RNA–Protein interactions for RNA: ENST00000398452.6

SKA1-202, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA1, Length 979 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-202ENST00000398452 DGAT1O75907 488 aa15.76■□□□□ 0.11
SKA1-202ENST00000398452 KIF20AO95235 890 aa15.76■□□□□ 0.11
SKA1-202ENST00000398452 IGHA2P01877 340 aa15.76■□□□□ 0.11
SKA1-202ENST00000398452 INHAP05111 366 aa15.76■□□□□ 0.11
SKA1-202ENST00000398452 MYL3P08590 195 aa15.76■□□□□ 0.11
SKA1-202ENST00000398452 GAP43P17677 238 aa15.76■□□□□ 0.11
SKA1-202ENST00000398452 PPP1R2P41236 205 aa15.76■□□□□ 0.11
SKA1-202ENST00000398452 PSEN1P49768 467 aa15.76■□□□□ 0.11
SKA1-202ENST00000398452 RAD51AP2Q09MP3 1159 aa15.76■□□□□ 0.11
SKA1-202ENST00000398452 KCNB1Q14721 858 aa15.76■□□□□ 0.11
SKA1-202ENST00000398452 FSCN1Q16658 493 aaKnown RBP15.76■□□□□ 0.11
SKA1-202ENST00000398452 TMEM63BQ5T3F8 832 aa15.76■□□□□ 0.11
SKA1-202ENST00000398452 RINT1Q6NUQ1 792 aa15.76■□□□□ 0.11
SKA1-202ENST00000398452 MCPH1Q8NEM0 835 aa15.76■□□□□ 0.11
SKA1-202ENST00000398452 ATP8B4Q8TF62 1192 aa15.76■□□□□ 0.11
SKA1-202ENST00000398452 SLC7A3Q8WY07 619 aa15.76■□□□□ 0.11
SKA1-202ENST00000398452 UNC93B1Q9H1C4 597 aa15.76■□□□□ 0.11
SKA1-202ENST00000398452 XPNPEP3Q9NQH7 507 aa15.76■□□□□ 0.11
SKA1-202ENST00000398452 WRAP73Q9P2S5 460 aaPredicted RBP15.76■□□□□ 0.11
SKA1-202ENST00000398452 KCNG1Q9UIX4 513 aa15.76■□□□□ 0.11
SKA1-202ENST00000398452 MAN1B1Q9UKM7 699 aa15.76■□□□□ 0.11
SKA1-202ENST00000398452 ODF2LQ9ULJ1 636 aa15.76■□□□□ 0.11
SKA1-202ENST00000398452 A6NJR5 290 aa15.75■□□□□ 0.11
SKA1-202ENST00000398452 H3BRB1 525 aa15.75■□□□□ 0.11
SKA1-202ENST00000398452 ZNF862O60290 1169 aa15.75■□□□□ 0.11
SKA1-202ENST00000398452 CASP1P29466 404 aa15.75■□□□□ 0.11
SKA1-202ENST00000398452 CCND3P30281 292 aaPredicted RBP15.75■□□□□ 0.11
SKA1-202ENST00000398452 RFC5P40937 340 aa15.75■□□□□ 0.11
SKA1-202ENST00000398452 CHMP4BP1P59074 171 aa15.75■□□□□ 0.11
SKA1-202ENST00000398452 TRIM32Q13049 653 aa15.75■□□□□ 0.11
SKA1-202ENST00000398452 PSMD2Q13200 908 aa15.75■□□□□ 0.11
SKA1-202ENST00000398452 KMT5BQ4FZB7 885 aa15.75■□□□□ 0.11
SKA1-202ENST00000398452 HERC4Q5GLZ8 1057 aaPredicted RBP15.75■□□□□ 0.11
SKA1-202ENST00000398452 L1TD1Q5T7N2 865 aaKnown RBP15.75■□□□□ 0.11
SKA1-202ENST00000398452 NT5DC1Q5TFE4 455 aa15.75■□□□□ 0.11
SKA1-202ENST00000398452 PLA2G4FQ68DD2 849 aa15.75■□□□□ 0.11
SKA1-202ENST00000398452 ISM2Q6H9L7 571 aa15.75■□□□□ 0.11
SKA1-202ENST00000398452 STXBP4Q6ZWJ1 553 aa15.75■□□□□ 0.11
SKA1-202ENST00000398452 TRPV1Q8NER1 839 aa15.75■□□□□ 0.11
SKA1-202ENST00000398452 LRRC15Q8TF66 581 aa15.75■□□□□ 0.11
SKA1-202ENST00000398452 DPF3Q92784 378 aa15.75■□□□□ 0.11
SKA1-202ENST00000398452 DRC1Q96MC2 740 aa15.75■□□□□ 0.11
SKA1-202ENST00000398452 PCYT2Q99447 389 aa15.75■□□□□ 0.11
SKA1-202ENST00000398452 MTRQ99707 1265 aa15.75■□□□□ 0.11
SKA1-202ENST00000398452 TUT1Q9H6E5 874 aaKnown RBP15.75■□□□□ 0.11
SKA1-202ENST00000398452 ATP6V0A4Q9HBG4 840 aa15.75■□□□□ 0.11
SKA1-202ENST00000398452 CYP26B1Q9NR63 512 aa15.75■□□□□ 0.11
SKA1-202ENST00000398452 DDX20Q9UHI6 824 aaKnown RBP15.75■□□□□ 0.11
SKA1-202ENST00000398452 ZBTB39O15060 712 aa15.74■□□□□ 0.11
SKA1-202ENST00000398452 ZNF286BP0CG31 522 aa15.74■□□□□ 0.11
SKA1-202ENST00000398452 GUCY2CP25092 1073 aa15.74■□□□□ 0.11
SKA1-202ENST00000398452 SARSP49591 514 aaKnown RBP15.74■□□□□ 0.11
SKA1-202ENST00000398452 NPEPPSP55786 919 aa15.74■□□□□ 0.11
SKA1-202ENST00000398452 GJA9P57773 515 aa15.74■□□□□ 0.11
SKA1-202ENST00000398452 TBC1D8BQ0IIM8 1120 aa15.74■□□□□ 0.11
SKA1-202ENST00000398452 PLCB4Q15147 1175 aa15.74■□□□□ 0.11
SKA1-202ENST00000398452 ZNF484Q5JVG2 852 aa15.74■□□□□ 0.11
SKA1-202ENST00000398452 GNASQ5JWF2 1037 aa15.74■□□□□ 0.11
SKA1-202ENST00000398452 FAM102BQ5T8I3 360 aa15.74■□□□□ 0.11
SKA1-202ENST00000398452 ZNF658Q5TYW1 1059 aaPredicted RBP15.74■□□□□ 0.11
SKA1-202ENST00000398452 ANO5Q75V66 913 aa15.74■□□□□ 0.11
SKA1-202ENST00000398452 RNF180Q86T96 592 aa15.74■□□□□ 0.11
SKA1-202ENST00000398452 TRIM50Q86XT4 487 aa15.74■□□□□ 0.11
SKA1-202ENST00000398452 MYCT1Q8N699 235 aa15.74■□□□□ 0.11
SKA1-202ENST00000398452 MLKLQ8NB16 471 aa15.74■□□□□ 0.11
SKA1-202ENST00000398452 PCSK9Q8NBP7 692 aaKnown RBP15.74■□□□□ 0.11
SKA1-202ENST00000398452 LENG1Q96BZ8 264 aaPredicted RBP15.74■□□□□ 0.11
SKA1-202ENST00000398452 REEP2Q9BRK0 252 aa15.74■□□□□ 0.11
SKA1-202ENST00000398452 RUSC1Q9BVN2 902 aa15.74■□□□□ 0.11
SKA1-202ENST00000398452 NIFKQ9BYG3 293 aaKnown RBP15.74■□□□□ 0.11
SKA1-202ENST00000398452 PARVGQ9HBI0 331 aa15.74■□□□□ 0.11
SKA1-202ENST00000398452 LARSQ9P2J5 1176 aaKnown RBP15.74■□□□□ 0.11
SKA1-202ENST00000398452 TELO2Q9Y4R8 837 aa15.74■□□□□ 0.11
SKA1-202ENST00000398452 BECN2A8MW95 431 aa15.73■□□□□ 0.11
SKA1-202ENST00000398452 GAS2O43903 313 aaKnown RBP15.73■□□□□ 0.11
SKA1-202ENST00000398452 RHOBTB3O94955 611 aa15.73■□□□□ 0.11
SKA1-202ENST00000398452 TPM4P67936 248 aa15.73■□□□□ 0.11
SKA1-202ENST00000398452 MORC3Q14149 939 aa15.73■□□□□ 0.11
SKA1-202ENST00000398452 GIT2Q14161 759 aa15.73■□□□□ 0.11
SKA1-202ENST00000398452 ANO6Q4KMQ2 910 aa15.73■□□□□ 0.11
SKA1-202ENST00000398452 MAP3K21Q5TCX8 1036 aa15.73■□□□□ 0.11
SKA1-202ENST00000398452 C1orf186Q6ZWK4 172 aa15.73■□□□□ 0.11
SKA1-202ENST00000398452 MAEAQ7L5Y9 396 aa15.73■□□□□ 0.11
SKA1-202ENST00000398452 RETREG2Q8NC44 543 aa15.73■□□□□ 0.11
SKA1-202ENST00000398452 SPATA20Q8TB22 786 aa15.73■□□□□ 0.11
SKA1-202ENST00000398452 KIFAP3Q92845 792 aa15.73■□□□□ 0.11
SKA1-202ENST00000398452 SEL1LQ9UBV2 794 aa15.73■□□□□ 0.11
SKA1-202ENST00000398452 DOCK5Q9H7D0 1870 aa15.73■□□□□ 0.11
SKA1-202ENST00000398452 BRCA2P51587 3418 aa15.73■□□□□ 0.11
SKA1-202ENST00000398452 LOXHD1Q8IVV2 1947 aa15.72■□□□□ 0.11
SKA1-202ENST00000398452 SYNRGQ9UMZ2 1314 aa15.72■□□□□ 0.11
SKA1-202ENST00000398452 NPHP3-ACAD11A0A0J9YXS1 232 aa15.72■□□□□ 0.11
SKA1-202ENST00000398452 RRN3P2A6NIE6 340 aa15.72■□□□□ 0.11
SKA1-202ENST00000398452 ADCY6O43306 1168 aa15.72■□□□□ 0.11
SKA1-202ENST00000398452 HIP1RO75146 1068 aa15.72■□□□□ 0.11
SKA1-202ENST00000398452 GJB1P08034 283 aa15.72■□□□□ 0.11
SKA1-202ENST00000398452 HOXD8P13378 290 aaPredicted RBP15.72■□□□□ 0.11
SKA1-202ENST00000398452 PTGS1P23219 599 aa15.72■□□□□ 0.11
SKA1-202ENST00000398452 DNM2P50570 870 aa15.72■□□□□ 0.11
SKA1-202ENST00000398452 SMTNP53814 917 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms