RNA–Protein interactions for RNA: ENST00000399655.5

CACNA1C-220, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1C, Length 13,433 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-220ENST00000399655 EXOC8Q8IYI6 725 aa9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 CCDC185Q8N715 623 aa9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 TRIM10Q9UDY6 481 aa9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 MAGEA1P43355 309 aa9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 EPM2AIP1Q7L775 607 aaPredicted RBP9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 SYTL5Q8TDW5 730 aaPredicted RBP9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 DNAJC3Q13217 504 aa9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 RAB11FIP2Q7L804 512 aa9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 SAMD3Q8N6K7 520 aa9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 CRELD1Q96HD1 420 aa9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 SRPRBQ9Y5M8 271 aaKnown RBP9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 SNUPNO95149 360 aaKnown RBP9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 RCVRNP35243 200 aa9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 P4HA2O15460 535 aa9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 RPS6KA3P51812 740 aa9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 WDR48Q8TAF3 677 aa9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 FAF2Q96CS3 445 aa9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 CMTM5Q96DZ9 223 aa9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 BOLA2Q9H3K6 86 aa9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 SMCO1Q147U7 214 aa9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 OCLNQ16625 522 aa9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 C4orf46Q504U0 113 aa9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 SNIP1Q8TAD8 396 aaKnown RBP9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 PCDHGA3Q9Y5H0 932 aa9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 FAM92AA1XBS5 289 aa9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 CAMK1Q14012 370 aa9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 RNF219Q5W0B1 726 aaPredicted RBP9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 LZTS2Q9BRK4 669 aa9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 VPS54Q9P1Q0 977 aa9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 CUX2O14529 1486 aa9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 MYO1CO00159 1063 aa9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 STX11O75558 287 aa9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 PKN3Q6P5Z2 889 aa9.13□□□□□ -0.95
CACNA1C-220ENST00000399655 H3BMM5 538 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 MAGEA10P43363 369 aaPredicted RBP9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 DPYDQ12882 1025 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 VPS33AQ96AX1 596 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 ST7Q9NRC1 585 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 MYCP01106 439 aaPredicted RBP9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 TNNI1P19237 187 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 PIK3CBP42338 1070 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 CALML6Q8TD86 181 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 VPS8Q8N3P4 1428 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 NLRP11P59045 1033 aaKnown RBP9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 SPIRE1Q08AE8 756 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 ILF3Q12906 894 aaKnown RBP eCLIP9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 LBRQ14739 615 aaKnown RBP9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 KPNB1Q14974 876 aaKnown RBP9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 HIBCHQ6NVY1 386 aaPredicted RBP9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 ARL8AQ96BM9 186 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 SH3BP4Q9P0V3 963 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 PDP2Q9P2J9 529 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 G3V2T6 193 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 SERPINB3P29508 390 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 BNC1Q01954 994 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 PDZK1Q5T2W1 519 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 APOA5Q6Q788 366 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 SLC9A6Q92581 669 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 HAUS4Q9H6D7 363 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 DACT1Q9NYF0 836 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 DNAJC12Q9UKB3 198 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 APPL1Q9UKG1 709 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 IVNS1ABPQ9Y6Y0 642 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 SMARCA5O60264 1052 aaPredicted RBP9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 ZNF530Q6P9A1 599 aaPredicted RBP9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 MINDY2Q8NBR6 621 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 HACD3Q9P035 362 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 BCAR3O75815 825 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 DLG1Q12959 904 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 CHRNA2Q15822 529 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 MCMDC2Q4G0Z9 681 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 BEND3Q5T5X7 828 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 WLSQ5T9L3 541 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 RSRC2Q7L4I2 434 aaKnown RBP9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 ARHGEF25Q86VW2 580 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 HIC2Q96JB3 615 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 SMYD3Q9H7B4 428 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 HERC5Q9UII4 1024 aaKnown RBP9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 CLCA2Q9UQC9 943 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 SPDYE5A6NIY4 337 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 LAMB3Q13751 1172 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 SPDYE7PQ495Y7 208 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 WASHC2DQ5SRD0 308 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 SCFD1Q8WVM8 642 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 ARHGEF10LQ9HCE6 1279 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 PA2G4Q9UQ80 394 aaKnown RBP9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 ANKRD6Q9Y2G4 727 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 EPHB1P54762 984 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 TPTE2Q6XPS3 522 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 CCDC28BQ9BUN5 200 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 NKTRP30414 1462 aaKnown RBP9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 KPNA4O00629 521 aaPredicted RBP9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 ARF5P84085 180 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 CAV1Q03135 178 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 MXD4Q14582 209 aaPredicted RBP9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 PITPNM3Q9BZ71 974 aa9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 GCOM2Q9BZD3 368 aaPredicted RBP9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 MAP3K20Q9NYL2 800 aaKnown RBP9.12□□□□□ -0.95
CACNA1C-220ENST00000399655 GIT1Q9Y2X7 761 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms