RNA–Protein interactions for RNA: ENST00000399275.6

SMAD9-203, Transcript of SMAD family member 9, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMAD9, Length 5,389 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-203ENST00000399275 MPP6Q9NZW5 540 aa10.27□□□□□ -0.77
SMAD9-203ENST00000399275 ITM2BQ9Y287 266 aa10.27□□□□□ -0.77
SMAD9-203ENST00000399275 QRICH2Q9H0J4 1663 aa10.27□□□□□ -0.77
SMAD9-203ENST00000399275 PASKQ96RG2 1323 aa10.27□□□□□ -0.77
SMAD9-203ENST00000399275 GRID2IPA4D2P6 1211 aa10.27□□□□□ -0.77
SMAD9-203ENST00000399275 NFIBO00712 420 aa10.27□□□□□ -0.77
SMAD9-203ENST00000399275 GCP02774 474 aa10.27□□□□□ -0.77
SMAD9-203ENST00000399275 RECQLP46063 649 aaPredicted RBP10.27□□□□□ -0.77
SMAD9-203ENST00000399275 CCT3P49368 545 aaKnown RBP10.27□□□□□ -0.77
SMAD9-203ENST00000399275 TUFMP49411 452 aaKnown RBP10.27□□□□□ -0.77
SMAD9-203ENST00000399275 SLC7A5Q01650 507 aa10.27□□□□□ -0.77
SMAD9-203ENST00000399275 TTLL7Q6ZT98 887 aa10.27□□□□□ -0.77
SMAD9-203ENST00000399275 KCND1Q9NSA2 647 aa10.27□□□□□ -0.77
SMAD9-203ENST00000399275 ANP32DO95626 131 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 CCNCP24863 283 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 LIFRP42702 1097 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 VCPP55072 806 aaKnown RBP10.26□□□□□ -0.77
SMAD9-203ENST00000399275 KCNA1Q09470 495 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 FAM47EQ6ZV65 393 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 PLD3Q8IV08 490 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 ATP6V1G3Q96LB4 118 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 EPN3Q9H201 632 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 HPCAL4Q9UM19 191 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 ITIH6Q6UXX5 1313 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 LGALS16A8MUM7 142 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 CCDC188H7C350 402 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 PDE8AO60658 829 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 ATP6V1G1O75348 118 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 HAUS5O94927 633 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 OR52Z1P0C646 297 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 FCHO2Q0JRZ9 810 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 RABGAP1LQ5R372 815 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 CHMP6Q96FZ7 201 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 POC1B-GALNT4F8VUJ3 575 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 M0R3G1 203 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 OCM2P0CE71 109 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 OCMP0CE72 109 aaPredicted RBP10.26□□□□□ -0.77
SMAD9-203ENST00000399275 HSPA6P17066 643 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 CCNE1P24864 410 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 EIF4A3P38919 411 aaKnown RBP10.26□□□□□ -0.77
SMAD9-203ENST00000399275 ICA1Q05084 483 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 PUDPQ08623 228 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 NCAPG2Q86XI2 1143 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 SLC26A7Q8TE54 656 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 ANKRD27Q96NW4 1050 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 PRPF18Q99633 342 aaKnown RBP10.26□□□□□ -0.77
SMAD9-203ENST00000399275 SMYD3Q9H7B4 428 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 SEL1LQ9UBV2 794 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 SPDYE3A6NKU9 549 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 TNNC2P02585 160 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 SERPING1P05155 500 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 XRCC5P13010 732 aaKnown RBP10.26□□□□□ -0.77
SMAD9-203ENST00000399275 DENND6AQ8IWF6 608 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 ATP8B4Q8TF62 1192 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 CAPSLQ8WWF8 208 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 TRIM15Q9C019 465 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 TUBE1Q9UJT0 475 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 IPPQ9Y573 584 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 TNKSO95271 1327 aa10.26□□□□□ -0.77
SMAD9-203ENST00000399275 A0A1B0GTH6 734 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 KCNQ3O43525 872 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 ATN1P54259 1190 aaPredicted RBP10.25□□□□□ -0.77
SMAD9-203ENST00000399275 LIN9Q5TKA1 542 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 ANKRD13CQ8N6S4 541 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 NEK9Q8TD19 979 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 DTX3LQ8TDB6 740 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 RGS20O76081 388 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 NPR1P16066 1061 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 R3HDM1Q15032 1099 aaKnown RBP10.25□□□□□ -0.77
SMAD9-203ENST00000399275 NMD3Q96D46 503 aaKnown RBP10.25□□□□□ -0.77
SMAD9-203ENST00000399275 FAM89AQ96GI7 184 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 ABCA6Q8N139 1617 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 PCDH11XQ9BZA7 1347 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 PCDH11YQ9BZA8 1340 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 MLH3Q9UHC1 1453 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 TRIM64CA6NLI5 447 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 SRGAP2O75044 1071 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 SLCO1A2P46721 670 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 ADCY7P51828 1080 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 TRIM25Q14258 630 aaKnown RBP10.25□□□□□ -0.77
SMAD9-203ENST00000399275 CASC4Q6P4E1 433 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 TAS2R42Q7RTR8 314 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 OR9Q1Q8NGQ5 310 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 ZNF473Q8WTR7 871 aaKnown RBP10.25□□□□□ -0.77
SMAD9-203ENST00000399275 DPF2Q92785 391 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 SKA1Q96BD8 255 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 METTL14Q9HCE5 456 aaKnown RBP10.25□□□□□ -0.77
SMAD9-203ENST00000399275 PXDNLA1KZ92 1463 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 A0A0G2JND7 137 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 KPNA4O00629 521 aaPredicted RBP10.25□□□□□ -0.77
SMAD9-203ENST00000399275 AXIN1O15169 862 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 ZPR1O75312 459 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 PRDM1O75626 825 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 CXCR5P32302 372 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 IL12RB1P42701 662 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 SMTNP53814 917 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 PPP2R2AP63151 447 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 ATP1A4Q13733 1029 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 C16orf72Q14CZ0 275 aa10.25□□□□□ -0.77
SMAD9-203ENST00000399275 RABGEF1Q9UJ41 708 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms