RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 RSPH10B2B2RC85 870 aa15.69■□□□□ 0.1
CHRNA1-204ENST00000409323 CABYRO75952 493 aa15.69■□□□□ 0.1
CHRNA1-204ENST00000409323 C22orf31O95567 290 aa15.69■□□□□ 0.1
CHRNA1-204ENST00000409323 SLFN14P0C7P3 912 aa15.69■□□□□ 0.1
CHRNA1-204ENST00000409323 RSPH10BP0C881 870 aa15.69■□□□□ 0.1
CHRNA1-204ENST00000409323 CYP11B2P19099 503 aa15.69■□□□□ 0.1
CHRNA1-204ENST00000409323 EMC2Q15006 297 aa15.69■□□□□ 0.1
CHRNA1-204ENST00000409323 MTHFD1LQ6UB35 978 aa15.69■□□□□ 0.1
CHRNA1-204ENST00000409323 SV2BQ7L1I2 683 aa15.69■□□□□ 0.1
CHRNA1-204ENST00000409323 FAM49AQ9H0Q0 323 aaPredicted RBP15.69■□□□□ 0.1
CHRNA1-204ENST00000409323 TRPV6Q9H1D0 765 aa15.69■□□□□ 0.1
CHRNA1-204ENST00000409323 C11orf49Q9H6J7 331 aa15.69■□□□□ 0.1
CHRNA1-204ENST00000409323 XPNPEP1Q9NQW7 623 aa15.69■□□□□ 0.1
CHRNA1-204ENST00000409323 GTF2IRD1Q9UHL9 959 aa15.69■□□□□ 0.1
CHRNA1-204ENST00000409323 TUBE1Q9UJT0 475 aa15.69■□□□□ 0.1
CHRNA1-204ENST00000409323 MYH11P35749 1972 aa15.68■□□□□ 0.1
CHRNA1-204ENST00000409323 NRCAMQ92823 1304 aa15.68■□□□□ 0.1
CHRNA1-204ENST00000409323 SLC26A4O43511 780 aa15.68■□□□□ 0.1
CHRNA1-204ENST00000409323 B4GALT4O60513 344 aa15.68■□□□□ 0.1
CHRNA1-204ENST00000409323 PQBP1O60828 265 aaKnown RBP15.68■□□□□ 0.1
CHRNA1-204ENST00000409323 KINO60870 393 aaKnown RBP15.68■□□□□ 0.1
CHRNA1-204ENST00000409323 PNOCQ13519 176 aa15.68■□□□□ 0.1
CHRNA1-204ENST00000409323 CUL4BQ13620 913 aa15.68■□□□□ 0.1
CHRNA1-204ENST00000409323 ZNF484Q5JVG2 852 aa15.68■□□□□ 0.1
CHRNA1-204ENST00000409323 EFCAB12Q6NXP0 572 aa15.68■□□□□ 0.1
CHRNA1-204ENST00000409323 NFRKBQ6P4R8 1299 aa15.68■□□□□ 0.1
CHRNA1-204ENST00000409323 WNT8BQ93098 351 aa15.68■□□□□ 0.1
CHRNA1-204ENST00000409323 ZHX3Q9H4I2 956 aa15.68■□□□□ 0.1
CHRNA1-204ENST00000409323 ARVCFO00192 962 aa15.67■□□□□ 0.1
CHRNA1-204ENST00000409323 KRT18P05783 430 aaKnown RBP15.67■□□□□ 0.1
CHRNA1-204ENST00000409323 COL6A1P12109 1028 aa15.67■□□□□ 0.1
CHRNA1-204ENST00000409323 XRCC6P12956 609 aaKnown RBP eCLIP15.67■□□□□ 0.1
CHRNA1-204ENST00000409323 TMEM62Q0P6H9 643 aa15.67■□□□□ 0.1
CHRNA1-204ENST00000409323 MKRN4PQ13434 485 aaPredicted RBP15.67■□□□□ 0.1
CHRNA1-204ENST00000409323 PTGISQ16647 500 aa15.67■□□□□ 0.1
CHRNA1-204ENST00000409323 TRIM60Q495X7 471 aa15.67■□□□□ 0.1
CHRNA1-204ENST00000409323 FAM102BQ5T8I3 360 aa15.67■□□□□ 0.1
CHRNA1-204ENST00000409323 SLC39A5Q6ZMH5 540 aa15.67■□□□□ 0.1
CHRNA1-204ENST00000409323 C1orf186Q6ZWK4 172 aa15.67■□□□□ 0.1
CHRNA1-204ENST00000409323 DDX12PQ92771 950 aa15.67■□□□□ 0.1
CHRNA1-204ENST00000409323 CTAGE1Q96RT6 745 aa15.67■□□□□ 0.1
CHRNA1-204ENST00000409323 REEP2Q9BRK0 252 aa15.67■□□□□ 0.1
CHRNA1-204ENST00000409323 ATP6V0A4Q9HBG4 840 aa15.67■□□□□ 0.1
CHRNA1-204ENST00000409323 KBTBD4Q9NVX7 518 aa15.67■□□□□ 0.1
CHRNA1-204ENST00000409323 HIP1RO75146 1068 aa15.66■□□□□ 0.1
CHRNA1-204ENST00000409323 VTNP04004 478 aa15.66■□□□□ 0.1
CHRNA1-204ENST00000409323 CYP2C9P11712 490 aa15.66■□□□□ 0.1
CHRNA1-204ENST00000409323 IDEP14735 1019 aa15.66■□□□□ 0.1
CHRNA1-204ENST00000409323 ADAM17P78536 824 aa15.66■□□□□ 0.1
CHRNA1-204ENST00000409323 LRRC26Q2I0M4 334 aa15.66■□□□□ 0.1
CHRNA1-204ENST00000409323 NECAB2Q7Z6G3 386 aa15.66■□□□□ 0.1
CHRNA1-204ENST00000409323 KSR1Q8IVT5 923 aa15.66■□□□□ 0.1
CHRNA1-204ENST00000409323 ANKLE1Q8NAG6 615 aa15.66■□□□□ 0.1
CHRNA1-204ENST00000409323 DNAJB3Q8WWF6 145 aa15.66■□□□□ 0.1
CHRNA1-204ENST00000409323 SLC7A3Q8WY07 619 aa15.66■□□□□ 0.1
CHRNA1-204ENST00000409323 DHX33Q9H6R0 707 aaKnown RBP15.66■□□□□ 0.1
CHRNA1-204ENST00000409323 ATP11BQ9Y2G3 1177 aa15.66■□□□□ 0.1
CHRNA1-204ENST00000409323 COL1A2P08123 1366 aa15.66■□□□□ 0.1
CHRNA1-204ENST00000409323 RRN3P2A6NIE6 340 aa15.66■□□□□ 0.1
CHRNA1-204ENST00000409323 MAFO75444 373 aaPredicted RBP15.66■□□□□ 0.1
CHRNA1-204ENST00000409323 DGAT1O75907 488 aa15.66■□□□□ 0.1
CHRNA1-204ENST00000409323 ASIC1P78348 528 aa15.66■□□□□ 0.1
CHRNA1-204ENST00000409323 GIT2Q14161 759 aa15.66■□□□□ 0.1
CHRNA1-204ENST00000409323 CAVIN1Q6NZI2 390 aaKnown RBP15.66■□□□□ 0.1
CHRNA1-204ENST00000409323 HPS3Q969F9 1004 aa15.66■□□□□ 0.1
CHRNA1-204ENST00000409323 PYM1Q9BRP8 204 aaKnown RBP15.66■□□□□ 0.1
CHRNA1-204ENST00000409323 POLR3FQ9H1D9 316 aaPredicted RBP15.66■□□□□ 0.1
CHRNA1-204ENST00000409323 TNMDQ9H2S6 317 aa15.66■□□□□ 0.1
CHRNA1-204ENST00000409323 CUEDC2Q9H467 287 aa15.66■□□□□ 0.1
CHRNA1-204ENST00000409323 TBC1D7Q9P0N9 293 aa15.66■□□□□ 0.1
CHRNA1-204ENST00000409323 NOD1Q9Y239 953 aa15.66■□□□□ 0.1
CHRNA1-204ENST00000409323 HOXC8P31273 242 aa15.65■□□□□ 0.1
CHRNA1-204ENST00000409323 CDK7P50613 346 aa15.65■□□□□ 0.1
CHRNA1-204ENST00000409323 MAPK7Q13164 816 aa15.65■□□□□ 0.1
CHRNA1-204ENST00000409323 POSTNQ15063 836 aa15.65■□□□□ 0.1
CHRNA1-204ENST00000409323 ISM2Q6H9L7 571 aa15.65■□□□□ 0.1
CHRNA1-204ENST00000409323 SH3RF1Q7Z6J0 888 aa15.65■□□□□ 0.1
CHRNA1-204ENST00000409323 DAW1Q8N136 415 aa15.65■□□□□ 0.1
CHRNA1-204ENST00000409323 SLC43A3Q8NBI5 491 aa15.65■□□□□ 0.1
CHRNA1-204ENST00000409323 ASAP3Q8TDY4 903 aa15.65■□□□□ 0.1
CHRNA1-204ENST00000409323 BSNDQ8WZ55 320 aa15.65■□□□□ 0.1
CHRNA1-204ENST00000409323 TRIM9Q9C026 710 aa15.65■□□□□ 0.1
CHRNA1-204ENST00000409323 PDLIM7Q9NR12 457 aa15.65■□□□□ 0.1
CHRNA1-204ENST00000409323 TMEM63CQ9P1W3 806 aa15.65■□□□□ 0.1
CHRNA1-204ENST00000409323 USP25Q9UHP3 1055 aa15.65■□□□□ 0.1
CHRNA1-204ENST00000409323 AKT3Q9Y243 479 aa15.65■□□□□ 0.1
CHRNA1-204ENST00000409323 GINS2Q9Y248 185 aa15.65■□□□□ 0.1
CHRNA1-204ENST00000409323 ALPK3Q96L96 1907 aa15.64■□□□□ 0.09
CHRNA1-204ENST00000409323 MBLAC1A4D2B0 266 aaPredicted RBP15.64■□□□□ 0.09
CHRNA1-204ENST00000409323 MBD3O95983 291 aa15.64■□□□□ 0.09
CHRNA1-204ENST00000409323 CTSHP09668 335 aa15.64■□□□□ 0.09
CHRNA1-204ENST00000409323 GNAT1P11488 350 aa15.64■□□□□ 0.09
CHRNA1-204ENST00000409323 RFC5P40937 340 aa15.64■□□□□ 0.09
CHRNA1-204ENST00000409323 RTP1P59025 263 aa15.64■□□□□ 0.09
CHRNA1-204ENST00000409323 MDM2Q00987 491 aaPredicted RBP15.64■□□□□ 0.09
CHRNA1-204ENST00000409323 TLE2Q04725 743 aa15.64■□□□□ 0.09
CHRNA1-204ENST00000409323 SESTD1Q86VW0 696 aa15.64■□□□□ 0.09
CHRNA1-204ENST00000409323 RHPN2Q8IUC4 686 aa15.64■□□□□ 0.09
CHRNA1-204ENST00000409323 FAM126BQ8IXS8 530 aa15.64■□□□□ 0.09
CHRNA1-204ENST00000409323 DHX38Q92620 1227 aaKnown RBP15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms