RNA–Protein interactions for RNA: ENST00000399603.5

CACNA1C-209, Transcript of calcium voltage-gated channel subunit alpha1 C, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-209ENST00000399603 MAPKAPK5Q8IW41 473 aa13.35□□□□□ -0.27
CACNA1C-209ENST00000399603 SPATA5Q8NB90 893 aa13.35□□□□□ -0.27
CACNA1C-209ENST00000399603 APPBP2Q92624 585 aa13.35□□□□□ -0.27
CACNA1C-209ENST00000399603 PKD2L2Q9NZM6 624 aa13.35□□□□□ -0.27
CACNA1C-209ENST00000399603 N4BP1O75113 896 aaKnown RBP13.35□□□□□ -0.27
CACNA1C-209ENST00000399603 ARF5P84085 180 aa13.35□□□□□ -0.27
CACNA1C-209ENST00000399603 CDO1Q16878 200 aa13.35□□□□□ -0.27
CACNA1C-209ENST00000399603 TADA2BQ86TJ2 420 aa13.35□□□□□ -0.27
CACNA1C-209ENST00000399603 ZNF555Q8NEP9 628 aa13.35□□□□□ -0.27
CACNA1C-209ENST00000399603 ST13P5Q8NFI4 369 aaPredicted RBP13.35□□□□□ -0.27
CACNA1C-209ENST00000399603 RABGGTAQ92696 567 aa13.35□□□□□ -0.27
CACNA1C-209ENST00000399603 ARL8AQ96BM9 186 aa13.35□□□□□ -0.27
CACNA1C-209ENST00000399603 DEPDC7Q96QD5 511 aa13.35□□□□□ -0.27
CACNA1C-209ENST00000399603 ARPP21Q9UBL0 812 aaPredicted RBP13.35□□□□□ -0.27
CACNA1C-209ENST00000399603 MYL1P05976 194 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 ZNF18P17022 549 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 CNGA3Q16281 694 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 KRT73Q86Y46 540 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 KBTBD3Q8NAB2 608 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 SH3KBP1Q96B97 665 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 ECT2Q9H8V3 914 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 CLCA2Q9UQC9 943 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 MTRF1O75570 445 aaKnown RBP13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 MAGEA9P43362 315 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 DMP1Q13316 513 aaPredicted RBP13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 ADCK5Q3MIX3 580 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 DDIASQ8IXT1 998 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 COG1Q8WTW3 980 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 LPIN2Q92539 896 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 VPS39Q96JC1 886 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 SELENONQ9NZV5 590 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 ANGEL1Q9UNK9 670 aaKnown RBP13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 CFAP43Q8NDM7 1665 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 ZFYVE16Q7Z3T8 1539 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 APOA4P06727 396 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 SPARCL1Q14515 664 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 NUP93Q8N1F7 819 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 DHX38Q92620 1227 aaKnown RBP13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 ABCC4O15439 1325 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 GOLGA8MH3BSY2 632 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 CLK1P49759 484 aaKnown RBP13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 RARS2Q5T160 578 aaKnown RBP13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 KRT40Q6A162 431 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 FANCLQ9NW38 375 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 CDC23Q9UJX2 597 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 KIAA0232Q92628 1395 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 RGS5O15539 181 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 COPB1P53618 953 aaKnown RBP13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 DTX3LQ8TDB6 740 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 PPP1R13BQ96KQ4 1090 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 NT5C3AQ9H0P0 336 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 NSMCE4AQ9NXX6 385 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 SLC8A2Q9UPR5 921 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 FAF2Q96CS3 445 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 EGFL8Q99944 293 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 RAD18Q9NS91 495 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 SENP1Q9P0U3 644 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 SEL1LQ9UBV2 794 aa13.34□□□□□ -0.27
CACNA1C-209ENST00000399603 MAGI2Q86UL8 1455 aa13.33□□□□□ -0.27
CACNA1C-209ENST00000399603 MYO1CO00159 1063 aa13.33□□□□□ -0.27
CACNA1C-209ENST00000399603 POLGP54098 1239 aaPredicted RBP13.33□□□□□ -0.27
CACNA1C-209ENST00000399603 C16orf62Q7Z3J2 963 aa13.33□□□□□ -0.27
CACNA1C-209ENST00000399603 EAF2Q96CJ1 260 aaPredicted RBP13.33□□□□□ -0.27
CACNA1C-209ENST00000399603 KLHL25Q9H0H3 589 aa13.33□□□□□ -0.27
CACNA1C-209ENST00000399603 ZWILCHQ9H900 591 aa13.33□□□□□ -0.27
CACNA1C-209ENST00000399603 H2AFY2Q9P0M6 372 aaPredicted RBP13.33□□□□□ -0.27
CACNA1C-209ENST00000399603 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.33□□□□□ -0.27
CACNA1C-209ENST00000399603 TRIM33Q9UPN9 1127 aa13.33□□□□□ -0.27
CACNA1C-209ENST00000399603 BLMP54132 1417 aaPredicted RBP13.33□□□□□ -0.27
CACNA1C-209ENST00000399603 ZNF532Q9HCE3 1301 aa13.33□□□□□ -0.27
CACNA1C-209ENST00000399603 NEK8Q86SG6 692 aa13.33□□□□□ -0.28
CACNA1C-209ENST00000399603 NEK9Q8TD19 979 aa13.33□□□□□ -0.28
CACNA1C-209ENST00000399603 FMO2Q99518 471 aa13.33□□□□□ -0.28
CACNA1C-209ENST00000399603 LSG1Q9H089 658 aaKnown RBP13.33□□□□□ -0.28
CACNA1C-209ENST00000399603 ROBO2Q9HCK4 1378 aa13.33□□□□□ -0.28
CACNA1C-209ENST00000399603 M0R3G1 203 aa13.33□□□□□ -0.28
CACNA1C-209ENST00000399603 IL10P22301 178 aa13.33□□□□□ -0.28
CACNA1C-209ENST00000399603 FAM182BQ5T319 152 aa13.33□□□□□ -0.28
CACNA1C-209ENST00000399603 C1orf228Q6PIY5 440 aa13.33□□□□□ -0.28
CACNA1C-209ENST00000399603 TMEM87BQ96K49 555 aa13.33□□□□□ -0.28
CACNA1C-209ENST00000399603 DNAJC7Q99615 494 aa13.33□□□□□ -0.28
CACNA1C-209ENST00000399603 PRPF18Q99633 342 aaKnown RBP13.33□□□□□ -0.28
CACNA1C-209ENST00000399603 COPS2P61201 443 aa13.33□□□□□ -0.28
CACNA1C-209ENST00000399603 LRRC24Q50LG9 513 aa13.33□□□□□ -0.28
CACNA1C-209ENST00000399603 REXO1Q8N1G1 1221 aaKnown RBP13.33□□□□□ -0.28
CACNA1C-209ENST00000399603 CLEC4FQ8N1N0 589 aa13.33□□□□□ -0.28
CACNA1C-209ENST00000399603 GLT8D2Q9H1C3 349 aa13.33□□□□□ -0.28
CACNA1C-209ENST00000399603 CCDC78A2IDD5 438 aa13.33□□□□□ -0.28
CACNA1C-209ENST00000399603 JAK2O60674 1132 aa13.33□□□□□ -0.28
CACNA1C-209ENST00000399603 RASSF9O75901 435 aa13.33□□□□□ -0.28
CACNA1C-209ENST00000399603 SERPINB3P29508 390 aa13.33□□□□□ -0.28
CACNA1C-209ENST00000399603 PPARGP37231 505 aaPredicted RBP13.33□□□□□ -0.28
CACNA1C-209ENST00000399603 SLC16A1P53985 500 aa13.33□□□□□ -0.28
CACNA1C-209ENST00000399603 PGRMC1O00264 195 aaKnown RBP13.33□□□□□ -0.28
CACNA1C-209ENST00000399603 ZBED1O96006 694 aa13.33□□□□□ -0.28
CACNA1C-209ENST00000399603 CASP14P31944 242 aa13.33□□□□□ -0.28
CACNA1C-209ENST00000399603 MFAP3P55082 362 aa13.33□□□□□ -0.28
CACNA1C-209ENST00000399603 KIAA1841Q6NSI8 718 aa13.33□□□□□ -0.28
CACNA1C-209ENST00000399603 DPP8Q6V1X1 898 aaPredicted RBP13.33□□□□□ -0.28
CACNA1C-209ENST00000399603 BNIPLQ7Z465 357 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms