RNA–Protein interactions for RNA: ENST00000398743.6

PRAME-202, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PRAME, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-202ENST00000398743 IKZF4Q9H2S9 585 aa15.14■□□□□ 0.01
PRAME-202ENST00000398743 KCNH7Q9NS40 1196 aa15.14■□□□□ 0.01
PRAME-202ENST00000398743 FLOT1O75955 427 aa15.14■□□□□ 0.01
PRAME-202ENST00000398743 JAM2P57087 298 aa15.14■□□□□ 0.01
PRAME-202ENST00000398743 RASA3Q14644 834 aa15.14■□□□□ 0.01
PRAME-202ENST00000398743 CIAPIN1Q6FI81 312 aa15.14■□□□□ 0.01
PRAME-202ENST00000398743 CCNI2Q6ZMN8 369 aaPredicted RBP15.14■□□□□ 0.01
PRAME-202ENST00000398743 NIPA1Q7RTP0 329 aa15.14■□□□□ 0.01
PRAME-202ENST00000398743 MIER3Q7Z3K6 550 aa15.14■□□□□ 0.01
PRAME-202ENST00000398743 KSR1Q8IVT5 923 aa15.14■□□□□ 0.01
PRAME-202ENST00000398743 GOLGA5Q8TBA6 731 aa15.14■□□□□ 0.01
PRAME-202ENST00000398743 AGPAT3Q9NRZ7 376 aa15.14■□□□□ 0.01
PRAME-202ENST00000398743 ZKSCAN7Q9P0L1 754 aaPredicted RBP15.14■□□□□ 0.01
PRAME-202ENST00000398743 COL20A1Q9P218 1284 aa15.14■□□□□ 0.01
PRAME-202ENST00000398743 FRMD4BQ9Y2L6 1034 aa15.14■□□□□ 0.01
PRAME-202ENST00000398743 COG2Q14746 738 aa15.13■□□□□ 0.01
PRAME-202ENST00000398743 VPS36Q86VN1 386 aa15.13■□□□□ 0.01
PRAME-202ENST00000398743 CLEC4DQ8WXI8 215 aa15.13■□□□□ 0.01
PRAME-202ENST00000398743 CCDC102AQ96A19 550 aa15.13■□□□□ 0.01
PRAME-202ENST00000398743 LRRC1Q9BTT6 524 aa15.13■□□□□ 0.01
PRAME-202ENST00000398743 MED4Q9NPJ6 270 aa15.13■□□□□ 0.01
PRAME-202ENST00000398743 PKD2L1Q9P0L9 805 aa15.13■□□□□ 0.01
PRAME-202ENST00000398743 NAGPAQ9UK23 515 aa15.13■□□□□ 0.01
PRAME-202ENST00000398743 HIP1RO75146 1068 aa15.12■□□□□ 0.01
PRAME-202ENST00000398743 FTCDO95954 541 aa15.12■□□□□ 0.01
PRAME-202ENST00000398743 P4HBP07237 508 aaKnown RBP15.12■□□□□ 0.01
PRAME-202ENST00000398743 MATR3P43243 847 aaKnown RBP eCLIP15.12■□□□□ 0.01
PRAME-202ENST00000398743 GHRHRQ02643 423 aa15.12■□□□□ 0.01
PRAME-202ENST00000398743 TNFAIP1Q13829 316 aa15.12■□□□□ 0.01
PRAME-202ENST00000398743 MEI1Q5TIA1 1274 aa15.12■□□□□ 0.01
PRAME-202ENST00000398743 DMAC2Q9NW81 257 aa15.12■□□□□ 0.01
PRAME-202ENST00000398743 SMARCAL1Q9NZC9 954 aa15.12■□□□□ 0.01
PRAME-202ENST00000398743 EHD2Q9NZN4 543 aa15.12■□□□□ 0.01
PRAME-202ENST00000398743 AJAP1Q9UKB5 411 aaPredicted RBP15.12■□□□□ 0.01
PRAME-202ENST00000398743 SCAF8Q9UPN6 1271 aaKnown RBP15.12■□□□□ 0.01
PRAME-202ENST00000398743 A0A0U1RQG5 324 aaPredicted RBP15.12■□□□□ 0.01
PRAME-202ENST00000398743 N4BP1O75113 896 aaKnown RBP15.12■□□□□ 0.01
PRAME-202ENST00000398743 MYBL2P10244 700 aa15.12■□□□□ 0.01
PRAME-202ENST00000398743 ALAS1P13196 640 aa15.12■□□□□ 0.01
PRAME-202ENST00000398743 FMO5P49326 533 aa15.12■□□□□ 0.01
PRAME-202ENST00000398743 CYP2J2P51589 502 aa15.12■□□□□ 0.01
PRAME-202ENST00000398743 PPP2R5AQ15172 486 aa15.12■□□□□ 0.01
PRAME-202ENST00000398743 PCNX4Q63HM2 1172 aa15.12■□□□□ 0.01
PRAME-202ENST00000398743 ALKBH5Q6P6C2 394 aaKnown RBP15.12■□□□□ 0.01
PRAME-202ENST00000398743 PADI6Q6TGC4 694 aa15.12■□□□□ 0.01
PRAME-202ENST00000398743 CPXCR1Q8N123 301 aa15.12■□□□□ 0.01
PRAME-202ENST00000398743 IL31RAQ8NI17 732 aa15.12■□□□□ 0.01
PRAME-202ENST00000398743 FAM71BQ8TC56 605 aa15.12■□□□□ 0.01
PRAME-202ENST00000398743 JDP2Q8WYK2 163 aa15.12■□□□□ 0.01
PRAME-202ENST00000398743 KIAA1683Q9H0B3 1180 aa15.12■□□□□ 0.01
PRAME-202ENST00000398743 SLC38A10Q9HBR0 1119 aa15.12■□□□□ 0.01
PRAME-202ENST00000398743 VPS18Q9P253 973 aa15.12■□□□□ 0.01
PRAME-202ENST00000398743 ADAM21Q9UKJ8 722 aa15.12■□□□□ 0.01
PRAME-202ENST00000398743 GRID2IPA4D2P6 1211 aa15.11■□□□□ 0.01
PRAME-202ENST00000398743 FERP16591 822 aa15.11■□□□□ 0.01
PRAME-202ENST00000398743 MAPK7Q13164 816 aa15.11■□□□□ 0.01
PRAME-202ENST00000398743 IFI16Q16666 785 aaKnown RBP15.11■□□□□ 0.01
PRAME-202ENST00000398743 TKFCQ3LXA3 575 aa15.11■□□□□ 0.01
PRAME-202ENST00000398743 GSPT2Q8IYD1 628 aaKnown RBP15.11■□□□□ 0.01
PRAME-202ENST00000398743 SYCP3Q8IZU3 236 aa15.11■□□□□ 0.01
PRAME-202ENST00000398743 DAW1Q8N136 415 aa15.11■□□□□ 0.01
PRAME-202ENST00000398743 EXOC4Q96A65 974 aa15.11■□□□□ 0.01
PRAME-202ENST00000398743 SELENOOQ9BVL4 669 aa15.11■□□□□ 0.01
PRAME-202ENST00000398743 STRA6Q9BX79 667 aa15.11■□□□□ 0.01
PRAME-202ENST00000398743 AGO4Q9HCK5 861 aaKnown RBP15.11■□□□□ 0.01
PRAME-202ENST00000398743 MAP3K20Q9NYL2 800 aaKnown RBP15.11■□□□□ 0.01
PRAME-202ENST00000398743 PIM2Q9P1W9 311 aa15.11■□□□□ 0.01
PRAME-202ENST00000398743 LARSQ9P2J5 1176 aaKnown RBP15.11■□□□□ 0.01
PRAME-202ENST00000398743 UBIAD1Q9Y5Z9 338 aa15.11■□□□□ 0.01
PRAME-202ENST00000398743 ATP8B3O60423 1300 aa15.11■□□□□ 0.01
PRAME-202ENST00000398743 K7ENM7 598 aa15.11■□□□□ 0.01
PRAME-202ENST00000398743 DHX15O43143 795 aaKnown RBP15.11■□□□□ 0.01
PRAME-202ENST00000398743 PPP1R37O75864 691 aa15.11■□□□□ 0.01
PRAME-202ENST00000398743 STAT1P42224 750 aa15.11■□□□□ 0.01
PRAME-202ENST00000398743 AARSP49588 968 aaKnown RBP eCLIP15.11■□□□□ 0.01
PRAME-202ENST00000398743 GYS2P54840 703 aa15.11■□□□□ 0.01
PRAME-202ENST00000398743 MTMR1Q13613 665 aa15.11■□□□□ 0.01
PRAME-202ENST00000398743 C8orf74Q6P047 294 aa15.11■□□□□ 0.01
PRAME-202ENST00000398743 GJB7Q6PEY0 223 aa15.11■□□□□ 0.01
PRAME-202ENST00000398743 SLC9A9Q8IVB4 645 aa15.11■□□□□ 0.01
PRAME-202ENST00000398743 SLC16A10Q8TF71 515 aa15.11■□□□□ 0.01
PRAME-202ENST00000398743 HDAC7Q8WUI4 952 aa15.11■□□□□ 0.01
PRAME-202ENST00000398743 MS4A14Q96JA4 679 aa15.11■□□□□ 0.01
PRAME-202ENST00000398743 TEPSINQ96N21 525 aa15.11■□□□□ 0.01
PRAME-202ENST00000398743 RAVER2Q9HCJ3 691 aaKnown RBP15.11■□□□□ 0.01
PRAME-202ENST00000398743 HOMER2Q9NSB8 354 aa15.11■□□□□ 0.01
PRAME-202ENST00000398743 RBM12Q9NTZ6 932 aaKnown RBP15.11■□□□□ 0.01
PRAME-202ENST00000398743 STIM2Q9P246 746 aa15.11■□□□□ 0.01
PRAME-202ENST00000398743 DMGDHQ9UI17 866 aaKnown RBP15.11■□□□□ 0.01
PRAME-202ENST00000398743 HPCAL4Q9UM19 191 aa15.11■□□□□ 0.01
PRAME-202ENST00000398743 SAMM50Q9Y512 469 aa15.11■□□□□ 0.01
PRAME-202ENST00000398743 ZHX2Q9Y6X8 837 aa15.11■□□□□ 0.01
PRAME-202ENST00000398743 ERICH4A6NGS2 130 aa15.1■□□□□ 0.01
PRAME-202ENST00000398743 DNA2P51530 1060 aa15.1■□□□□ 0.01
PRAME-202ENST00000398743 ITGB3BPQ13352 177 aaPredicted RBP15.1■□□□□ 0.01
PRAME-202ENST00000398743 MYBPC2Q14324 1141 aa15.1■□□□□ 0.01
PRAME-202ENST00000398743 GLE1Q53GS7 698 aaKnown RBP15.1■□□□□ 0.01
PRAME-202ENST00000398743 SYTL5Q8TDW5 730 aaPredicted RBP15.1■□□□□ 0.01
PRAME-202ENST00000398743 TAOK3Q9H2K8 898 aa15.1■□□□□ 0.01
PRAME-202ENST00000398743 GINM1Q9NU53 330 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms