RNA–Protein interactions for RNA: ENST00000398729.1

VCX3A-202, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 808 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-202ENST00000398729 MBOAT7Q96N66 472 aa15.12■□□□□ 0.01
VCX3A-202ENST00000398729 DDX25Q9UHL0 483 aaKnown RBP15.12■□□□□ 0.01
VCX3A-202ENST00000398729 SEC24BO95487 1268 aa15.11■□□□□ 0.01
VCX3A-202ENST00000398729 OATP04181 439 aa15.11■□□□□ 0.01
VCX3A-202ENST00000398729 TMOD1P28289 359 aa15.11■□□□□ 0.01
VCX3A-202ENST00000398729 PRKCEQ02156 737 aa15.11■□□□□ 0.01
VCX3A-202ENST00000398729 FIBCD1Q8N539 461 aa15.11■□□□□ 0.01
VCX3A-202ENST00000398729 ETNPPLQ8TBG4 499 aa15.11■□□□□ 0.01
VCX3A-202ENST00000398729 LINC01599Q8WXQ3 324 aa15.11■□□□□ 0.01
VCX3A-202ENST00000398729 GJB4Q9NTQ9 266 aa15.11■□□□□ 0.01
VCX3A-202ENST00000398729 ZNF318Q5VUA4 2279 aa15.11■□□□□ 0.01
VCX3A-202ENST00000398729 USP34Q70CQ2 3546 aa15.11■□□□□ 0.01
VCX3A-202ENST00000398729 ADGRA3Q8IWK6 1321 aa15.11■□□□□ 0.01
VCX3A-202ENST00000398729 TTC3P53804 2025 aa15.1■□□□□ 0.01
VCX3A-202ENST00000398729 NLRC5Q86WI3 1866 aa15.1■□□□□ 0.01
VCX3A-202ENST00000398729 C19orf67A6NJJ6 358 aa15.1■□□□□ 0.01
VCX3A-202ENST00000398729 H3BNC9 293 aa15.1■□□□□ 0.01
VCX3A-202ENST00000398729 ZNF862O60290 1169 aa15.1■□□□□ 0.01
VCX3A-202ENST00000398729 DTNBO60941 627 aa15.1■□□□□ 0.01
VCX3A-202ENST00000398729 RPS6KA5O75582 802 aa15.1■□□□□ 0.01
VCX3A-202ENST00000398729 LARGE1O95461 756 aa15.1■□□□□ 0.01
VCX3A-202ENST00000398729 GCFC2P16383 781 aaKnown RBP15.1■□□□□ 0.01
VCX3A-202ENST00000398729 MRE11P49959 708 aa15.1■□□□□ 0.01
VCX3A-202ENST00000398729 NFX1Q12986 1120 aaKnown RBP15.1■□□□□ 0.01
VCX3A-202ENST00000398729 UGCGQ16739 394 aa15.1■□□□□ 0.01
VCX3A-202ENST00000398729 TMEM266Q2M3C6 531 aa15.1■□□□□ 0.01
VCX3A-202ENST00000398729 PUS10Q3MIT2 529 aaKnown RBP15.1■□□□□ 0.01
VCX3A-202ENST00000398729 TCEAL5Q5H9L2 206 aa15.1■□□□□ 0.01
VCX3A-202ENST00000398729 PPP4R3AQ6IN85 833 aa15.1■□□□□ 0.01
VCX3A-202ENST00000398729 PIK3AP1Q6ZUJ8 805 aa15.1■□□□□ 0.01
VCX3A-202ENST00000398729 RTN4RL1Q86UN2 441 aaPredicted RBP15.1■□□□□ 0.01
VCX3A-202ENST00000398729 TMEM192Q8IY95 271 aa15.1■□□□□ 0.01
VCX3A-202ENST00000398729 MAP7D2Q96T17 732 aa15.1■□□□□ 0.01
VCX3A-202ENST00000398729 NAP1L4Q99733 375 aaKnown RBP15.1■□□□□ 0.01
VCX3A-202ENST00000398729 CDHR5Q9HBB8 845 aa15.1■□□□□ 0.01
VCX3A-202ENST00000398729 BRMS1Q9HCU9 246 aa15.1■□□□□ 0.01
VCX3A-202ENST00000398729 RALGAPA2Q2PPJ7 1873 aa15.1■□□□□ 0.01
VCX3A-202ENST00000398729 GPR182O15218 404 aa15.09■□□□□ 0.01
VCX3A-202ENST00000398729 SLC37A4O43826 429 aa15.09■□□□□ 0.01
VCX3A-202ENST00000398729 DGKIO75912 1065 aa15.09■□□□□ 0.01
VCX3A-202ENST00000398729 VTNP04004 478 aa15.09■□□□□ 0.01
VCX3A-202ENST00000398729 STAG3L1P0CL83 205 aa15.09■□□□□ 0.01
VCX3A-202ENST00000398729 KRT2P35908 639 aa15.09■□□□□ 0.01
VCX3A-202ENST00000398729 LTBRP36941 435 aa15.09■□□□□ 0.01
VCX3A-202ENST00000398729 CLCN3P51790 818 aa15.09■□□□□ 0.01
VCX3A-202ENST00000398729 CRYBB1P53674 252 aaPredicted RBP15.09■□□□□ 0.01
VCX3A-202ENST00000398729 NHLH1Q02575 133 aa15.09■□□□□ 0.01
VCX3A-202ENST00000398729 ZP2Q05996 745 aa15.09■□□□□ 0.01
VCX3A-202ENST00000398729 GPM6BQ13491 265 aa15.09■□□□□ 0.01
VCX3A-202ENST00000398729 BTG3Q14201 252 aaPredicted RBP15.09■□□□□ 0.01
VCX3A-202ENST00000398729 PTPROQ16827 1216 aa15.09■□□□□ 0.01
VCX3A-202ENST00000398729 KIZQ2M2Z5 673 aa15.09■□□□□ 0.01
VCX3A-202ENST00000398729 EFCAB12Q6NXP0 572 aa15.09■□□□□ 0.01
VCX3A-202ENST00000398729 B3GNT9Q6UX72 402 aa15.09■□□□□ 0.01
VCX3A-202ENST00000398729 NPAS4Q8IUM7 802 aa15.09■□□□□ 0.01
VCX3A-202ENST00000398729 ZNF710Q8N1W2 664 aa15.09■□□□□ 0.01
VCX3A-202ENST00000398729 BANK1Q8NDB2 785 aa15.09■□□□□ 0.01
VCX3A-202ENST00000398729 OXER1Q8TDS5 423 aa15.09■□□□□ 0.01
VCX3A-202ENST00000398729 FBXL18Q96ME1 805 aa15.09■□□□□ 0.01
VCX3A-202ENST00000398729 FAM20AQ96MK3 541 aa15.09■□□□□ 0.01
VCX3A-202ENST00000398729 PPP1R16BQ96T49 567 aa15.09■□□□□ 0.01
VCX3A-202ENST00000398729 OSMRQ99650 979 aa15.09■□□□□ 0.01
VCX3A-202ENST00000398729 TMX1Q9H3N1 280 aa15.09■□□□□ 0.01
VCX3A-202ENST00000398729 ERVK-5Q9HDB9 667 aa15.09■□□□□ 0.01
VCX3A-202ENST00000398729 AKT3Q9Y243 479 aa15.09■□□□□ 0.01
VCX3A-202ENST00000398729 NOC2LQ9Y3T9 749 aaKnown RBP15.09■□□□□ 0.01
VCX3A-202ENST00000398729 RWDD3Q9Y3V2 267 aa15.09■□□□□ 0.01
VCX3A-202ENST00000398729 DCXO43602 365 aa15.08■□□□□ 0
VCX3A-202ENST00000398729 CCNT1O60563 726 aaKnown RBP15.08■□□□□ 0
VCX3A-202ENST00000398729 GPR32O75388 356 aa15.08■□□□□ 0
VCX3A-202ENST00000398729 FDPSP14324 419 aaKnown RBP15.08■□□□□ 0
VCX3A-202ENST00000398729 CTNNB1P35222 781 aa15.08■□□□□ 0
VCX3A-202ENST00000398729 TBC1D8BQ0IIM8 1120 aa15.08■□□□□ 0
VCX3A-202ENST00000398729 XKR3Q5GH77 459 aa15.08■□□□□ 0
VCX3A-202ENST00000398729 LRRC71Q8N4P6 559 aa15.08■□□□□ 0
VCX3A-202ENST00000398729 NSUN7Q8NE18 718 aaKnown RBP15.08■□□□□ 0
VCX3A-202ENST00000398729 TMEM40Q8WWA1 233 aa15.08■□□□□ 0
VCX3A-202ENST00000398729 ZNF689Q96CS4 500 aaPredicted RBP15.08■□□□□ 0
VCX3A-202ENST00000398729 PABPC5Q96DU9 382 aaKnown RBP15.08■□□□□ 0
VCX3A-202ENST00000398729 RC3H2Q9HBD1 1191 aaKnown RBP15.08■□□□□ 0
VCX3A-202ENST00000398729 RNF216Q9NWF9 866 aaPredicted RBP15.08■□□□□ 0
VCX3A-202ENST00000398729 SEPT9Q9UHD8 586 aaPredicted RBP15.08■□□□□ 0
VCX3A-202ENST00000398729 LRFN2Q9ULH4 789 aa15.08■□□□□ 0
VCX3A-202ENST00000398729 ST3GAL5Q9UNP4 418 aa15.08■□□□□ 0
VCX3A-202ENST00000398729 DENND3A2RUS2 1198 aa15.07■□□□□ 0
VCX3A-202ENST00000398729 TBX3O15119 743 aa15.07■□□□□ 0
VCX3A-202ENST00000398729 MARCH6O60337 910 aa15.07■□□□□ 0
VCX3A-202ENST00000398729 RB1P06400 928 aa15.07■□□□□ 0
VCX3A-202ENST00000398729 BMPR1AP36894 532 aa15.07■□□□□ 0
VCX3A-202ENST00000398729 SARSP49591 514 aaKnown RBP15.07■□□□□ 0
VCX3A-202ENST00000398729 NLRP11P59045 1033 aaKnown RBP15.07■□□□□ 0
VCX3A-202ENST00000398729 PPP2R5CQ13362 524 aa15.07■□□□□ 0
VCX3A-202ENST00000398729 TRIM29Q14134 588 aa15.07■□□□□ 0
VCX3A-202ENST00000398729 CMTR2Q8IYT2 770 aaKnown RBP15.07■□□□□ 0
VCX3A-202ENST00000398729 CRIPAKQ8N1N5 446 aa15.07■□□□□ 0
VCX3A-202ENST00000398729 LINC01465Q8N7H1 131 aa15.07■□□□□ 0
VCX3A-202ENST00000398729 ADAM2Q99965 735 aa15.07■□□□□ 0
VCX3A-202ENST00000398729 NIFKQ9BYG3 293 aaKnown RBP15.07■□□□□ 0
VCX3A-202ENST00000398729 KCNMB3Q9NPA1 279 aa15.07■□□□□ 0
VCX3A-202ENST00000398729 C1orf112Q9NSG2 853 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms