RNA–Protein interactions for RNA: ENST00000400337.6

COL18A1-204, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL18A1, Length 5,436 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-204ENST00000400337 GPC4O75487 556 aa19.56■□□□□ 0.72
COL18A1-204ENST00000400337 PSMA2P25787 234 aa19.56■□□□□ 0.72
COL18A1-204ENST00000400337 ASPHQ12797 758 aa19.56■□□□□ 0.72
COL18A1-204ENST00000400337 OSBPL5Q9H0X9 879 aaPredicted RBP19.56■□□□□ 0.72
COL18A1-204ENST00000400337 RBBP5Q15291 538 aaKnown RBP19.55■□□□□ 0.72
COL18A1-204ENST00000400337 ZNF34Q8IZ26 560 aa19.55■□□□□ 0.72
COL18A1-204ENST00000400337 MIPOL1Q8TD10 442 aa19.55■□□□□ 0.72
COL18A1-204ENST00000400337 FAM167AQ96KS9 214 aa19.55■□□□□ 0.72
COL18A1-204ENST00000400337 E9PCH4 1651 aa19.55■□□□□ 0.72
COL18A1-204ENST00000400337 NGRNQ9NPE2 291 aaKnown RBP19.55■□□□□ 0.72
COL18A1-204ENST00000400337 EXOC1LA0A1B0GW35 172 aa19.55■□□□□ 0.72
COL18A1-204ENST00000400337 SESN3P58005 492 aa19.55■□□□□ 0.72
COL18A1-204ENST00000400337 SWSAP1Q6NVH7 229 aa19.55■□□□□ 0.72
COL18A1-204ENST00000400337 GABBR1Q9UBS5 961 aa19.55■□□□□ 0.72
COL18A1-204ENST00000400337 MT-ND3P03897 115 aa19.55■□□□□ 0.72
COL18A1-204ENST00000400337 FCER1AP12319 257 aa19.55■□□□□ 0.72
COL18A1-204ENST00000400337 PASD1Q8IV76 773 aa19.55■□□□□ 0.72
COL18A1-204ENST00000400337 HSPH1Q92598 858 aa19.55■□□□□ 0.72
COL18A1-204ENST00000400337 LXNQ9BS40 222 aa19.55■□□□□ 0.72
COL18A1-204ENST00000400337 ZMYND12Q9H0C1 365 aa19.55■□□□□ 0.72
COL18A1-204ENST00000400337 KIAA1841Q6NSI8 718 aa19.54■□□□□ 0.72
COL18A1-204ENST00000400337 CLEC17AQ6ZS10 378 aa19.54■□□□□ 0.72
COL18A1-204ENST00000400337 GUF1Q8N442 669 aaKnown RBP19.54■□□□□ 0.72
COL18A1-204ENST00000400337 TBC1D16Q8TBP0 767 aa19.54■□□□□ 0.72
COL18A1-204ENST00000400337 KIAA1586Q9HCI6 787 aa19.54■□□□□ 0.72
COL18A1-204ENST00000400337 SLC12A6Q9UHW9 1150 aa19.54■□□□□ 0.72
COL18A1-204ENST00000400337 CEP152O94986 1710 aa19.54■□□□□ 0.72
COL18A1-204ENST00000400337 TTC26A0AVF1 554 aa19.54■□□□□ 0.72
COL18A1-204ENST00000400337 SEPT6Q14141 434 aa19.54■□□□□ 0.72
COL18A1-204ENST00000400337 TYW5A2RUC4 315 aaKnown RBP19.54■□□□□ 0.72
COL18A1-204ENST00000400337 ALS2CLQ60I27 953 aa19.54■□□□□ 0.72
COL18A1-204ENST00000400337 DSTYKQ6XUX3 929 aa19.54■□□□□ 0.72
COL18A1-204ENST00000400337 CCDC188H7C350 402 aa19.54■□□□□ 0.72
COL18A1-204ENST00000400337 ZBED1O96006 694 aa19.54■□□□□ 0.72
COL18A1-204ENST00000400337 RCN2Q14257 317 aa19.54■□□□□ 0.72
COL18A1-204ENST00000400337 TMEM270Q6UE05 265 aa19.54■□□□□ 0.72
COL18A1-204ENST00000400337 GIMAP8Q8ND71 665 aaPredicted RBP19.54■□□□□ 0.72
COL18A1-204ENST00000400337 FBXO2Q9UK22 296 aaPredicted RBP19.54■□□□□ 0.72
COL18A1-204ENST00000400337 ZBTB24O43167 697 aaPredicted RBP19.54■□□□□ 0.72
COL18A1-204ENST00000400337 SLC4A1P02730 911 aa19.54■□□□□ 0.72
COL18A1-204ENST00000400337 IGDCC4Q8TDY8 1250 aa19.54■□□□□ 0.72
COL18A1-204ENST00000400337 SART1O43290 800 aaKnown RBP19.53■□□□□ 0.72
COL18A1-204ENST00000400337 CSF1RP07333 972 aa19.53■□□□□ 0.72
COL18A1-204ENST00000400337 SFNP31947 248 aa19.53■□□□□ 0.72
COL18A1-204ENST00000400337 USP11P51784 963 aa19.53■□□□□ 0.72
COL18A1-204ENST00000400337 CUL1Q13616 776 aa19.53■□□□□ 0.72
COL18A1-204ENST00000400337 EIF2AK1Q9BQI3 630 aaKnown RBP19.53■□□□□ 0.72
COL18A1-204ENST00000400337 ZNF302Q9NR11 478 aa19.53■□□□□ 0.72
COL18A1-204ENST00000400337 FAM205CA6NFA0 338 aa19.53■□□□□ 0.72
COL18A1-204ENST00000400337 CAMTA2O94983 1202 aa19.53■□□□□ 0.72
COL18A1-204ENST00000400337 SF3B3Q15393 1217 aaKnown RBP19.53■□□□□ 0.72
COL18A1-204ENST00000400337 MMEL1Q495T6 779 aa19.53■□□□□ 0.72
COL18A1-204ENST00000400337 CPSF3Q9UKF6 684 aaKnown RBP19.53■□□□□ 0.72
COL18A1-204ENST00000400337 DAGLAQ9Y4D2 1042 aa19.53■□□□□ 0.72
COL18A1-204ENST00000400337 ACSL3O95573 720 aa19.53■□□□□ 0.72
COL18A1-204ENST00000400337 RFX1P22670 979 aa19.53■□□□□ 0.72
COL18A1-204ENST00000400337 METTL16Q86W50 562 aaKnown RBP19.53■□□□□ 0.72
COL18A1-204ENST00000400337 TRIM56Q9BRZ2 755 aaKnown RBP19.53■□□□□ 0.72
COL18A1-204ENST00000400337 VAMP7P51809 220 aa19.53■□□□□ 0.72
COL18A1-204ENST00000400337 GPC5P78333 572 aa19.53■□□□□ 0.72
COL18A1-204ENST00000400337 ZNF568Q3ZCX4 644 aa19.53■□□□□ 0.72
COL18A1-204ENST00000400337 TRIM68Q6AZZ1 485 aa19.53■□□□□ 0.72
COL18A1-204ENST00000400337 EMBQ6PCB8 327 aa19.53■□□□□ 0.72
COL18A1-204ENST00000400337 NR1D1P20393 614 aa19.52■□□□□ 0.72
COL18A1-204ENST00000400337 CFAP36Q96G28 342 aa19.52■□□□□ 0.72
COL18A1-204ENST00000400337 MTRQ99707 1265 aa19.52■□□□□ 0.72
COL18A1-204ENST00000400337 HERC5Q9UII4 1024 aaKnown RBP19.52■□□□□ 0.72
COL18A1-204ENST00000400337 GOLGA8CPA6NN73 597 aa19.52■□□□□ 0.72
COL18A1-204ENST00000400337 PDIK1LQ8N165 341 aa19.52■□□□□ 0.72
COL18A1-204ENST00000400337 TMEM35BQ8NCS4 154 aa19.52■□□□□ 0.72
COL18A1-204ENST00000400337 ABT1Q9ULW3 272 aaKnown RBP19.52■□□□□ 0.72
COL18A1-204ENST00000400337 MYL3P08590 195 aa19.52■□□□□ 0.72
COL18A1-204ENST00000400337 CHRNA5P30532 468 aa19.52■□□□□ 0.72
COL18A1-204ENST00000400337 ZNF699Q32M78 642 aa19.52■□□□□ 0.72
COL18A1-204ENST00000400337 NAALADL2Q58DX5 795 aa19.52■□□□□ 0.72
COL18A1-204ENST00000400337 HEMGNQ9BXL5 484 aa19.52■□□□□ 0.72
COL18A1-204ENST00000400337 SNX24Q9Y343 169 aa19.52■□□□□ 0.72
COL18A1-204ENST00000400337 ARHGEF37A1IGU5 675 aa19.52■□□□□ 0.71
COL18A1-204ENST00000400337 MYCP01106 439 aaPredicted RBP19.52■□□□□ 0.71
COL18A1-204ENST00000400337 IRX4P78413 519 aa19.52■□□□□ 0.71
COL18A1-204ENST00000400337 PPP6R3Q5H9R7 873 aaPredicted RBP19.52■□□□□ 0.71
COL18A1-204ENST00000400337 JADE1Q6IE81 842 aa19.52■□□□□ 0.71
COL18A1-204ENST00000400337 RYBPQ8N488 228 aaPredicted RBP19.52■□□□□ 0.71
COL18A1-204ENST00000400337 RNF139Q8WU17 664 aa19.52■□□□□ 0.71
COL18A1-204ENST00000400337 SEL1LQ9UBV2 794 aa19.52■□□□□ 0.71
COL18A1-204ENST00000400337 MIF4GDA9UHW6 222 aaKnown RBP19.51■□□□□ 0.71
COL18A1-204ENST00000400337 CSPG5O95196 566 aa19.51■□□□□ 0.71
COL18A1-204ENST00000400337 PSPC1Q8WXF1 523 aaKnown RBP19.51■□□□□ 0.71
COL18A1-204ENST00000400337 SUGT1Q9Y2Z0 365 aa19.51■□□□□ 0.71
COL18A1-204ENST00000400337 USP27XA6NNY8 438 aa19.51■□□□□ 0.71
COL18A1-204ENST00000400337 PSMC5P62195 406 aa19.51■□□□□ 0.71
COL18A1-204ENST00000400337 DRAP1Q14919 205 aaPredicted RBP19.51■□□□□ 0.71
COL18A1-204ENST00000400337 TRIM42Q8IWZ5 723 aa19.51■□□□□ 0.71
COL18A1-204ENST00000400337 PYROXD1Q8WU10 500 aa19.51■□□□□ 0.71
COL18A1-204ENST00000400337 SAAL1Q96ER3 474 aa19.51■□□□□ 0.71
COL18A1-204ENST00000400337 CNOT10Q9H9A5 744 aaKnown RBP19.51■□□□□ 0.71
COL18A1-204ENST00000400337 MTMR4Q9NYA4 1195 aa19.51■□□□□ 0.71
COL18A1-204ENST00000400337 PNMA6AP0CW24 399 aaPredicted RBP19.51■□□□□ 0.71
COL18A1-204ENST00000400337 EIF3BP55884 814 aaKnown RBP19.51■□□□□ 0.71
COL18A1-204ENST00000400337 TSTA3Q13630 321 aaPredicted RBP19.51■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms