RNA–Protein interactions for RNA: ENST00000398587.6

PCDHGA11-201, Transcript of protocadherin gamma subfamily A, 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHGA11, Length 4,647 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11-201ENST00000398587 PSMC4P43686 418 aa15.34■□□□□ 0.05
PCDHGA11-201ENST00000398587 ALS2CLQ60I27 953 aa15.34■□□□□ 0.05
PCDHGA11-201ENST00000398587 FAM151AQ8WW52 585 aa15.34■□□□□ 0.05
PCDHGA11-201ENST00000398587 VAMP7P51809 220 aa15.34■□□□□ 0.05
PCDHGA11-201ENST00000398587 HDLBPQ00341 1268 aaKnown RBP15.34■□□□□ 0.05
PCDHGA11-201ENST00000398587 LLGL1Q15334 1064 aa15.34■□□□□ 0.05
PCDHGA11-201ENST00000398587 SNX25Q9H3E2 840 aa15.34■□□□□ 0.05
PCDHGA11-201ENST00000398587 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.34■□□□□ 0.05
PCDHGA11-201ENST00000398587 GFPT1Q06210 699 aaPredicted RBP15.34■□□□□ 0.05
PCDHGA11-201ENST00000398587 SF3A3Q12874 501 aaKnown RBP eCLIP15.34■□□□□ 0.05
PCDHGA11-201ENST00000398587 SNX1Q13596 522 aa15.34■□□□□ 0.05
PCDHGA11-201ENST00000398587 CUL1Q13616 776 aa15.34■□□□□ 0.05
PCDHGA11-201ENST00000398587 SLMAPQ14BN4 828 aa15.34■□□□□ 0.05
PCDHGA11-201ENST00000398587 THNSL1Q8IYQ7 743 aa15.34■□□□□ 0.05
PCDHGA11-201ENST00000398587 PCDHA10Q9Y5I2 948 aa15.34■□□□□ 0.05
PCDHGA11-201ENST00000398587 RFX1P22670 979 aa15.33■□□□□ 0.05
PCDHGA11-201ENST00000398587 CCHCR1Q8TD31 782 aa15.33■□□□□ 0.05
PCDHGA11-201ENST00000398587 FAM193BQ96PV7 902 aaPredicted RBP15.33■□□□□ 0.05
PCDHGA11-201ENST00000398587 TMEM60Q9H2L4 133 aa15.33■□□□□ 0.05
PCDHGA11-201ENST00000398587 GIPC1O14908 333 aa15.33■□□□□ 0.04
PCDHGA11-201ENST00000398587 WDR46O15213 610 aaKnown RBP15.33■□□□□ 0.04
PCDHGA11-201ENST00000398587 FGGP02679 453 aa15.33■□□□□ 0.04
PCDHGA11-201ENST00000398587 PTPAQ15257 358 aa15.33■□□□□ 0.04
PCDHGA11-201ENST00000398587 STYK1Q6J9G0 422 aa15.33■□□□□ 0.04
PCDHGA11-201ENST00000398587 SWSAP1Q6NVH7 229 aa15.33■□□□□ 0.04
PCDHGA11-201ENST00000398587 PSPC1Q8WXF1 523 aaKnown RBP15.33■□□□□ 0.04
PCDHGA11-201ENST00000398587 CCT6BQ92526 530 aa15.33■□□□□ 0.04
PCDHGA11-201ENST00000398587 CALR3Q96L12 384 aaKnown RBP15.33■□□□□ 0.04
PCDHGA11-201ENST00000398587 FMO2Q99518 471 aa15.33■□□□□ 0.04
PCDHGA11-201ENST00000398587 JMJD4Q9H9V9 463 aa15.33■□□□□ 0.04
PCDHGA11-201ENST00000398587 INTS9Q9NV88 658 aaKnown RBP15.33■□□□□ 0.04
PCDHGA11-201ENST00000398587 RGL1Q9NZL6 768 aa15.33■□□□□ 0.04
PCDHGA11-201ENST00000398587 PRR12Q9ULL5 1215 aa15.33■□□□□ 0.04
PCDHGA11-201ENST00000398587 DR1Q01658 176 aa15.33■□□□□ 0.04
PCDHGA11-201ENST00000398587 STK4Q13043 487 aa15.33■□□□□ 0.04
PCDHGA11-201ENST00000398587 ZNF667Q5HYK9 610 aa15.33■□□□□ 0.04
PCDHGA11-201ENST00000398587 NME8Q8N427 588 aa15.33■□□□□ 0.04
PCDHGA11-201ENST00000398587 SMC1BQ8NDV3 1235 aa15.33■□□□□ 0.04
PCDHGA11-201ENST00000398587 AP1M1Q9BXS5 423 aa15.33■□□□□ 0.04
PCDHGA11-201ENST00000398587 ANAPC5Q9UJX4 755 aa15.33■□□□□ 0.04
PCDHGA11-201ENST00000398587 LRRD1A4D1F6 860 aa15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 RASSF2P50749 326 aa15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 GPC5P78333 572 aa15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 CCZ1BP86790 482 aa15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 CCZ1P86791 482 aaPredicted RBP15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 SLC7A5Q01650 507 aa15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 DRAP1Q14919 205 aaPredicted RBP15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 ITIH6Q6UXX5 1313 aa15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 VCPKMTQ9H867 229 aa15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 HAUS6Q7Z4H7 955 aa15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 TAB3Q8N5C8 712 aaPredicted RBP15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 C7orf31Q8N865 590 aa15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 BEGAINQ9BUH8 593 aa15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 KCNF1Q9H3M0 494 aa15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 ZNF302Q9NR11 478 aa15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 ADAM22Q9P0K1 906 aa15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 ZNF70Q9UC06 446 aaPredicted RBP15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 CNOT8Q9UFF9 292 aaKnown RBP15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 MCF2LO15068 1137 aa15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 CRCPO75575 148 aa15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 YWHAGP61981 247 aaKnown RBP eCLIP15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 NR1I3Q14994 352 aa15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 KRT39Q6A163 491 aa15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 PDXDC1Q6P996 788 aa15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 RSBN1LQ6PCB5 846 aaPredicted RBP15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 DAGLBQ8NCG7 672 aa15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 RPAP3Q9H6T3 665 aaPredicted RBP15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 SRGNP10124 158 aa15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 ERICH1Q86X53 443 aa15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 FBXL16Q8N461 479 aa15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 GPATCH11Q8N954 259 aa15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 TMEM35BQ8NCS4 154 aa15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 EXOC4Q96A65 974 aa15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 FAM213AQ9BRX8 229 aa15.32■□□□□ 0.04
PCDHGA11-201ENST00000398587 MYMKA6NI61 221 aa15.31■□□□□ 0.04
PCDHGA11-201ENST00000398587 OR6B2Q6IFH4 312 aa15.31■□□□□ 0.04
PCDHGA11-201ENST00000398587 HPS3Q969F9 1004 aa15.31■□□□□ 0.04
PCDHGA11-201ENST00000398587 MAD1L1Q9Y6D9 718 aa15.31■□□□□ 0.04
PCDHGA11-201ENST00000398587 SYNGAP1Q96PV0 1343 aa15.31■□□□□ 0.04
PCDHGA11-201ENST00000398587 SRGAP2O75044 1071 aa15.31■□□□□ 0.04
PCDHGA11-201ENST00000398587 E4F1Q66K89 784 aaPredicted RBP15.31■□□□□ 0.04
PCDHGA11-201ENST00000398587 ARHGEF2Q92974 986 aaKnown RBP15.31■□□□□ 0.04
PCDHGA11-201ENST00000398587 MTRQ99707 1265 aa15.31■□□□□ 0.04
PCDHGA11-201ENST00000398587 CALN1Q9BXU9 219 aa15.31■□□□□ 0.04
PCDHGA11-201ENST00000398587 INTS2Q9H0H0 1204 aaKnown RBP15.31■□□□□ 0.04
PCDHGA11-201ENST00000398587 POC1B-GALNT4F8VUJ3 575 aa15.31■□□□□ 0.04
PCDHGA11-201ENST00000398587 HIP1RO75146 1068 aa15.31■□□□□ 0.04
PCDHGA11-201ENST00000398587 EIF3BP55884 814 aaKnown RBP15.31■□□□□ 0.04
PCDHGA11-201ENST00000398587 MTF1Q14872 753 aa15.31■□□□□ 0.04
PCDHGA11-201ENST00000398587 SCARA5Q6ZMJ2 495 aa15.31■□□□□ 0.04
PCDHGA11-201ENST00000398587 SDCCAG8Q86SQ7 713 aaPredicted RBP15.31■□□□□ 0.04
PCDHGA11-201ENST00000398587 CDKL2Q92772 493 aa15.31■□□□□ 0.04
PCDHGA11-201ENST00000398587 COL5A2P05997 1499 aaPredicted RBP15.31■□□□□ 0.04
PCDHGA11-201ENST00000398587 BCL9O00512 1426 aa15.31■□□□□ 0.04
PCDHGA11-201ENST00000398587 SYNJ2BP-COX16A0A087WUM0 186 aa15.31■□□□□ 0.04
PCDHGA11-201ENST00000398587 RGL2O15211 777 aa15.31■□□□□ 0.04
PCDHGA11-201ENST00000398587 GYS1P13807 737 aa15.31■□□□□ 0.04
PCDHGA11-201ENST00000398587 GRIN1Q05586 938 aa15.31■□□□□ 0.04
PCDHGA11-201ENST00000398587 RSRC1Q96IZ7 334 aaKnown RBP15.31■□□□□ 0.04
PCDHGA11-201ENST00000398587 COX16Q9P0S2 106 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms