RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 FRMPD4Q14CM0 1322 aa17.51■□□□□ 0.39
CHRFAM7A-203ENST00000401522 RPTORQ8N122 1335 aa17.51■□□□□ 0.39
CHRFAM7A-203ENST00000401522 SLC15A5A6NIM6 579 aa17.51■□□□□ 0.39
CHRFAM7A-203ENST00000401522 EDIL3O43854 480 aa17.51■□□□□ 0.39
CHRFAM7A-203ENST00000401522 SREBF1P36956 1147 aa17.51■□□□□ 0.39
CHRFAM7A-203ENST00000401522 EHHADHQ08426 723 aa17.51■□□□□ 0.39
CHRFAM7A-203ENST00000401522 DNERQ8NFT8 737 aa17.51■□□□□ 0.39
CHRFAM7A-203ENST00000401522 TRIM58Q8NG06 486 aa17.51■□□□□ 0.39
CHRFAM7A-203ENST00000401522 RMDN3Q96TC7 470 aa17.51■□□□□ 0.39
CHRFAM7A-203ENST00000401522 BEGAINQ9BUH8 593 aa17.51■□□□□ 0.39
CHRFAM7A-203ENST00000401522 WBP1LQ9NX94 342 aa17.51■□□□□ 0.39
CHRFAM7A-203ENST00000401522 CEP350Q5VT06 3117 aa17.51■□□□□ 0.39
CHRFAM7A-203ENST00000401522 GPR25O00155 361 aa17.51■□□□□ 0.39
CHRFAM7A-203ENST00000401522 TACC1O75410 805 aa17.51■□□□□ 0.39
CHRFAM7A-203ENST00000401522 LCA5LO95447 670 aa17.51■□□□□ 0.39
CHRFAM7A-203ENST00000401522 ADORA2AP29274 412 aa17.51■□□□□ 0.39
CHRFAM7A-203ENST00000401522 USP11P51784 963 aa17.51■□□□□ 0.39
CHRFAM7A-203ENST00000401522 CNTN2Q02246 1040 aa17.51■□□□□ 0.39
CHRFAM7A-203ENST00000401522 HSP90B2PQ58FF3 399 aa17.51■□□□□ 0.39
CHRFAM7A-203ENST00000401522 NEK11Q8NG66 645 aa17.51■□□□□ 0.39
CHRFAM7A-203ENST00000401522 CAGE1Q8TC20 777 aa17.51■□□□□ 0.39
CHRFAM7A-203ENST00000401522 FAM71BQ8TC56 605 aa17.51■□□□□ 0.39
CHRFAM7A-203ENST00000401522 NSUN6Q8TEA1 469 aaKnown RBP17.51■□□□□ 0.39
CHRFAM7A-203ENST00000401522 NAP1L4Q99733 375 aaKnown RBP17.51■□□□□ 0.39
CHRFAM7A-203ENST00000401522 EHMT1Q9H9B1 1298 aa17.51■□□□□ 0.39
CHRFAM7A-203ENST00000401522 SUGCTQ9HAC7 445 aa17.51■□□□□ 0.39
CHRFAM7A-203ENST00000401522 MED4Q9NPJ6 270 aa17.51■□□□□ 0.39
CHRFAM7A-203ENST00000401522 SRGAP2O75044 1071 aa17.5■□□□□ 0.39
CHRFAM7A-203ENST00000401522 PGK2P07205 417 aa17.5■□□□□ 0.39
CHRFAM7A-203ENST00000401522 IDEP14735 1019 aa17.5■□□□□ 0.39
CHRFAM7A-203ENST00000401522 GCFC2P16383 781 aaKnown RBP17.5■□□□□ 0.39
CHRFAM7A-203ENST00000401522 CTGFP29279 349 aa17.5■□□□□ 0.39
CHRFAM7A-203ENST00000401522 CYP27A1Q02318 531 aa17.5■□□□□ 0.39
CHRFAM7A-203ENST00000401522 MORN1Q5T089 497 aa17.5■□□□□ 0.39
CHRFAM7A-203ENST00000401522 LRRC55Q6ZSA7 311 aa17.5■□□□□ 0.39
CHRFAM7A-203ENST00000401522 DYMQ7RTS9 669 aa17.5■□□□□ 0.39
CHRFAM7A-203ENST00000401522 IFIH1Q9BYX4 1025 aaKnown RBP17.5■□□□□ 0.39
CHRFAM7A-203ENST00000401522 PXMP2Q9NR77 195 aa17.5■□□□□ 0.39
CHRFAM7A-203ENST00000401522 JRKLQ9Y4A0 524 aa17.5■□□□□ 0.39
CHRFAM7A-203ENST00000401522 PCDHA13Q9Y5I0 950 aa17.5■□□□□ 0.39
CHRFAM7A-203ENST00000401522 PLXNB2O15031 1838 aa17.5■□□□□ 0.39
CHRFAM7A-203ENST00000401522 ZNFX1Q9P2E3 1918 aaKnown RBP17.5■□□□□ 0.39
CHRFAM7A-203ENST00000401522 POTEMA6NI47 508 aa17.49■□□□□ 0.39
CHRFAM7A-203ENST00000401522 SLC26A4O43511 780 aa17.49■□□□□ 0.39
CHRFAM7A-203ENST00000401522 CYP3A4P08684 503 aa17.49■□□□□ 0.39
CHRFAM7A-203ENST00000401522 FCGRTP55899 365 aa17.49■□□□□ 0.39
CHRFAM7A-203ENST00000401522 ARHGAP4P98171 946 aa17.49■□□□□ 0.39
CHRFAM7A-203ENST00000401522 ARHGEF16Q5VV41 709 aa17.49■□□□□ 0.39
CHRFAM7A-203ENST00000401522 DDX12PQ92771 950 aa17.49■□□□□ 0.39
CHRFAM7A-203ENST00000401522 CAPZA3Q96KX2 299 aa17.49■□□□□ 0.39
CHRFAM7A-203ENST00000401522 VPS18Q9P253 973 aa17.49■□□□□ 0.39
CHRFAM7A-203ENST00000401522 ARHGAP20Q9P2F6 1191 aa17.49■□□□□ 0.39
CHRFAM7A-203ENST00000401522 ZNF236Q9UL36 1845 aa17.49■□□□□ 0.39
CHRFAM7A-203ENST00000401522 LCTP09848 1927 aa17.49■□□□□ 0.39
CHRFAM7A-203ENST00000401522 MACROD2A1Z1Q3 448 aa17.49■□□□□ 0.39
CHRFAM7A-203ENST00000401522 SOWAHBA6NEL2 793 aa17.49■□□□□ 0.39
CHRFAM7A-203ENST00000401522 TNPO2O14787 897 aaKnown RBP17.49■□□□□ 0.39
CHRFAM7A-203ENST00000401522 ZNF263O14978 683 aa17.49■□□□□ 0.39
CHRFAM7A-203ENST00000401522 PRLRP16471 622 aa17.49■□□□□ 0.39
CHRFAM7A-203ENST00000401522 PSMC4P43686 418 aa17.49■□□□□ 0.39
CHRFAM7A-203ENST00000401522 KIF11P52732 1056 aa17.49■□□□□ 0.39
CHRFAM7A-203ENST00000401522 HNRNPH2P55795 449 aaKnown RBP17.49■□□□□ 0.39
CHRFAM7A-203ENST00000401522 ZNF792Q3KQV3 632 aa17.49■□□□□ 0.39
CHRFAM7A-203ENST00000401522 IWS1Q96ST2 819 aa17.49■□□□□ 0.39
CHRFAM7A-203ENST00000401522 PDCD2LQ9BRP1 358 aa17.49■□□□□ 0.39
CHRFAM7A-203ENST00000401522 MMRN2Q9H8L6 949 aa17.49■□□□□ 0.39
CHRFAM7A-203ENST00000401522 FAM207AQ9NSI2 230 aaPredicted RBP17.49■□□□□ 0.39
CHRFAM7A-203ENST00000401522 DDX25Q9UHL0 483 aaKnown RBP17.49■□□□□ 0.39
CHRFAM7A-203ENST00000401522 GJD2Q9UKL4 321 aa17.49■□□□□ 0.39
CHRFAM7A-203ENST00000401522 DIS3Q9Y2L1 958 aaKnown RBP17.49■□□□□ 0.39
CHRFAM7A-203ENST00000401522 ASTN1O14525 1302 aa17.48■□□□□ 0.39
CHRFAM7A-203ENST00000401522 KDM3AQ9Y4C1 1321 aa17.48■□□□□ 0.39
CHRFAM7A-203ENST00000401522 LOC102724159A0A0B4J2E5 919 aa17.48■□□□□ 0.39
CHRFAM7A-203ENST00000401522 EIF4A3P38919 411 aaKnown RBP17.48■□□□□ 0.39
CHRFAM7A-203ENST00000401522 ITIH3Q06033 890 aa17.48■□□□□ 0.39
CHRFAM7A-203ENST00000401522 KIF22Q14807 665 aa17.48■□□□□ 0.39
CHRFAM7A-203ENST00000401522 PGM5Q15124 567 aa17.48■□□□□ 0.39
CHRFAM7A-203ENST00000401522 PWP2Q15269 919 aaKnown RBP17.48■□□□□ 0.39
CHRFAM7A-203ENST00000401522 PCNX4Q63HM2 1172 aa17.48■□□□□ 0.39
CHRFAM7A-203ENST00000401522 CCDC70Q6NSX1 233 aa17.48■□□□□ 0.39
CHRFAM7A-203ENST00000401522 ZNF572Q7Z3I7 529 aaPredicted RBP17.48■□□□□ 0.39
CHRFAM7A-203ENST00000401522 MYOCDQ8IZQ8 938 aa17.48■□□□□ 0.39
CHRFAM7A-203ENST00000401522 RUBCNQ92622 972 aa17.48■□□□□ 0.39
CHRFAM7A-203ENST00000401522 USP6NLQ92738 828 aa17.48■□□□□ 0.39
CHRFAM7A-203ENST00000401522 NUDT12Q9BQG2 462 aa17.48■□□□□ 0.39
CHRFAM7A-203ENST00000401522 DEF6Q9H4E7 631 aa17.48■□□□□ 0.39
CHRFAM7A-203ENST00000401522 JADE2Q9NQC1 790 aa17.48■□□□□ 0.39
CHRFAM7A-203ENST00000401522 SNX12Q9UMY4 172 aa17.48■□□□□ 0.39
CHRFAM7A-203ENST00000401522 DUSP10Q9Y6W6 482 aa17.48■□□□□ 0.39
CHRFAM7A-203ENST00000401522 MGAMO43451 1857 aa17.48■□□□□ 0.39
CHRFAM7A-203ENST00000401522 MYH7BA7E2Y1 1941 aa17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 NKRFO15226 690 aaKnown RBP eCLIP17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 PLEKP08567 350 aaPredicted RBP17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 EIF2AK2P19525 551 aaKnown RBP17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 CIITAP33076 1130 aa17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 AARSP49588 968 aaKnown RBP eCLIP17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 ALDH5A1P51649 535 aaPredicted RBP17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 HYIQ5T013 277 aa17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 XRRA1Q6P2D8 792 aa17.47■□□□□ 0.39
CHRFAM7A-203ENST00000401522 DPP9Q86TI2 863 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms