RNA–Protein interactions for RNA: ENST00000397827.7

CHRFAM7A-202, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 5 BASIC

Gene CHRFAM7A, Length 2,794 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-202ENST00000397827 PARVGQ9HBI0 331 aa20.05■□□□□ 0.8
CHRFAM7A-202ENST00000397827 METTL14Q9HCE5 456 aaKnown RBP20.05■□□□□ 0.8
CHRFAM7A-202ENST00000397827 PCDHGC5Q9Y5F6 944 aa20.05■□□□□ 0.8
CHRFAM7A-202ENST00000397827 GRID2IPA4D2P6 1211 aa20.05■□□□□ 0.8
CHRFAM7A-202ENST00000397827 GGCXP38435 758 aa20.05■□□□□ 0.8
CHRFAM7A-202ENST00000397827 AARSP49588 968 aaKnown RBP eCLIP20.05■□□□□ 0.8
CHRFAM7A-202ENST00000397827 SND1Q7KZF4 910 aaKnown RBP eCLIP20.05■□□□□ 0.8
CHRFAM7A-202ENST00000397827 LDHDQ86WU2 507 aa20.05■□□□□ 0.8
CHRFAM7A-202ENST00000397827 FAM204AQ9H8W3 233 aa20.05■□□□□ 0.8
CHRFAM7A-202ENST00000397827 SLC16A3O15427 465 aaKnown RBP20.04■□□□□ 0.8
CHRFAM7A-202ENST00000397827 VIL1P09327 827 aaKnown RBP20.04■□□□□ 0.8
CHRFAM7A-202ENST00000397827 C8orf74Q6P047 294 aa20.04■□□□□ 0.8
CHRFAM7A-202ENST00000397827 LEKR1Q6ZMV7 388 aa20.04■□□□□ 0.8
CHRFAM7A-202ENST00000397827 PSD3Q9NYI0 1048 aa20.04■□□□□ 0.8
CHRFAM7A-202ENST00000397827 BCCIPQ9P287 314 aaKnown RBP eCLIP20.04■□□□□ 0.8
CHRFAM7A-202ENST00000397827 TSKSQ9UJT2 592 aa20.04■□□□□ 0.8
CHRFAM7A-202ENST00000397827 MRPL11Q9Y3B7 192 aaKnown RBP20.04■□□□□ 0.8
CHRFAM7A-202ENST00000397827 SHTN1A0MZ66 631 aa20.04■□□□□ 0.8
CHRFAM7A-202ENST00000397827 TRAF1Q13077 416 aa20.04■□□□□ 0.8
CHRFAM7A-202ENST00000397827 SLC15A2Q16348 729 aa20.04■□□□□ 0.8
CHRFAM7A-202ENST00000397827 MEI1Q5TIA1 1274 aa20.04■□□□□ 0.8
CHRFAM7A-202ENST00000397827 FIZ1Q96SL8 496 aa20.04■□□□□ 0.8
CHRFAM7A-202ENST00000397827 GMLQ99445 158 aa20.04■□□□□ 0.8
CHRFAM7A-202ENST00000397827 STIM2Q9P246 746 aa20.04■□□□□ 0.8
CHRFAM7A-202ENST00000397827 SPDYE2Q495Y8 402 aa20.03■□□□□ 0.8
CHRFAM7A-202ENST00000397827 FAM186BQ8IYM0 893 aa20.03■□□□□ 0.8
CHRFAM7A-202ENST00000397827 BORCS6Q96GS4 357 aa20.03■□□□□ 0.8
CHRFAM7A-202ENST00000397827 AGBL1Q96MI9 1066 aa20.03■□□□□ 0.8
CHRFAM7A-202ENST00000397827 CXorf56Q9H5V9 222 aa20.03■□□□□ 0.8
CHRFAM7A-202ENST00000397827 NAGPAQ9UK23 515 aa20.03■□□□□ 0.8
CHRFAM7A-202ENST00000397827 AGPSO00116 658 aa20.03■□□□□ 0.8
CHRFAM7A-202ENST00000397827 ALKBH5Q6P6C2 394 aaKnown RBP20.03■□□□□ 0.8
CHRFAM7A-202ENST00000397827 FAM178BQ8IXR5 827 aa20.03■□□□□ 0.8
CHRFAM7A-202ENST00000397827 FAM170AA1A519 330 aa20.02■□□□□ 0.8
CHRFAM7A-202ENST00000397827 IPO5O00410 1097 aaKnown RBP20.02■□□□□ 0.8
CHRFAM7A-202ENST00000397827 CYP2J2P51589 502 aa20.02■□□□□ 0.8
CHRFAM7A-202ENST00000397827 PLS1Q14651 629 aa20.02■□□□□ 0.8
CHRFAM7A-202ENST00000397827 ODR4Q5SWX8 454 aa20.02■□□□□ 0.8
CHRFAM7A-202ENST00000397827 MAEAQ7L5Y9 396 aa20.02■□□□□ 0.8
CHRFAM7A-202ENST00000397827 ZNF720Q7Z2F6 126 aa20.02■□□□□ 0.8
CHRFAM7A-202ENST00000397827 LXNQ9BS40 222 aa20.02■□□□□ 0.8
CHRFAM7A-202ENST00000397827 ZSCAN5CA6NGD5 496 aaPredicted RBP20.02■□□□□ 0.8
CHRFAM7A-202ENST00000397827 EIF3DO15371 548 aaKnown RBP eCLIP20.02■□□□□ 0.8
CHRFAM7A-202ENST00000397827 PSMC2P35998 433 aaKnown RBP20.02■□□□□ 0.8
CHRFAM7A-202ENST00000397827 CCDC91Q7Z6B0 441 aa20.02■□□□□ 0.8
CHRFAM7A-202ENST00000397827 NACC1Q96RE7 527 aa20.02■□□□□ 0.8
CHRFAM7A-202ENST00000397827 COL4A5P29400 1685 aa20.02■□□□□ 0.79
CHRFAM7A-202ENST00000397827 FRMPD4Q14CM0 1322 aa20.01■□□□□ 0.79
CHRFAM7A-202ENST00000397827 CAP2P40123 477 aa20.01■□□□□ 0.79
CHRFAM7A-202ENST00000397827 FOXR1Q6PIV2 292 aa20.01■□□□□ 0.79
CHRFAM7A-202ENST00000397827 BZW2Q9Y6E2 419 aaKnown RBP20.01■□□□□ 0.79
CHRFAM7A-202ENST00000397827 ANKRD65E5RJM6 399 aa20.01■□□□□ 0.79
CHRFAM7A-202ENST00000397827 GFPT2O94808 682 aa20.01■□□□□ 0.79
CHRFAM7A-202ENST00000397827 IVLP07476 585 aa20.01■□□□□ 0.79
CHRFAM7A-202ENST00000397827 GLI1P08151 1106 aa20.01■□□□□ 0.79
CHRFAM7A-202ENST00000397827 JAM2P57087 298 aa20.01■□□□□ 0.79
CHRFAM7A-202ENST00000397827 ESYT3A0FGR9 886 aa20■□□□□ 0.79
CHRFAM7A-202ENST00000397827 ITGB5P18084 799 aa20■□□□□ 0.79
CHRFAM7A-202ENST00000397827 INPP5BP32019 993 aa20■□□□□ 0.79
CHRFAM7A-202ENST00000397827 KCTD17Q8N5Z5 321 aa20■□□□□ 0.79
CHRFAM7A-202ENST00000397827 RDH13Q8NBN7 331 aa20■□□□□ 0.79
CHRFAM7A-202ENST00000397827 TEKT3Q9BXF9 490 aa20■□□□□ 0.79
CHRFAM7A-202ENST00000397827 COL20A1Q9P218 1284 aa20■□□□□ 0.79
CHRFAM7A-202ENST00000397827 GOLGA6BA6NDN3 693 aa20■□□□□ 0.79
CHRFAM7A-202ENST00000397827 TRIM49P0CI25 452 aa20■□□□□ 0.79
CHRFAM7A-202ENST00000397827 TRIM49CP0CI26 452 aa20■□□□□ 0.79
CHRFAM7A-202ENST00000397827 PRKCIP41743 596 aa20■□□□□ 0.79
CHRFAM7A-202ENST00000397827 EN1Q05925 392 aaPredicted RBP20■□□□□ 0.79
CHRFAM7A-202ENST00000397827 ZNF772Q68DY9 489 aaPredicted RBP20■□□□□ 0.79
CHRFAM7A-202ENST00000397827 TTLL6Q8N841 843 aa20■□□□□ 0.79
CHRFAM7A-202ENST00000397827 INPP4AQ96PE3 977 aaPredicted RBP20■□□□□ 0.79
CHRFAM7A-202ENST00000397827 WDR11Q9BZH6 1224 aa20■□□□□ 0.79
CHRFAM7A-202ENST00000397827 EHMT1Q9H9B1 1298 aa20■□□□□ 0.79
CHRFAM7A-202ENST00000397827 RBBP6Q7Z6E9 1792 aaKnown RBP20■□□□□ 0.79
CHRFAM7A-202ENST00000397827 KCNK3O14649 394 aa20■□□□□ 0.79
CHRFAM7A-202ENST00000397827 DGKZQ13574 1117 aa20■□□□□ 0.79
CHRFAM7A-202ENST00000397827 CBWD6Q4V339 395 aa20■□□□□ 0.79
CHRFAM7A-202ENST00000397827 CBWD3Q5JTY5 395 aa20■□□□□ 0.79
CHRFAM7A-202ENST00000397827 CBWD5Q5RIA9 395 aa20■□□□□ 0.79
CHRFAM7A-202ENST00000397827 KRT12Q99456 494 aa20■□□□□ 0.79
CHRFAM7A-202ENST00000397827 AGPAT3Q9NRZ7 376 aa20■□□□□ 0.79
CHRFAM7A-202ENST00000397827 CCPG1Q9ULG6 757 aa20■□□□□ 0.79
CHRFAM7A-202ENST00000397827 SRCAPQ6ZRS2 3230 aa19.99■□□□□ 0.79
CHRFAM7A-202ENST00000397827 NFIBO00712 420 aa19.99■□□□□ 0.79
CHRFAM7A-202ENST00000397827 FLOT1O75955 427 aa19.99■□□□□ 0.79
CHRFAM7A-202ENST00000397827 ZNF131P52739 623 aa19.99■□□□□ 0.79
CHRFAM7A-202ENST00000397827 GRIPAP1Q4V328 841 aa19.99■□□□□ 0.79
CHRFAM7A-202ENST00000397827 HS2ST1Q7LGA3 356 aa19.99■□□□□ 0.79
CHRFAM7A-202ENST00000397827 FAM160B2Q86V87 743 aa19.99■□□□□ 0.79
CHRFAM7A-202ENST00000397827 IL31RAQ8NI17 732 aa19.99■□□□□ 0.79
CHRFAM7A-202ENST00000397827 PPM1EQ8WY54 764 aa19.99■□□□□ 0.79
CHRFAM7A-202ENST00000397827 RNF14Q9UBS8 474 aa19.99■□□□□ 0.79
CHRFAM7A-202ENST00000397827 FEM1BQ9UK73 627 aa19.99■□□□□ 0.79
CHRFAM7A-202ENST00000397827 DDX3XO00571 662 aaKnown RBP eCLIP19.99■□□□□ 0.79
CHRFAM7A-202ENST00000397827 PPP1R12BO60237 982 aaPredicted RBP19.99■□□□□ 0.79
CHRFAM7A-202ENST00000397827 FMO5P49326 533 aa19.99■□□□□ 0.79
CHRFAM7A-202ENST00000397827 NBPF9Q3BBW0 867 aa19.99■□□□□ 0.79
CHRFAM7A-202ENST00000397827 C10orf76Q5T2E6 689 aa19.99■□□□□ 0.79
CHRFAM7A-202ENST00000397827 B3GNT9Q6UX72 402 aa19.99■□□□□ 0.79
CHRFAM7A-202ENST00000397827 TRMT1LQ7Z2T5 733 aaKnown RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms