RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 MRRFQ96E11 262 aaKnown RBP10.39□□□□□ -0.75
SMC1B-202ENST00000404354 MXD3Q9BW11 206 aa10.39□□□□□ -0.75
SMC1B-202ENST00000404354 CTNNAL1Q9UBT7 734 aa10.39□□□□□ -0.75
SMC1B-202ENST00000404354 COL18A1P39060 1754 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 A0A1B0GUA9 196 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 TRIM49P0CI25 452 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 TRIM49CP0CI26 452 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 MMP14P50281 582 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 SNX1Q13596 522 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 DCAF12L1Q5VU92 463 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 TBC1D9BQ66K14 1250 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 NUGGCQ68CJ6 796 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 NT5DC3Q86UY8 548 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 BTBD6Q96KE9 485 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 PWWP2AQ96N64 755 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 TRIM6Q9C030 488 aaPredicted RBP10.38□□□□□ -0.75
SMC1B-202ENST00000404354 ACP6Q9NPH0 428 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 AIPL1Q9NZN9 384 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 MYH1P12882 1939 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 MYH4Q9Y623 1939 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 PPIP5K2O43314 1243 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 MED24O75448 989 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 GCNT3O95395 438 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 CHRM1P11229 460 aaPredicted RBP10.38□□□□□ -0.75
SMC1B-202ENST00000404354 BTDP43251 543 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 CCNHP51946 323 aaPredicted RBP10.38□□□□□ -0.75
SMC1B-202ENST00000404354 MTMR3Q13615 1198 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 SBK1Q52WX2 424 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 GALNT17Q6IS24 598 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 ACTRT1Q8TDG2 376 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 ALG3Q92685 438 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 KRT35Q92764 455 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 IQCDQ96DY2 449 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 RSRC1Q96IZ7 334 aaKnown RBP10.38□□□□□ -0.75
SMC1B-202ENST00000404354 FAM129AQ9BZQ8 928 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 A1CFQ9NQ94 594 aaKnown RBP10.38□□□□□ -0.75
SMC1B-202ENST00000404354 TCRBV7S2A1N4TA0A589 114 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 TCP11X1B4DZS4 312 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 IGF2BP3O00425 579 aaKnown RBP eCLIP10.38□□□□□ -0.75
SMC1B-202ENST00000404354 ZBTB39O15060 712 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 EVI5O60447 810 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 AFPP02771 609 aaKnown RBP10.38□□□□□ -0.75
SMC1B-202ENST00000404354 POLD1P28340 1107 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 XRCC4Q13426 336 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 NFIXQ14938 502 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 ZC2HC1CQ53FD0 456 aaPredicted RBP10.38□□□□□ -0.75
SMC1B-202ENST00000404354 PIGOQ8TEQ8 1089 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 ATP8B4Q8TF62 1192 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 FAXDC2Q96IV6 333 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 FAM118BQ9BPY3 351 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 THAP2Q9H0W7 228 aa10.38□□□□□ -0.75
SMC1B-202ENST00000404354 NUCKS1Q9H1E3 243 aaKnown RBP10.38□□□□□ -0.75
SMC1B-202ENST00000404354 FAM196BA6NMK8 535 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 USP17L10C9JJH3 530 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 GH1P01241 217 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 CYP11B2P19099 503 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 CYP2J2P51589 502 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 ALDH5A1P51649 535 aaPredicted RBP10.37□□□□□ -0.75
SMC1B-202ENST00000404354 COG2Q14746 738 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 PRR16Q569H4 304 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 LRCH2Q5VUJ6 765 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 FAM47EQ6ZV65 393 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 TRPM8Q7Z2W7 1104 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 NBPF5PQ86XG9 351 aaPredicted RBP10.37□□□□□ -0.75
SMC1B-202ENST00000404354 NEK9Q8TD19 979 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 PAGR1Q9BTK6 254 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 DDX23Q9BUQ8 820 aaKnown RBP10.37□□□□□ -0.75
SMC1B-202ENST00000404354 ANKRD63C9JTQ0 380 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 CHMP2AO43633 222 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 MESDQ14696 234 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 PLCB4Q15147 1175 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 ARSHQ5FYA8 562 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 VPS36Q86VN1 386 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 LNX1Q8TBB1 728 aaPredicted RBP10.37□□□□□ -0.75
SMC1B-202ENST00000404354 KLHL29Q96CT2 875 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 KCTD10Q9H3F6 313 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 ECT2Q9H8V3 914 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 KIF9Q9HAQ2 790 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 ARHGEF10LQ9HCE6 1279 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 ATXN2Q99700 1313 aaKnown RBP10.37□□□□□ -0.75
SMC1B-202ENST00000404354 MYH3P11055 1940 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 MGRN1O60291 552 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 PPP1R11O60927 126 aaPredicted RBP10.37□□□□□ -0.75
SMC1B-202ENST00000404354 BAG3O95817 575 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 SLC8A1P32418 973 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 IFI16Q16666 785 aaKnown RBP10.37□□□□□ -0.75
SMC1B-202ENST00000404354 AGBL2Q5U5Z8 902 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 DPP8Q6V1X1 898 aaPredicted RBP10.37□□□□□ -0.75
SMC1B-202ENST00000404354 ERICH1Q86X53 443 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 JAMLQ86YT9 394 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 ZNF317Q96PQ6 595 aaPredicted RBP10.37□□□□□ -0.75
SMC1B-202ENST00000404354 YIPF3Q9GZM5 350 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 ADAM7Q9H2U9 754 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 SWAP70Q9UH65 585 aa10.37□□□□□ -0.75
SMC1B-202ENST00000404354 NUP98P52948 1817 aa10.36□□□□□ -0.75
SMC1B-202ENST00000404354 CCDC189A1A4V9 331 aa10.36□□□□□ -0.75
SMC1B-202ENST00000404354 FXR2P51116 673 aaKnown RBP eCLIP10.36□□□□□ -0.75
SMC1B-202ENST00000404354 SHROOM1Q2M3G4 852 aaPredicted RBP10.36□□□□□ -0.75
SMC1B-202ENST00000404354 HP1BP3Q5SSJ5 553 aaPredicted RBP10.36□□□□□ -0.75
SMC1B-202ENST00000404354 EMC10Q5UCC4 262 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms