□□□ 0.44
PTPRN2-205ENST00000409483 KCNJ6P48051 423 aa17.77■□□□□ 0.44
PTPRN2-205ENST00000409483 YWHAGP61981 247 aaKnown RBP eCLIP17.77■□□□□ 0.44
PTPRN2-205ENST00000409483 STRIP1Q5VSL9 837 aa17.77■□□□□ 0.44
PTPRN2-205ENST00000409483 DNAJC24Q6P3W2 148 aa17.77■□□□□ 0.44
PTPRN2-205ENST00000409483 GJB7Q6PEY0 223 aa17.77■□□□□ 0.44
PTPRN2-205ENST00000409483 MLXIPLQ9NP71 852 aa17.77■□□□□ 0.44
PTPRN2-205ENST00000409483 PPP4CP60510 307 aa17.77■□□□□ 0.43
PTPRN2-205ENST00000409483 TMEM270Q6UE05 265 aa17.77■□□□□ 0.43
PTPRN2-205ENST00000409483 HAUS6Q7Z4H7 955 aa17.77■□□□□ 0.43
PTPRN2-205ENST00000409483 ANAPC5Q9UJX4 755 aa17.77■□□□□ 0.43
PTPRN2-205ENST00000409483 FEM1BQ9UK73 627 aa17.77■□□□□ 0.43
PTPRN2-205ENST00000409483 MAGED2Q9UNF1 606 aaPredicted RBP17.77■□□□□ 0.43
PTPRN2-205ENST00000409483 HMGCS2P54868 508 aa17.76■□□□□ 0.43
PTPRN2-205ENST00000409483 YWHAEP62258 255 aaKnown RBP17.76■□□□□ 0.43
PTPRN2-205ENST00000409483 HP1BP3Q5SSJ5 553 aaPredicted RBP17.76■□□□□ 0.43
PTPRN2-205ENST00000409483 DPP9Q86TI2 863 aa17.76■□□□□ 0.43
PTPRN2-205ENST00000409483 DNAAF5Q86Y56 855 aa17.76■□□□□ 0.43
PTPRN2-205ENST00000409483 THOC1Q96FV9 657 aaKnown RBP17.76■□□□□ 0.43
PTPRN2-205ENST00000409483 ECE1P42892 770 aa17.76■□□□□ 0.43
PTPRN2-205ENST00000409483 GRB10Q13322 594 aa17.76■□□□□ 0.43
PTPRN2-205ENST00000409483 SUPT20HL1Q3ZLR7 823 aa17.76■□□□□ 0.43
PTPRN2-205ENST00000409483 NEK9Q8TD19 979 aa17.76■□□□□ 0.43
PTPRN2-205ENST00000409483 RTFDC1Q9BY42 306 aaPredicted RBP17.76■□□□□ 0.43
PTPRN2-205ENST00000409483 PDS5AQ29RF7 1337 aaKnown RBP17.76■□□□□ 0.43
PTPRN2-205ENST00000409483 BCL9O00512 1426 aa17.76■□□□□ 0.43
PTPRN2-205ENST00000409483 TNS2Q63HR2 1409 aa17.76■□□□□ 0.43
PTPRN2-205ENST00000409483 RSPH10B2B2RC85 870 aa17.76■□□□□ 0.43
PTPRN2-205ENST00000409483 EYA4O95677 639 aa17.76■□□□□ 0.43
PTPRN2-205ENST00000409483 RSPH10BP0C881 870 aa17.76■□□□□ 0.43
PTPRN2-205ENST00000409483 APBA1Q02410 837 aa17.76■□□□□ 0.43
PTPRN2-205ENST00000409483 RFX6Q8HWS3 928 aa17.76■□□□□ 0.43
PTPRN2-205ENST00000409483 GDAP1Q8TB36 358 aa17.76■□□□□ 0.43
PTPRN2-205ENST00000409483 CDHR1Q96JP9 859 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms